Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00859 ATGGACTCCCTCATAGCCGCCGCCGACACCCCTCCTGGCACGCCAATGCCGATTTCCCTTCCCTCCGATCTCAACAGACTCATCTTCCCTCCATCCCTGCTCCCCATCCCCATCCAACCCACTACCCCGCCGCCGGCCCCGACCCAACCTGATCGGGCCGCCGAATCCCTAACCCGCCTCACTAAATCCGTGTCCCAGCACGGAAGCCCCAGTCAGCGAGTGGGCTTCTACTTCTGTCAGGCCCTCACCCGTAAAATATGGGCCGAAAAAGAAAAGGTAAAGGTCGAGGTGGAGGTGGAGTCCAGTAACAGTGACAGTAACAGTAACAGTAACAGTTGGGAGGAGTTGACGCTTTCTTACAAAGCCCTGAACGATGCCTGCCCTTACTCCAAGTTCGCCCACCTCACAGCGAACCAAGCCATCCTGGAAGCCACGGAAGGCGCCTCCAACATCCACATCGTGGACTTCGGCATCGTCCAGGGTATCCAATGGGCCGCACTCTTGCAAGCATTCGCCACCCGCTCCTCCGGAAAGCCCAATAAGATAAAAATATCCGGCATACCGGCCATTGGGCTTGGCCCGTCGTCTCTGTCGGCAACGGGCAACCGGCTCTCGGAGTTCGCGAAGCTCCTGGAGTTGAATTTCGAGTTCAGCCCTATTCTGACTCCCATTGAGCAGCTTAACCAGAACAGCTTTTGCATTGAGCCGGAGGAGAGCCTGGCTGTTAACTTCATGCTTCAGTTGTATAACCTCTTGGATGAGCCTCCGACCGCTGTTGACACCGCCCTCCGCTTGGCCAAGTCCCTAAACCCTATAATTGTGACTCTTGGTGAGTATGAAGCTTGCTTGACACGTGTATGCTTTATGAGCCGGTTCAAGACTGCCTTCAAGTACTTCTCTGCTGTCTTTGAGTCCCTTGAGCCTAACATGGCCCCCGACTCCCCCGAGAGGTTTCAGGTGGAGAGTCTCCTTCTGGGACGGCGAATTAGCGCCGTTATTGGGGCGAGGGAGAGTATGGAGGAGAAAGAGCAGTGGCGGGTTCTGATGGAGCGTGCTGGTTTTGAATCCGTCTCTCTCAGCCATTATGCCATTAGTCAGGCTAAGATACTTCTCTGGAATTACAGCTACAGTTCCCTCTTTTCTCTTCTTCCCACCCCTGCCTTTCTCTCTCTCGCTTGGAAAGATCTTCCTCTCTTGACTGTCTCCTCATGGCGCTACTTCTATTCAACACTTGACTGGGCAAACGGTACCGTGACCACCATGGTAGGGAGGGACAAACCTTTCTTTCCCATCGCTTCTAGTTCTACACATTGTGCCTCTGTAAATTGGATTTTGTTGTATGGATTTAAATTGCTCTCAATATCAAAGCGTTTTTTATCTTTACTTTCTAACTCTGGATTTTAA 1404 0.5278 MDSLIAAADTPPGTPMPISLPSDLNRLIFPPSLLPIPIQPTTPPPAPTQPDRAAESLTRLTKSVSQHGSPSQRVGFYFCQALTRKIWAEKEKVKVEVEVESSNSDSNSNSNSWEELTLSYKALNDACPYSKFAHLTANQAILEATEGASNIHIVDFGIVQGIQWAALLQAFATRSSGKPNKIKISGIPAIGLGPSSLSATGNRLSEFAKLLELNFEFSPILTPIEQLNQNSFCIEPEESLAVNFMLQLYNLLDEPPTAVDTALRLAKSLNPIIVTLGEYEACLTRVCFMSRFKTAFKYFSAVFESLEPNMAPDSPERFQVESLLLGRRISAVIGARESMEEKEQWRVLMERAGFESVSLSHYAISQAKILLWNYSYSSLFSLLPTPAFLSLAWKDLPLLTVSSWRYFYSTLDWANGTVTTMVGRDKPFFPIASSSTHCASVNWILLYGFKLLSISKRFLSLLSNSGF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00859 467 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 400 IPR005202 -
Pste1g00859 467 Pfam GRAS domain family 51 405 IPR005202 -
Pste1g00859 467 ProSiteProfiles GRAS family profile. 20 405 IPR005202 -
Pste1g00859 467 MobiDBLite consensus disorder prediction 36 50 - -
Pste1g00859 467 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00859 Pste-Chr1 2649415 2651149 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00859 48 405 GRAS Transcription Factor Family AT5G66770 62.228 2.24e-153 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste1g00859 GRAS 5.8e-97 CL0063