Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00882 GAGAGAAGACATAAACAAGCTCTAAGGCTTTCCTTACCAAAACCTCCTCCTACAATTCTATCATCAGATTTCCCACACCAAATTCACATACCAGCAGTGTCACCATCCACACCTTCCCATGTAGATTCTTCTCCAGTTGTCATCAAGGCCCTTTCGGACCTTGAGAAACAAGCAGTTATTGGCCATGGCAATGGTGGCACAGTCTACAAAGTTTATCACAAGAAGAGCCGTTCCTTTTATGCGTTGAAAGTCCTACGCTTGAATGAGAATGGCATTGGCATTGGCATCCGCCAGCCCGCTGCACTCGAAGCTGAGATTCTAAAACGAGTTAATTCACCGTATATAGTAAAGTGTCATGCAGTTTTTGATCATGGTATTTGCATTGAAGGTGACAATGGAGGTGACATAAGCTTTGTTATGGAATACATGGAAGGAGGGTCGTTGCATGATGTACTGCGCCAACATCGTAGACTGCCAGAAGAGGTGATCTCGGTGTTGGCTAAGCGTGTCTTGCAAGGACTTAAATATTTGCAGAGCATGCACGTTGTGCATAGAGATATTAAGCCCTCAAACTTGCTTGTGAATGACAAGGGTGAGGTGAAGATTGCAGATTTTGGAGTGAGTCATGTGGTTGAAGGCAAGTTTGAGGGCAGCGATGACAATGCAGGCACGTGTGCCTACATGAGTCCGGAAAGGGTTGATCCAGATAGATGGAGTGGTGCTAATGCAGATGAGTTTGCAGGAGATGTTTGGTCTATGGGAGTGGTTATGTTAGAATGTCTTTTGGGTTATTTTCCATTGCTAGGTCCAGGACAGAAACCTGATTGGGCAACTTTGATGTGTGCAATTTGCTTTGGGGAGAAGCTGGAGATGCCAGAAAAGGCATCGTCACAGTTCCAAAATTTTGTGAGGAGGTGTCTTGAGAAGGATTGGAGGAAGAGAGCTACAGTGTTCGAGCTTCTTCATCACCCTTTTACCATCATGAAAGGTATAGAGTTGGATTCTTGAAGCAGGTAGAAATAATCTCATGGCTTAAAAGTTGGAAATTAGAACGTCAATAATTTTGAGAACTTGCAGCATACCTGGTGATTACTGGTACCGCGCCTAACAAATTTTAATGGGGCGTTCACAATTACCATTGCCTTGGTTGCTGTATAGAATACACAAAAAGTGTTCCCATAAAGTATATGCTCCATGTTCTTTTAGGTGTTGAAATTGAAG 1221 0.4349 ERRHKQALRLSLPKPPPTILSSDFPHQIHIPAVSPSTPSHVDSSPVVIKALSDLEKQAVIGHGNGGTVYKVYHKKSRSFYALKVLRLNENGIGIGIRQPAALEAEILKRVNSPYIVKCHAVFDHGICIEGDNGGDISFVMEYMEGGSLHDVLRQHRRLPEEVISVLAKRVLQGLKYLQSMHVVHRDIKPSNLLVNDKGEVKIADFGVSHVVEGKFEGSDDNAGTCAYMSPERVDPDRWSGANADEFAGDVWSMGVVMLECLLGYFPLLGPGQKPDWATLMCAICFGEKLEMPEKASSQFQNFVRRCLEKDWRKRATVFELLHHPFTIMKGIELDS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00882 335 CDD PKc_MAPKK_plant_like 52 325 - -
Pste1g00882 335 FunFam Mitogen-activated protein kinase kinase 1 33 144 - -
Pste1g00882 335 ProSiteProfiles Protein kinase domain profile. 54 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00882 335 SUPERFAMILY Protein kinase-like (PK-like) 50 326 IPR011009 -
Pste1g00882 335 Pfam Protein kinase domain 55 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00882 335 Gene3D Phosphorylase Kinase; domain 1 40 140 - -
Pste1g00882 335 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 40 328 - -
Pste1g00882 335 PRINTS Tyrosine kinase catalytic domain signature 248 270 IPR001245 GO:0004672|GO:0006468
Pste1g00882 335 PRINTS Tyrosine kinase catalytic domain signature 176 194 IPR001245 GO:0004672|GO:0006468
Pste1g00882 335 PRINTS Tyrosine kinase catalytic domain signature 140 153 IPR001245 GO:0004672|GO:0006468
Pste1g00882 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Pste1g00882 335 SMART serkin_6 54 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00882 335 ProSitePatterns Protein kinases ATP-binding region signature. 60 83 IPR017441 GO:0005524
Pste1g00882 335 Gene3D Transferase(Phosphotransferase) domain 1 141 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00882 Pste-Chr1 2717496 2718813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00882 1 325 MAP Kinase Kinase Gene Family AT1G32320 51.692 3.00e-108 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pste1g00882 Pkinase 1.5e-59 CL0016