Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00866 TTATGTTTCTAAGCATAACGCATTGTATTCCATTATATTGTTTCAATTCTAGCCATATGTGTGAGCATGCACTTGACAGCAGAATTCCATCTCACGTTAAGAGGACTATGGAAACAACTCATAGTTCAATTGGGAATCAACAATTCAACGCAGAAAACTACATTGCAAGATTGTGTAGGCTTGATGAACTTAGTTCGAAATCAACAGTGACTCGTGTTAAACAAACTATTGAATCACAGCAAGACATGCACACATGGTTAAGTAGTGTACTTACTAACCATGCAATGTGTTTAGATGGATTACAGGGGCCAACTAGGACAGCTATGAAAACTGAACTTGACAAATTGATTTCTAGGCCAAGAACCTCTCTAGCCATGGTGAGAGGTATGGATAGAAATCTATTGGAGTCTACTACCACAAATATCCAGGGCAATGTTGTGGTGGCCAAAGATGGGAATGGAGACTTTAAGACTGTGGCATATGAACCCAACAACAGTGAGACAAGGTACATAATCCATGTGACAGAGGGGATCTACAATGAAAATGTCCAAATTGGTAGTGAGAAAACGAACATGATGCTCATGGATGATGGCATGAATGCAACCATAATCACTGGAAGCCTAAATAAAGTGGCCAGAGCAAGCATCTTGATGAGTCCAACTGTTGTATTTAGAAAAAAATTTACTTGGTTTATTAATTATATTATTGCATATTTTTCTAATGGTAATTTCACTTTGTGTAGATGGAGATGGAGATATGTTTATTGTCTAAAATATCCAATTTCAAAACGCACCAAGCCCACACAAGCAACAAGTTGTTGCTCTTCGACATTCTCGGAAACTCTTTGCTCGGACAAGAAGCAATTTTACCGTGTCTCCATAATCAATGGCGAAGCGCGATTCGTAACATTATCACAGCCTAGGGACGTGGTCCAAATAAAATCATGCGACTTCCATTCATACCAAGCACGAATCTTAGGCTTGTCATTGGACATGTCGTCTGTGAAAGAACTTTTCAAGAACTGTAGTACTAGATCATTTCTTGTTAGCCACATAGATCCAAGAGGATGGGATGACGAACATAAGAAGTTTTCGGAAACATTATACTTTGGAGAGTATATGAATAATGGCCCAGGTGCAGGTACCAGTGATACATTAAATTGGACTGGCTGTCTTCAATCTGACACACGCAAGGAAAACAAAGGTAAAGTTTCTTCAAAATGGCATCAGAGAGCCAAGAGCCGAAGGCACAAAACCGGGGAGGTGCACTCAGTAGCGGGCCAATTTAAATCATCTAGCCACGCAAATAAGTTGAATCGAAATTGTGGAGAAGTTTTGGGCTGGTTAGAAGAAAATCACTCGGACACATTGCTTTGGAACACCAACGATAATGGTAAACCACTCAATTTGTTATCTGTACCTTCTTATGTGCGAGGGGACACGCCCATCCAGAGTGGCAAATTTACCCATGAAGGTGGGGATTCCTTATCCACGCAGATGTTTGATAGTAAACGGTGGGAGTTGGTTGGAGTTGAAGAGGTAGCTGGGAAGGACGATGCTAACCTGCGGTTCGTTCGAGTTTGGAAGGAAGCTCGCCTCGCAGTGTGGATGGGAGTGAACTCTGTCGGGGCAACCACAAACTCAAAAGAGGTC 1652 0.414 MFLSITHCIPLYCFNSSHMCEHALDSRIPSHVKRTMETTHSSIGNQQFNAENYIARLCRLDELSSKSTVTRVKQTIESQQDMHTWLSSVLTNHAMCLDGLQGPTRTAMKTELDKLISRPRTSLAMVRGMDRNLLESTTTNIQGNVVVAKDGNGDFKTVAYEPNNSETRYIIHVTEGIYNENVQIGSEKTNMMLMDDGMNATIITGSLNKVARASILMSPTVVFRKKFTWFINYIIAYFSNGNFTLCRWRWRYVYCLKYPISKRTKPTQATSCCSSTFSETLCSDKKQFYRVSIINGEARFVTLSQPRDVVQIKSCDFHSYQARILGLSLDMSSVKELFKNCSTRSFLVSHIDPRGWDDEHKKFSETLYFGEYMNNGPGAGTSDTLNWTGCLQSDTRKENKGKVSSKWHQRAKSRRHKTGEVHSVAGQFKSSSHANKLNRNCGEVLGWLEENHSDTLLWNTNDNGKPLNLLSVPSYVRGDTPIQSGKFTHEGGDSLSTQMFDSKRWELVGVEEVAGKDDANLRFVRVWKEARLAVWMGVNSVGATTNSKEV 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00866 550 Gene3D - 342 411 IPR012334 -
Pste1g00866 550 MobiDBLite consensus disorder prediction 398 421 - -
Pste1g00866 550 SUPERFAMILY Pectin lyase-like 140 405 IPR011050 -
Pste1g00866 550 PANTHER PECTINESTERASE 341 391 - -
Pste1g00866 550 Gene3D Invertase/pectin methylesterase inhibitor family protein 15 131 IPR035513 -
Pste1g00866 550 Gene3D - 142 341 IPR012334 -
Pste1g00866 550 Pfam Pectinesterase 343 398 IPR000070 GO:0030599|GO:0042545
Pste1g00866 550 Pfam Pectinesterase 144 223 IPR000070 GO:0030599|GO:0042545
Pste1g00866 550 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 19 126 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00866 Pste-Chr1 2676682 2680519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00866 76 389 Carbohydrate Esterase AT1G11580 32.821 2.49e-44 164