Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00918 CCAACCAATAACTCTTCTCTCTCTCTAATAGTAATTCATTTTATGATAGCATTAATGGTTAGTTGTTTGGTATTTGTTGTGAATGACTCCATGGTTCCCTCCTAGCTAGCCTCTATCTTTGTTAAACTTATGTTAAAGGTCCATATATCTTGAGGTCAAACTTCTTTAGCTAAAATGGAGATAGAAGCAGCCGCCACAGATAGCAACAACTGGGCTGCTATGGAGACCGAGATTCCATACACTGGCTTTGACAGAGGAAGCTTCTTGGCTTGGCAAGATCTCAGAGTTGTGCTGCCAAATTTTGGTAAGGGACCAACCAAGAGGTTGCTTAATGGCCTCAATGGCTATGCTGAGCCTGGTAGAATCATGGCTATTATGGGTCCTTCTGGCTCTGGAAAATCCACACTTCTTGATGCACTTGCAGGTAGACTCTCAAAAAATGTGGTTATGACAGGAAATGTTCTTCTTAATGGGAAGAAAAAAGGGTTGGGCTACGGTGTTGTGGCATACGTAACTCAAGAGGATGTGCTGCTGGGAACACTGACCGTGAAGGAGACCATATCTTACTCTGCCCATCTACGACTTCCAACAACAATGAGCAAAGAAGAAGTTAATAGCATAATCGATGGAACAATCATAGAAATGGGACTCCAAGACTGTGCTGATAGATTGATAGGTAACTGGCACTTGAGAGGTATAAGTGGAGGGGAGAAGAAGAGACTCAGCATTGCACTTGAGATTCTTACAAGGCCTAGCTTACTGTTCCTTGATGAACCCACCAGTGGCCTTGATAGTGCCTCTGCATTTTTTGTTGTTCAAACCCTTAGAAATGTTGCTCGCGATGGAAGGACGGTTATCTCTTCCATTCACCAACCCAGCAGTGAAGTCTTTGCTCTCTTTGATGACCTTTTCTTACTCTCTGGCGGCGAAACAGTTTATTTTGGAGAAGCAAAATCTGCAATTGAGTTTTTTGCTGAAGCTGGTTTCCCTTGTCCTCGTAAAAGGAATCCTTCTGATCACTTCCTACGATGTGTCAATTCTGATTTCGACATTGTGACAGCCACACTGAAGGGATCTCAAAGAATTCATGATATTCCAAATTCAGCAGATCCTTTCATGAATTTGGCCACAGCAGAGATTAAGGCAATGCTAGTTGAGAAATATAGGCGTTCAACATATGCGAAAAGGGCAAAAGACAGAATTCAAGAACTGTCTAGAGATGAAGGGCTTCAACCTCCGACACAACATGGAAGTGAAGCTAGTTGGAGGAAGCAACTGTCAACGTTGACAAAGAGATCATTTGTGAACATGTGTAGAGATGTGGGTTACTACTGGTTGAGGATCATAATTTACATAATTGTATCCATATGTGTGGGAACCGTTTACTTTGATATTGGCTATAGCTACACTTCTATCCTGGCCCGTGGTGCCTGCGGTGCATTTATATCAGGATTTATGACATTCATGTCAATTGGGGGCTTTCCATCATTTATCGAAGAAATGAAGGTATTTTATCGAGAAAGGCTTAACGGATACTATGGAGTCGCAGCATATATATTAGCCAACTTCCTTTCTTCTTTCCCATTCTTGGTTGCAATAGCTCTTACTACTAGCACCATAACGTATAACATGGTGAAATTCAGGCCAGGAATAAGCCATTTTGTGTTTTTCACTCTCAACATCTACAGCTGCATCTCCGTAATAGAGAGCCTGATGATGGTTGTAGCTTCACTTGTTCCAAATTTCCTAATGGGAATAATTACAGGAGCTGGAATAATTGGAATAATGATGATGACCTCTGGATTCTTCAGGTTGCTATCTGATCTTCCAAAGCCGGTGTGGCGCTATCCAATTTCATATATCAGTTATGGTTCCTGGGCAATACAGGGTTCCTACAAGAACGACTTGCTTGGGCTAGAGTTTGATCCTCTGCTACCTGGTGACCCAAAATTGACTGGAGAATACGTGATCACACACATGTTAGGCATTGAATTAAACCATTCCAAGTGGTGGGACTTAGCAGCTCTATTTGTGATTCTCATATGTTACAGACTTCTCTTCTTTACTGTTCTCAAGTTCAAGGAGAGAGCATCCCCATTGTTTCAGACACTTTATGCCAAGCGAACCATCCAACAGCTTGAAAAAAGACCCTCTTTCAGGAAAATACCATCTTTCCCTTCCCAGAGGCATCAACCCCTCTATTCACTTTCTTCTCAAGACGGTCTCGATTCTCCACTCCACTAAATCAATATCCACCACAAATAAACGTGTTGCATGCAGCTCCACTTTGCTTAACATACAAAATTGTATTTCTTATCTGTTACCATATGTATAGAGAAATTGTTTCATAACAGTTTAAGGTACAAACAGACATATGGGACATTGTCTACGTCCTTCCATTACATTTTTTTTTTTCAATTAAAATCTCTAAATTGGGATAATTACTTTGTACAAATGCATGTATCTCTACTGAACATTTCAGGTTCAAACTTTTCATAGATGAATACCTGCATGAACGAAGTCCATAAGATAATGATAACTACAAGAAATTTATCGG 2557 0.4083 MEIEAAATDSNNWAAMETEIPYTGFDRGSFLAWQDLRVVLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDALAGRLSKNVVMTGNVLLNGKKKGLGYGVVAYVTQEDVLLGTLTVKETISYSAHLRLPTTMSKEEVNSIIDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPSLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKSAIEFFAEAGFPCPRKRNPSDHFLRCVNSDFDIVTATLKGSQRIHDIPNSADPFMNLATAEIKAMLVEKYRRSTYAKRAKDRIQELSRDEGLQPPTQHGSEASWRKQLSTLTKRSFVNMCRDVGYYWLRIIIYIIVSICVGTVYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILANFLSSFPFLVAIALTTSTITYNMVKFRPGISHFVFFTLNIYSCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGSWAIQGSYKNDLLGLEFDPLLPGDPKLTGEYVITHMLGIELNHSKWWDLAALFVILICYRLLFFTVLKFKERASPLFQTLYAKRTIQQLEKRPSFRKIPSFPSQRHQPLYSLSSQDGLDSPLH 689
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00918 689 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 25 658 - -
Pste1g00918 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 267 IPR027417 -
Pste1g00918 689 Gene3D - 32 269 IPR027417 -
Pste1g00918 689 Pfam ABC transporter 52 203 IPR003439 GO:0005524
Pste1g00918 689 MobiDBLite consensus disorder prediction 663 689 - -
Pste1g00918 689 CDD ABCG_EPDR 28 257 - -
Pste1g00918 689 Pfam ABC-2 type transporter 367 576 IPR013525 GO:0016020|GO:0140359
Pste1g00918 689 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 275 IPR003439 GO:0005524
Pste1g00918 689 Pfam ABC-2 type transporter 232 288 IPR043926 GO:0140359
Pste1g00918 689 MobiDBLite consensus disorder prediction 666 689 - -
Pste1g00918 689 SMART AAA_5 61 232 IPR003593 GO:0016887
Pste1g00918 689 ProSitePatterns ABC transporters family signature. 175 189 IPR017871 GO:0005524|GO:0016887
Pste1g00918 689 FunFam ABC transporter G family member 11 25 269 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste1g00918 Pste-Chr1 2853339 2858739 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00918 47 244 Calmodulin-binding Proteins AT2G36910 30.622 3.17e-11 65.1