Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00852 TTTTATGAAAAATAGAGATGAGCGTTAAGTTTGAGTGATTCTTTCGACTTCCACATATTTATTAAACATATCCTTAATCAGCAGTTTTCTTATGTGGAAAACGTGCGTCCTACCAGCCAACCTGTTGTCGTTTCTTCGTTTCTTCGTTTCTTGCTGGTCAAACTCAATAGATTAATTAATCCCTTCTCTCGTTTACAGAAGATTTATTGTTTAGTTTACCGTTTCTTTCTTCACATTTATATTTTCCCCACTTTAGTGTTCTTCTTCTACCACTGCTCCCGCAACCTTCAAACTTTCTGACTCCAACGCAATGGCATCCGATCCCGAGCAACCCACTCATTCCTCTCTCGCAAAGGAAGGAGGGTCATCTAGTGAGATTGGGAGTGGAAGGGAGCCTCTGCTTACTGTGGCTCATGACTCTGAGAGTTATTCTGTTTCTGCTGCAATTCTCCCATTTCTCTTCCCAGCTTTGGGTGGTCTGCTATTTGGCTATGATATTGGTGCCACATCTTCTGCAACCATTTCTGTTAAGTCTCCAACACTAAGTGGAATATCATGGTACAAGTTATCTTCCGTTGAAATTGGTCTTCTTACTAGTGGATCATTGTATGGTGCCTTGATTGGCTCTGTGTTGGCGTTCAATGTTGCCGACTTCTTGGGTAGAAGAAGGGAGCTGATCGTAGCTGCATTACTATATCTTGTTGGAGCCCTTGTAACATCATTAGCTCCTAGTTTTCTTGTATTGGTGCTTGGGCGACTTCTATTTGGCATAGGAATTGGACTGTACATGTCCAAATGTCAAATTGTAAAGAATGCTGCCATGGATGTTCGGGTGTCTTCTCTAGAAGATGCTATGAAGGAATTATCGGATCAGGCTAAAGCAATGCATGCTGCTCCAATGTACATTGCAGAGACAGCTCCGACACCGATACGTGGACAACTAATATCTCTAAAAGAGTTCTTTATAGTACTTGGGATGGTTGCAGGATATGGCATCGGAGCCTTGTTTGTAGAAACAGTAGCTGGATGGCGGTATATGTTTGGAGTTAGTAGTCCTGTGGCAATAATCATGGGAATTGGTATGTGGTGGCTCCCAGCTTCTCCTAGATGGTTACTTTTACGTGCTATACAGGGAAAAGGGGATGTTCAGAATTCAAAAGAGATAGCAATTCATAGTTTATGCCAGCTTCGAGGTAAGGCTATCGGTGATGCAGCTACTCATCAACCTACAAATTATGACAGATCACAGGGCAACCAAGTGTTCTCTACTATGCTGCATCAATCCTTCAGAGTGCAGGATTCTCCGGAGCATCTGATGCAACCCGGGTCTCTATTCTCCTTGGGTTTTTTAAGCTTGAGGTTTTCTACAACATACAAGTTTGGATTAATGGATTGTCCATATGAAGTTATTGTTCAAGCTTTGAAATGTCATTTTATTTCTGATGTTCTTATAAGGTGCAATGAGTTAAGTGTTTATTTGATTATGACTGGAGTCGCTGTTGTCATTGTTGATAGACTTGGAAGGAGGCCTTTACTACTTGGGGGAGTTTCAGGGCTAGTGATCTCTTTATTCCTTCTGGGCTCATATTACATTTTCTTGGATAATGCACCAGCTGTTGCTGTAGTTGGTCTGCTGTTGTACGTAGGCAGTTATCAGATTTCCTTCGGCCCAATTGGTTGGTTAATGATAGCTGAGATTTTCCCCTTGCGCCTAAGGGGTCGAGGACTAAGTATAGCTGTACTTGTCAATTTTGGTGCAAATGCCCTGGTGACATTTGCCTTTTCCCCATTGAAGGCATTACTAGGAGCAGGAATTTTGTTTTACATATTTTGTGTAATAGCCGTGGCATCTCTTATATTCATATACCTTGTTATACCAGAAACCAAGGGACTTACACTGGAGGAGATCGAAGCCAAATGCCTCTAATCAGTTGCTATGTGACCTTTATAAACGTCTGTTTTCGGTACTCTACTGCTACTTGTGTTGAATCCAATGCATATGTGATAACACATTATATTGTAATTAAGAACTTAGGTTTATAATTTGTTTATCTTTTAATTTATTTTTACCGAGGCATGGATTGCACTCCATATCAAAGACAATTTCTAAAGTTTTTTTTCTTCTCAACTATAGTCATCACTCCATCTTTAACCTACATCTTTTTGAGTGAAATACTAGTTTGATCTTTGAAAGACTCAAACGGTGACACCGGAGTCCTTGAAAAATTTTTAGAAGCAACCAGATCTTTGAATGTTTTTGCCATTTATAAGTTAGTCCCTCCGTTACTAACAATGTTTAGTTAGTGCATAGTCAGCAATTAAGTGTCACACTAACAGGGTACCTCCC 2347 0.4043 MASDPEQPTHSSLAKEGGSSSEIGSGREPLLTVAHDSESYSVSAAILPFLFPALGGLLFGYDIGATSSATISVKSPTLSGISWYKLSSVEIGLLTSGSLYGALIGSVLAFNVADFLGRRRELIVAALLYLVGALVTSLAPSFLVLVLGRLLFGIGIGLYMSKCQIVKNAAMDVRVSSLEDAMKELSDQAKAMHAAPMYIAETAPTPIRGQLISLKEFFIVLGMVAGYGIGALFVETVAGWRYMFGVSSPVAIIMGIGMWWLPASPRWLLLRAIQGKGDVQNSKEIAIHSLCQLRGKAIGDAATHQPTNYDRSQGNQVFSTMLHQSFRVQDSPEHLMQPGSLFSLGFLSLRFSTTYKFGLMDCPYEVIVQALKCHFISDVLIRCNELSVYLIMTGVAVVIVDRLGRRPLLLGGVSGLVISLFLLGSYYIFLDNAPAVAVVGLLLYVGSYQISFGPIGWLMIAEIFPLRLRGRGLSIAVLVNFGANALVTFAFSPLKALLGAGILFYIFCVIAVASLIFIYLVIPETKGLTLEEIEAKCL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00852 538 ProSitePatterns Sugar transport proteins signature 1. 109 126 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pste1g00852 538 ProSiteProfiles Major facilitator superfamily (MFS) profile. 48 526 IPR020846 GO:0022857
Pste1g00852 538 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 388 537 - -
Pste1g00852 538 MobiDBLite consensus disorder prediction 1 19 - -
Pste1g00852 538 Gene3D MFS general substrate transporter like domains 39 299 IPR036259 -
Pste1g00852 538 ProSitePatterns Sugar transport proteins signature 1. 396 412 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pste1g00852 538 Pfam Sugar (and other) transporter 388 535 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste1g00852 538 Pfam Sugar (and other) transporter 194 271 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste1g00852 538 Pfam Sugar (and other) transporter 51 159 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste1g00852 538 SUPERFAMILY MFS general substrate transporter 192 534 IPR036259 -
Pste1g00852 538 PRINTS Sugar transporter signature 146 165 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g00852 538 PRINTS Sugar transporter signature 438 459 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g00852 538 PRINTS Sugar transporter signature 461 473 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g00852 538 PRINTS Sugar transporter signature 56 66 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g00852 538 Coils Coil 168 195 - -
Pste1g00852 538 MobiDBLite consensus disorder prediction 1 25 - -
Pste1g00852 538 SUPERFAMILY MFS general substrate transporter 46 161 IPR036259 -
Pste1g00852 538 Gene3D MFS general substrate transporter like domains 374 537 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00852 Pste-Chr1 2627978 2641797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00852 1 538 Organic Solute Cotransporters AT5G17010 60.073 0.0 592