Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00873 AAAATGAAGAATCTCTTTATTTCTTTGTACAACTTGTTTCCTGTAATGATTCTTGTGCTGCTTTCTCTAATCCCCAGTGCACAACTAACGACAAGTGAGAACAGAATCCTTCTGAGAGTTCAGAAGCTCCTTGAATATCCTCAAGCTCTTCAAGAATGGACCAACATGACCAACTTCTGCTCCCTCTCTCCCTCAGCTTCTCTCAACATTGTGTGCTCCGATGGCCATGTAACAGAGTTAAGCATCATTGGGAACAAGACCTCCTCTTCTGCTTACAGAACCCAACAACTTGTATCTTGGAATTCATCTGAGACTCTCTCAGAAAGATTCTCCATCCAGACTTTCTTTACTGTCTTGACAAAGCTTTCAAATCTGAAGGTGTTGTCATTGGTATCACTTGGTTTGTGGGGTCCTTTATCTTCCAAGATTGACAGGCTCCGGCATCTTGAAGTGCTGAACATTAGCTCAAACCTCATTTATGGGCAAATACCATCATCAATCACCTCTTTGAAAAGTCTCAGGAGTCTTGTTTTGGCTGATAATCATTTCAGTGGGAGTGTGCCTGATCTTGGAAGACTGGTTTCTCTTGCAGAGCTCAATTTGAGTGGCAACAAATTGGGTCCTGAATTCCCTTCACTGAGCAAGAATCTTGTGAGGGTTGTCTTGAGCAACAACTCTTTGAGATGTAGAATTCCTCTCCAACTCATTCATGTTTATAAACTTCAGCTATTTGACATCTCTTCCAATGCAATATCTGGAAATATCCCATCATTTATTTTCTCTCTTCCTTTCCTAAAGTACCTAAACTTGGCTGCAAACCAACTAAATGGTTCCCTTTCTATGAATGTATCATGTAGTTCTGCTCTGACATTTATTGATATCTCACACAACCTCTTGGTGGGAACATTGCCATCTTGTCTTGCTTCAAAGGCTTTAAACCGAACAGTACTTTATTCTGGGAATTGTTTGTCAGCCAGAAGCTCAAATGATCAACATCAATCTTCTTATTGCCAGAAAGTGGAGGCCTTAGCTGTTAAGCCTTCAATTAGAAGCCAGAAGGAGTCAGAGGTACAACTAGGACTAATACATGGAATAATTGGAGGTGTTGTGGGAATCTCTGGGCTTCTGGTTCTTTTATTTCTGTGCATCTTCAGAAAGTTCAGGCCAGAAAAGGCAGACAGTAATTATAACATAGGCATCTCTGCTGCTGATAAACTTTCTGTCCATGCATATCCAAGACCAAATACTAATGCAAGACGTGTTCCTCTGCCAAGGAGGCGATCAGTTCTTGGATTCCCACCATACTGCAATTTCTCATTAGAAGAAATTGAAGATGCTACAAACAACTTTGACCCATCAAATCTTATAGCACAAGGATCACAGCGACAGCTATATAAAGGTTGGCTCATAGATGGTTCAATGGTCATGGTTAATCATGTTAAGCTAAAGCAGAAGAGTTTGCACAAAAACAATATTCAGAGCTTGAAGGTATTACCCTATTTAAGGCACAGACATATAGTGAGTGTGCTAGGACACTGTGTCGTTACTCATCAGGACCGTCCCCAAATGATAAGCACAATATTCATTGTATTTGAACATGTCTCAAACATGTCATTGAGGGATTACCTTGCAGATACGAGAAGAAAGGAAATGTTGAAATGGCCACAAAGAATGGCAATCTGCATAGGCATTGCAAGAGGAATCCAGTTCTTACACACTAGAGTTCATCATGGCATATTTGGCAACAATATAAAGATTGAGAATATTCTGTTGGATGATAGCCTCGATGCAAAAGTTAGTGGATACAGCATTCCATGGCCATCCAAGGTTAGAATTAAAACAGAATACATCACCAACAATGCAGAAAAGGAAGACATCTATCAGTTTGGTGTTATTCTACTTGAAGTTATTACTGGCAAACTAATTACATCTTCCAGTGAAGTAGAGAAGCTGAAGGATGAGATGGAGAGATGTTTAGCTGCATCACCATCACTAAGGGATGCATCACCAATACTAAAGGGTTTGTCCGATTCTACCATCCAGGAGACTAGTGTGTATGAATCATTGAGAACTGCAGTTCAGATAACCATCAGTTGTCTCAACAAGGTTTCCAGTAACTGCCCTTCAATGGAGGATATTCTCTGGAATTTGCTGTACTCCATGCAAGTTCAAGAGCCAAGGATCAGTGATTTAAACCTCTTTACTAAAATGTAA 2214 0.402 KMKNLFISLYNLFPVMILVLLSLIPSAQLTTSENRILLRVQKLLEYPQALQEWTNMTNFCSLSPSASLNIVCSDGHVTELSIIGNKTSSSAYRTQQLVSWNSSETLSERFSIQTFFTVLTKLSNLKVLSLVSLGLWGPLSSKIDRLRHLEVLNISSNLIYGQIPSSITSLKSLRSLVLADNHFSGSVPDLGRLVSLAELNLSGNKLGPEFPSLSKNLVRVVLSNNSLRCRIPLQLIHVYKLQLFDISSNAISGNIPSFIFSLPFLKYLNLAANQLNGSLSMNVSCSSALTFIDISHNLLVGTLPSCLASKALNRTVLYSGNCLSARSSNDQHQSSYCQKVEALAVKPSIRSQKESEVQLGLIHGIIGGVVGISGLLVLLFLCIFRKFRPEKADSNYNIGISAADKLSVHAYPRPNTNARRVPLPRRRSVLGFPPYCNFSLEEIEDATNNFDPSNLIAQGSQRQLYKGWLIDGSMVMVNHVKLKQKSLHKNNIQSLKVLPYLRHRHIVSVLGHCVVTHQDRPQMISTIFIVFEHVSNMSLRDYLADTRRKEMLKWPQRMAICIGIARGIQFLHTRVHHGIFGNNIKIENILLDDSLDAKVSGYSIPWPSKVRIKTEYITNNAEKEDIYQFGVILLEVITGKLITSSSEVEKLKDEMERCLAASPSLRDASPILKGLSDSTIQETSVYESLRTAVQITISCLNKVSSNCPSMEDILWNLLYSMQVQEPRISDLNLFTKM 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00873 737 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 217 342 - -
Pste1g00873 737 Gene3D Transferase(Phosphotransferase) domain 1 534 730 - -
Pste1g00873 737 Gene3D Phosphorylase Kinase; domain 1 425 523 - -
Pste1g00873 737 Gene3D Ribonuclease Inhibitor 30 216 IPR032675 -
Pste1g00873 737 SUPERFAMILY L domain-like 76 326 - -
Pste1g00873 737 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 353 727 - -
Pste1g00873 737 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 534 732 - -
Pste1g00873 737 ProSiteProfiles Protein kinase domain profile. 450 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00873 737 Gene3D Ribonuclease Inhibitor 217 347 IPR032675 -
Pste1g00873 737 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 30 215 - -
Pste1g00873 737 SUPERFAMILY Protein kinase-like (PK-like) 429 717 IPR011009 -
Pste1g00873 737 Pfam Protein tyrosine and serine/threonine kinase 457 639 IPR001245 GO:0004672|GO:0006468
Pste1g00873 737 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 424 523 - -
Pste1g00873 737 Pfam Leucine rich repeat 147 206 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00873 Pste-Chr1 2689005 2692875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00873 27 652 Miscellaneous Gene Families AT2G02780 48.851 3.73e-174 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pste1g00873 PK_Tyr_Ser-Thr 3.6e-12 CL0016