Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00919 ATGGCTACCCAACAATCTCTGTTAGAGAAGCCGAGAAAATCTGTTTCCAAAACTATCTGTTTGATATTTTCTATAGCTGCTGTCATAAGCTCATCAGCCTTTATTGGTTCTTATCTCATCAAATCCACCTCTTTGTTGAACCACCATCTCTGTGATCATGCACTAGACAAGACATCATGTTTGGCACATGTTTCAGAAGTACTAGTACAAGGTGGTGCCCAGAAAAATCACAAATTCAATTTGCTACAGTCATTCCTAATGAAATCCACTTCACACATTGAGAGAGCCATCAACACAGCCAATTCTATCAAAGCTAGGATCAACAACCCCAGAGAGGAAGCAGCTTTGCACGACTGTGTGGAGCTGATGGAGTTATCCATGGACAGAGTTTGGGACTCAATGGTGGCTCTATCAAAACAAACTATTGAGTCTCAGCAAGATGCACACACATGGCTAAGTGGGGTTGAACAAATCATTGATGAAGGGCTAAATGGGGAGTTTCCATCATGGGTGAGCAACAGGGACCGGAGGCTTTTGGAGTCTACAGTTGGGGATATCAAGGCCAACGTTGTGGTGGCTAAAGATGGGAGTGGCAGGTTTAAGACAGTGGCTGAGGCTGTGGCATCCGCACCAGACAATGGTAAGAGAAGGTACGTTATTTATGTGAAAAAGGGGACATATAAAGAGAATGTCGAAATTGGTAAGAAGAAGACCAACGTGATGCTCATTGGAGATGGTAAGGATCAAACAGTCATCACTGGCAACTTGAATGTCATCGATGGATCTACCACATTTAAGTCTGCCACTGTTGCGGCTGTGGGAGACGGGTTTATAGCCCAAGACATATGGTTCCAAAACACAGCAGGCCCAGAGAAGCATCAAGCAGTGGCACTTCGCGTAGGAGCAGACCAATCCGTGATAAACCGATGTCGTATCGATGCATTCCAGGACACTCTCTACGCACACAGCAACAGGCAGTTCTACAGAGACTCCTTCATAACGGGCACCGTTGACTTCGTGTTCGGAAACGCAGCAGTGGTGTTTCAGAAATGTACCCTAGAAGCCCGAAAGCCCATGAACAACCAGAAGAACATGGTGACGGCCCAGGGGCGAGAGGACCCAAACCAGAACACAGGCACTTCAATCCAACAATGTTCCCTAACGCCAAGCCCAGATCTTAAGCCCGTGGTGGGGTCCATCAAGACGTATTTGGGCCGGCCTTGGAAGAAGTACTCAAGAACTGTTGTGATGCAGTCCTCATTGGATAGTCACATTGAGCCTGCAGGATGGGCTGAATGGGATGCTCAAAGTAAGGACTTTTTGCAAACACTGTATTATGGAGAATACTTGAATAGTGGGCCTGGTGCTGGTACCAGCAAGAGGGTTAATTGGCCTGGCTACCATGTTATCAAAAGTGCAGCAGAAGCAAGCAAATTCACAGTGACACAACTCATCCAAGGGAATGTTTGGTTGAAGAACACTGGGGTCAATTTCATTGAAGGCCTCTAG 1509 0.4645 MATQQSLLEKPRKSVSKTICLIFSIAAVISSSAFIGSYLIKSTSLLNHHLCDHALDKTSCLAHVSEVLVQGGAQKNHKFNLLQSFLMKSTSHIERAINTANSIKARINNPREEAALHDCVELMELSMDRVWDSMVALSKQTIESQQDAHTWLSGVEQIIDEGLNGEFPSWVSNRDRRLLESTVGDIKANVVVAKDGSGRFKTVAEAVASAPDNGKRRYVIYVKKGTYKENVEIGKKKTNVMLIGDGKDQTVITGNLNVIDGSTTFKSATVAAVGDGFIAQDIWFQNTAGPEKHQAVALRVGADQSVINRCRIDAFQDTLYAHSNRQFYRDSFITGTVDFVFGNAAVVFQKCTLEARKPMNNQKNMVTAQGREDPNQNTGTSIQQCSLTPSPDLKPVVGSIKTYLGRPWKKYSRTVVMQSSLDSHIEPAGWAEWDAQSKDFLQTLYYGEYLNSGPGAGTSKRVNWPGYHVIKSAAEASKFTVTQLIQGNVWLKNTGVNFIEGL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00919 502 ProSitePatterns Pectinesterase signature 1. 214 233 IPR018040 -
Pste1g00919 502 PANTHER PECTINESTERASE 28 492 - -
Pste1g00919 502 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 157 IPR035513 -
Pste1g00919 502 Gene3D - 183 502 IPR012334 -
Pste1g00919 502 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 177 IPR035513 -
Pste1g00919 502 FunFam Pectinesterase 183 502 - -
Pste1g00919 502 ProSitePatterns Pectinesterase signature 2. 333 342 IPR033131 -
Pste1g00919 502 SMART PMEI_2 41 207 IPR006501 GO:0004857
Pste1g00919 502 Pfam Plant invertase/pectin methylesterase inhibitor 49 156 IPR006501 GO:0004857
Pste1g00919 502 SUPERFAMILY Pectin lyase-like 187 501 IPR011050 -
Pste1g00919 502 MobiDBLite consensus disorder prediction 368 389 - -
Pste1g00919 502 Pfam Pectinesterase 189 488 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00919 Pste-Chr1 2860620 2862901 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00919 3 502 Carbohydrate Esterase AT1G11580 53.321 0.0 574