Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00884 TCAGTTTCTCACTCTTCCCTCACTTTAACCAAAAACGGTAACTTTGATCCAAACCCCACCTTTCTTTTATAGAACCGTTCAAATCTATTCTTCTTTTTTCTCACTCTCTACTCTCCTCAAATCTCAATCTTCATAACATTCACCCATTGGAGTTGTAGGGTTTCCTGCCTTTTCTATTTATTTTGATGCTTGAGTTCTGTGGTTTCTAAAGCATTGACATGGGGAAAGGAAGAAGTCCTGGGAAATGGTTCAAGAACTTACTCTTGGGTAAGAAATCGTCCTCAAAGTCTACTTCGTCTAAGAAAAACGATATTTTGAAATCTTCAAGTGACAAGAATGCTCTGGTGTCTTCTGAGGTACATGTGTCTGATTCAACTGTGGATTCTCTGCTGATATCTGCACCAATATCTGGAGCTAATGACACTAAAGGAATCCTTTCAGAAAAGGAGGTAGTTAGTAGGTCATCACATGATAAGGATGTTCTTTCAGCTGGAGATGAAGAATCAAAGGTGCAAAATGCTGCTAATTTTGAATCTCAGGAGGATCTTGAGAAACTCCAATTTACGGAAGCGGCTATAAAAGTTCAGGCTGCTTGTAGAAGCTATCTGGCTCGTCAAGCATTTCAAACACTAAAAGGTGTCATACAAATGCAAGCCCTTATTCGTGGCCACTTGGTTAGAAGACAAGCTGTTTCTGCTTTATACTGTGTGAAGGGATTAGTCAAGTTTCAAGCATTGGCTCGTGGTTACATTGTTAGACGTTCTGATATTGGGCTTGCTGTCCAGAAAATTTGTAAGGATACTCGTTCAATTTCTGTTCGAGTAGTTTCATCCATACAGGAAGAGAAGGTGTCTGAAAATGTCTTTGTTTGCAAGCTTCTGGCTTCATCCCCATATGCAGTTCCTCTATTGCTCAACAGTGATCCAGGAGAACCTAGCATGGCTTGGAGGTGGCTTGACTATTGGACACGGTCACACTTTTGGGCACCTCTTCCTGAATTGAAAATGAAACTTGACCCAGTGTCTGGCGAGAAAAGTGGTAGTTCTCAGAAAGTTCTAAAGGGACAGGTTAAAAAAAATCCTCGTAAATCTCCAGCTGCGAAAGCTGACAATGGCTCAGATTCAGGTTCTAACAAATATAAACATCGCCCAAAAAAGGACTCAAGCCACCCATTGCCTTCGGCTCAGGAAAACCCACAAAAAGAAACCGAGAAAAGTAGTTTTGAAAAAACTCACGTGCATAATGTTTCAAATGGATCTGAGGTTGTTAATGGAAAAAGAAAACCCAACAATAAAAAGATTTTGGATCATGCTGTAACTGATGTTTCAGAGCAGGGTTTAAATGTCTCTTCAGAGAAAAAGAAAGATTCAACCATGTCGAAGTCAAAAGAGTTTGATCCTGAGAAAGGTCAAGGACAGCAAGCAAAAGAGAAGAATGATAATGAGCCACATAATGATCCTGTTGCTGTTTTAAATATTAGTTTGAAGAAGGGTGAAAATGAAAAGGTTCCAGGAGTCAGTGAGGATTTGAATGGTGGTGACAGTTGTATCAGTATTAACAATTGCCAAAGAAGAGCTTCGCTACCTGCTAACTTTAATGATCAAGATAATGAGTTATATAACACTCCTATTACTCCAAGACTGCCCAGTTATATGGCTCCTACTGAGTCTGCAAAAGCTAAGCTAAGAGCACAAGGCTCCCCAAGATTTGCTACTGATTTGGTAGAAAAAAACAGTACAACCAGGCGGCATTCTCTTTCATCCTCACTTAATGGCAAGTCAGGTTCATTTTCCCCAAGAGCTGAAAGGCTGATGGCTGTGAGTGGCAGAGGAGGAGTAAGGTCCGACAGATCTTTGTCGTCTTCAAGGGATGGAACTGAGAAGTTGACCCAACCTCAGTGGAGAAGAAGCCAACATGACATGCTTGGTGATGAAAGAATGAAGAATGCTTGTCAAAATTTTCGACGCGGATCATCACCTTGTCATTTGTTAACATGA 1997 0.4066 MGKGRSPGKWFKNLLLGKKSSSKSTSSKKNDILKSSSDKNALVSSEVHVSDSTVDSLLISAPISGANDTKGILSEKEVVSRSSHDKDVLSAGDEESKVQNAANFESQEDLEKLQFTEAAIKVQAACRSYLARQAFQTLKGVIQMQALIRGHLVRRQAVSALYCVKGLVKFQALARGYIVRRSDIGLAVQKICKDTRSISVRVVSSIQEEKVSENVFVCKLLASSPYAVPLLLNSDPGEPSMAWRWLDYWTRSHFWAPLPELKMKLDPVSGEKSGSSQKVLKGQVKKNPRKSPAAKADNGSDSGSNKYKHRPKKDSSHPLPSAQENPQKETEKSSFEKTHVHNVSNGSEVVNGKRKPNNKKILDHAVTDVSEQGLNVSSEKKKDSTMSKSKEFDPEKGQGQQAKEKNDNEPHNDPVAVLNISLKKGENEKVPGVSEDLNGGDSCISINNCQRRASLPANFNDQDNELYNTPITPRLPSYMAPTESAKAKLRAQGSPRFATDLVEKNSTTRRHSLSSSLNGKSGSFSPRAERLMAVSGRGGVRSDRSLSSSRDGTEKLTQPQWRRSQHDMLGDERMKNACQNFRRGSSPCHLLT 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00884 592 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Pste1g00884 592 MobiDBLite consensus disorder prediction 375 411 - -
Pste1g00884 592 Pfam IQ calmodulin-binding motif 139 156 IPR000048 GO:0005515
Pste1g00884 592 Pfam IQ calmodulin-binding motif 116 136 IPR000048 GO:0005515
Pste1g00884 592 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Pste1g00884 592 MobiDBLite consensus disorder prediction 489 592 - -
Pste1g00884 592 MobiDBLite consensus disorder prediction 556 578 - -
Pste1g00884 592 MobiDBLite consensus disorder prediction 302 317 - -
Pste1g00884 592 Pfam Protein of unknown function (DUF4005) 462 542 IPR025064 -
Pste1g00884 592 MobiDBLite consensus disorder prediction 17 40 - -
Pste1g00884 592 PANTHER IQ-DOMAIN 5-RELATED 1 519 - -
Pste1g00884 592 ProSiteProfiles IQ motif profile. 165 190 IPR000048 GO:0005515
Pste1g00884 592 MobiDBLite consensus disorder prediction 16 40 - -
Pste1g00884 592 MobiDBLite consensus disorder prediction 508 523 - -
Pste1g00884 592 Gene3D - 114 161 - -
Pste1g00884 592 SMART iq_5 137 158 IPR000048 GO:0005515
Pste1g00884 592 SMART iq_5 162 184 IPR000048 GO:0005515
Pste1g00884 592 SMART iq_5 114 136 IPR000048 GO:0005515
Pste1g00884 592 MobiDBLite consensus disorder prediction 541 555 - -
Pste1g00884 592 MobiDBLite consensus disorder prediction 267 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00884 Pste-Chr1 2722640 2728756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00884 4 563 IQD Protein Family AT1G14380 33.887 1.84e-81 265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00884 1 2722640 2728756 Pste1g00884 1 2722640 2728756 ECH
Pste1g00884 1 2722640 2728756 Pste6g02526 6 12507449 12517024 ECH
Pste1g00884 1 2722640 2728756 Pste6g02526 6 12507449 12517024 PCT