Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00850 TGGTGAGAGGTTTGATAACAAAGGCAACTAAAGAAACCAACCAGTTGTACTGTATGGATTACTTCAATTTGAAGATGAGAGGTTTGACATGCGGTGCAGTAGAGATCTCACAGATGAAGGCTGCAGATAGTGCCATGTTAGCACAGCTTCCTAAATGTTCTGGGCAAAAAATAAGATGTCTAATTTTGTCTGGAACTTGTATGATAAAGTATGATCATCAAATCTTCTACCTTCTTGACAACCAAACATCTTCACTTCCTGTGCCAAATATGCAAACATTGTATATTGCTTTTGGTATAGCAGAAGTGTTAGAAAAGGAAATTCTACCAGATGTAACACACAAATTGCAGTTAAAAGGCTTTCAGAATTTTCCTTTCAAGGCTCTTAGGACTAATTTGCAACATCGCAACCTGGTAAAAATTTTGGCATGTTGCTTGAATGAAAATGAAAAGATACTTGTATACGAGTATTTGCAGAATAAAAGTCTCAACATTCACCTGTTTGATGACGAAAAAAGAAAACAATTAGATTGGAAACTGAGATTAAAGATTATAAATGGAATAGCAAGGGGTATTCTATACCTTCATGAGGACTCAAGAGTCACAATTATTCATAGAGAACTCAAAGATAACAATGTTCTGTTAAACCATGATATAAATTTTAAAATATCATGTTTTGGGTTGGCAAGGGCATTTGAAACAGGACAGAGTCAAGAAAAAACAAAACAGATTAATGGGCAAGTATGCTATGCAAGGATTATTTTTGCTGTTTTCAGTTTTGTAGTTCTCGTTCTAGAAATCATTTGTGGAAAAAAGAATAGTGGATTATACACGTTAGAGCATGATAAAACTCTTTTTATATGTGAGTCTTCACTGCTGTCTGGCTTGGAGAATATGATATGCAGGAAAATGTTTGGAATTGATGGATCCAATACTCGTAAAATCCTTCTTAAGCAGTGCATACATATTGGCTTGCAGTGTGTTCAAGAAGATGCAAAAGATAGACCAACCATGTCTGATGTTGTTGTAATGTTGGAAGTACCAACATCAAAAAGTTCAAAGAATCATTCCAATAATGATGTAACAGTCTCTATGTCATTACAAAGA 1106 0.3463 MDYFNLKMRGLTCGAVEISQMKAADSAMLAQLPKCSGQKIRCLILSGTCMIKYDHQIFYLLDNQTSSLPVPNMQTLYIAFGIAEVLEKEILPDVTHKLQLKGFQNFPFKALRTNLQHRNLVKILACCLNENEKILVYEYLQNKSLNIHLFDDEKRKQLDWKLRLKIINGIARGILYLHEDSRVTIIHRELKDNNVLLNHDINFKISCFGLARAFETGQSQEKTKQINGQVCYARIIFAVFSFVVLVLEIICGKKNSGLYTLEHDKTLFICESSLLSGLENMICRKMFGIDGSNTRKILLKQCIHIGLQCVQEDAKDRPTMSDVVVMLEVPTSKSSKNHSNNDVTVSMSLQR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00850 351 ProSiteProfiles Protein kinase domain profile. 62 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00850 351 FunFam Os07g0541700 protein 140 229 - -
Pste1g00850 351 Gene3D Phosphorylase Kinase; domain 1 93 139 - -
Pste1g00850 351 SUPERFAMILY Protein kinase-like (PK-like) 113 329 IPR011009 -
Pste1g00850 351 Pfam Protein tyrosine and serine/threonine kinase 113 326 IPR001245 GO:0004672|GO:0006468
Pste1g00850 351 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 112 332 - -
Pste1g00850 351 Gene3D Transferase(Phosphotransferase) domain 1 140 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00850 Pste-Chr1 2626988 2629707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00850 101 327 Receptor kinase-like Gene Family AT4G23190 47.541 4.46e-60 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00850 PK_Tyr_Ser-Thr 7e-22 CL0016