Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00899 CGAACAACAATACAAGCCCTCACCTCACATGAAACATTTGAATTGTCCATGATGGAGGCGGCCATGAAATTACGGCTTTCTTACCACAGAACAGAATGAGGTGTGAATGCAACAGCAGCCAGCATGAGAGGGAAACAGCAGCGTGCAACCGAATCCGTTCACCACAATATGGGCCCGCCAAACCACCGCAGGCCCGCAGGTAGGAACCGAGGCCCGCAAAATGACTATCCCAAAATACCGTGTGGTGAACAAACCCGAACCGGTTCCTTCTTCCAGCTCTCATTCCGTCGAGGAAGTCAATGTCACGCCACAGAATCGCGATAAAGGGGACGGTGGTGCTGCCTCTCAGCTCCACACCGTTGACGATGCCCATCGCGTGGCTAGTTCAAGCAAGGCCGACCGAGGAGACGGTAGTGATGATGATGTTCAGGCTAGGCTTGTTAAGTTGCTCAGTAAAATCGAGGAACCTGAATTGTCTCCGGAGCAGATCAGAATCAACGATCAATTGCAGCAAGACGAGATACTGGTGGTGGAGTCAATTTATGGAGAAAACTTTTTCAGCCTTGAGAGGTGGAAAGGTCTGCGATGTTTTCAGATACATGTACACATTGATGTTTTGGGTGAAGTTGCCATCACTACTAAGTTGAACTCTCTTAATCAACTTGAGACTGTAAGCAGCAACTCAAATGATTTCTTATACTCTTTCAAAGTCCATTATATTCCTCCAATTCCACACAATGCCTATTTTACTCTCTCTGTTAAATGGTTGGAGCCCATGAAGATTCAGAATCTGTGCTCGAAGTTGGATTCAATATGGGAAGAACAGCAGGGTCAGGAAGTGATTTACCCTTGGGTAGAATGGTTACATGGTTCTTCTCTTTCTCATCTGGGATTTGACGAGGAAATCATGCTTGGGCCTTATGGCATGAATTGTGTCCAAGATGAGCGTGTTATTTCAGGAGCTGACTGCATTGATGTTGATATTCCTTTTTTACAAAGTTACAACAATCAGAGACACAATGAGAACTTCCTCAAAGAATTGCATCAATGTAACATCTGCTTTAGTGAATATGCAGGCTCTGAGTTTATACGGTTACCATGTAAGCATTTTTTTTGCCTCAAATGCTTGCAGACCTTTGCCCAGATACATGTAAAGGAAGGCACTGTTAGTAATCTTCAATGTCCCGAAGCAAAATGTGCAGTTATGATTCCACCTGGCCTTTTAAAACACTTACTGGATGACACAGATTATGAGCGCTGGGAATCCATGATGTTGGAAAAAACACTTGCATCAATGTCTGATGTTGTTTATTGTCCAAGATGTGAAACACCCTGTATAGAGGATGAAGGCCAGCATGCTCAATGCCCAAAATGTTATTTTAGCTTTTGCACCCTTTGCAGCGAACGGCGTCATGTTGGCATAGCATGCATGAGTCTAGATTTGAAGCTTCAGATTTTGCAGGATCGTCAAAATTCGTCTGAATTAAAGGTAGATCAAAAGCGTAGGGAACGTGAAAAGATCAATGAAATTCTCAGTATGAAAGAAATTCATCGCGATTCCAAGTTGTGCCCTTCTTGTGACATGGCAATTTCTCGAACTGAAGGTTGTAACAAAATGAAATGTGGTAATTGTGCACAATATTTCTGTTACCGCTGCAATAAAGCAATTGATGCATCAGATCCATATGGACATTTCAGAGATGGTTCATGCGAATTGTTCCCGCCAGAAATGGTTGATTTCTGGGAAGAGCGCTTAAATCATCGCCAGGTGGTAGGACGATTACAGGTTGATCTCTTGCATCAACATATAGCGGCATGTCCTAATTGTCGTCAATATAATTACTTACAAAAATATGACATCGAAATTGGAAATAATAATCACTTGTTTTGCTGGTCATGCCAAAGCCATTACTGCTACTTATGCAAAAAGATTCTCAGGCGTGGCACTAAGCATTATGGACCAAAGGGCTGCAAACAGCACTCCGAGGGATAGAATAAGGCAATATGCACGATTCCTTGGAATGCTGTTTTTTTTAATTTATTTTTGGCATCGTGTAACGCAATAGATTCTTCCAGATTGGTGAAGCCACCGTGATTCAATGGAAAAGGTGGAAACCATCTGCTAAATGTCCTGTGAGTTTCAAATTTCAATTGTATCTGCAGTAAAATAAAATACATATAAATAGGATGTGTTTCAGTTATATTTGGGTTCTGGAGGATATAAATGTTTAGTTTTGCGGCTGTAATGGGGGTAAATCTTGGGCAATATTTTTTGTTTTGAAAATATTCTCTACCTCAAACTCAAATATATAGTCTTTTTTGCGAAGAAATATTACTACTTTATGGTTGTATTGGAG 2357 0.4162 MTIPKYRVVNKPEPVPSSSSHSVEEVNVTPQNRDKGDGGAASQLHTVDDAHRVASSSKADRGDGSDDDVQARLVKLLSKIEEPELSPEQIRINDQLQQDEILVVESIYGENFFSLERWKGLRCFQIHVHIDVLGEVAITTKLNSLNQLETVSSNSNDFLYSFKVHYIPPIPHNAYFTLSVKWLEPMKIQNLCSKLDSIWEEQQGQEVIYPWVEWLHGSSLSHLGFDEEIMLGPYGMNCVQDERVISGADCIDVDIPFLQSYNNQRHNENFLKELHQCNICFSEYAGSEFIRLPCKHFFCLKCLQTFAQIHVKEGTVSNLQCPEAKCAVMIPPGLLKHLLDDTDYERWESMMLEKTLASMSDVVYCPRCETPCIEDEGQHAQCPKCYFSFCTLCSERRHVGIACMSLDLKLQILQDRQNSSELKVDQKRREREKINEILSMKEIHRDSKLCPSCDMAISRTEGCNKMKCGNCAQYFCYRCNKAIDASDPYGHFRDGSCELFPPEMVDFWEERLNHRQVVGRLQVDLLHQHIAACPNCRQYNYLQKYDIEIGNNNHLFCWSCQSHYCYLCKKILRRGTKHYGPKGCKQHSEG 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00899 590 MobiDBLite consensus disorder prediction 13 29 - -
Pste1g00899 590 SUPERFAMILY RING/U-box 272 356 - -
Pste1g00899 590 FunFam RBR-type E3 ubiquitin transferase 272 356 - -
Pste1g00899 590 SUPERFAMILY UBC-like 93 216 IPR016135 -
Pste1g00899 590 SUPERFAMILY RING/U-box 525 587 - -
Pste1g00899 590 Coils Coil 410 430 - -
Pste1g00899 590 ProSitePatterns Zinc finger RING-type signature. 294 303 IPR017907 -
Pste1g00899 590 CDD RING-HC_ITT1-like 271 330 - -
Pste1g00899 590 Pfam IBR domain, a half RING-finger domain 440 483 IPR002867 GO:0008270
Pste1g00899 590 Pfam IBR domain, a half RING-finger domain 345 403 IPR002867 GO:0008270
Pste1g00899 590 SMART RWD2001b 99 222 IPR006575 GO:0005515
Pste1g00899 590 FunFam RBR-type E3 ubiquitin transferase 418 528 - -
Pste1g00899 590 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 360 IPR013083 -
Pste1g00899 590 Pfam RWD domain 95 216 IPR006575 GO:0005515
Pste1g00899 590 SUPERFAMILY RING/U-box 345 406 - -
Pste1g00899 590 Gene3D - 418 516 - -
Pste1g00899 590 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 177 487 IPR031127 GO:0004842|GO:0016567
Pste1g00899 590 Gene3D Ubiquitin Conjugating Enzyme 87 223 IPR016135 -
Pste1g00899 590 MobiDBLite consensus disorder prediction 1 67 - -
Pste1g00899 590 SUPERFAMILY RING/U-box 437 492 - -
Pste1g00899 590 CDD BRcat_RBR_RNF14 356 409 - -
Pste1g00899 590 Pfam zinc-RING finger domain 276 322 IPR001841 -
Pste1g00899 590 SMART ibrneu5 345 403 IPR002867 GO:0008270
Pste1g00899 590 SMART ibrneu5 432 497 IPR002867 GO:0008270
Pste1g00899 590 MobiDBLite consensus disorder prediction 51 67 - -
Pste1g00899 590 ProSiteProfiles TRIAD supradomain profile. 273 503 IPR044066 -
Pste1g00899 590 ProSiteProfiles Zinc finger RING-type profile. 277 325 IPR001841 -
Pste1g00899 590 SMART ring_2 365 453 IPR001841 -
Pste1g00899 590 SMART ring_2 533 568 IPR001841 -
Pste1g00899 590 SMART ring_2 277 324 IPR001841 -
Pste1g00899 590 CDD Rcat_RBR_RNF14 435 500 IPR047548 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00899 276 490 C3H Transcription Factor Family AT2G31760 26.244 8.04e-17 81.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00899 1 2782239 2793581 Pste1g00899 1 2782239 2793581 ECH