Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00842 ATGATTCATTCTCTAATGGTTCCCAAACCCATTCAAGTCTACCTTTTTTGCACTCTTACTTTGTTTTCAGGTGTTGTATTTGCCAAACCTCCATATAATATTTGCTCCACGAGCAGCAGTTATGTTGATGGCAGTTCCTTTGAAAACAATCTAATGAACCTCCTTTCCTCTTTATCCTCCAATGCTTCAATCTCCAAATTCTATAACACTTCTTATGGGGTTGCCCCAGATAGAGTTTATGGCCTCTATATGTGCCTTGGCTATACTACAACTGATTCTTGCCAGAAATGCATCATGGAAGCAACAAAGGACATTGTCAAACTCTGTCCTAAAGCTAAAGAAGCAGTTTTATGGGAAGAGATGTGTCAATTACGTTATTCCAACACCAATTTTTTGGGTAGGTTGAATGTCACAGGGAACATTGGCTTGAATAATAAACAGAATATCTCAGAACCAGAGAAATTTGAGTCTGCTGTGAATGACATATTAAGTTATCTTACTATGCTAGCATCTTTTGATGCTTCGACAAACAAGATCACTTGCCTGCAAAGTGCCATGAGAGATATACCAGGTTGCTGCTATACCTACATCGGGGCCAGAGTTCTGAGTCGTAGCTGTTATTTGAGGTATGAACTTTATCAGTTTCCACTTGGTGCAACAGAAACCAAAGATTCTTCAACCAGAAATAATGCACCTAAAAGAGGGAAAGAAATCGACAAAAATGGAATAGACAATCATCAAATCAATCTTCAGAACTTTGGTCAGCGAGGAGAGGCAGTATTTCATCAACAGAAATTTCGAGGAAGAAATAAAAAAACATTTGGTGACTTCCCTTGTATAGATCTTGCAACTCTTTGTGTGGCTACCAAAAACTTTTCTGATTTGAATAAGCTTGGACAAGGCGGTTTTGGCTCAGTTTACAAGGGGATACTTAATGATGGTCAAGAAGTAGCAATCAAAAGACTCTCAACTTGGTCTGATCAGGGCTCAGATGAATTCATAAACGAGATTCTTCTGATAATGAAACTTCAGCACAAAAATCTTGTAAAGCTTCTTGGATTTTGTGTAGATGGAGAAGAAAAGCTTCTAGTGTATGAATTTTTACCCAATGGTAGCCTTGATGTTGTACTCTTTGATCCGAAGCATTGTGCACGACTAGACTGGACCAAACGCATGGATATCATAAATGGAATAGCAGGGGGGATACTTTATCTTCATGAAGATTCTCGACTGAAAATAATTCATAGAGACTTAAAAGCAAGTAATGTATTGTTGGATTATGACATGAATCCAAAGATATCTGACTTTGGAATGGCCAGGATAGTTGCAGGAAGTGAAGGTGAAGCTAACACTGCTACGATAGTTGGCACATATGGATACATGTCTCCTGAATATGCAATGGAAGGATTGTATTCCATAAAGTCTGATGTTTTCGGATTTGGAGTACTGTTGCTTGAGACCATTACAGGAAAACGTAACACGAGTTTCAATCAGTCTCAAAACTCTCCTAGCCTTCTATCATATGCATGGCATCTTTGGAACGAGGGAAAGGGGCTGGAATTAAAGGATCCGTTGTTAGCTGATTCATGTCCTGGAGATCAGTTTTTGAGATATATGAATATTGGATTGTTATGTGTTCAAGAAGATGCATATGATAGGCCAACCATGTCTTCTGTTGTTTTGATGTTAAAGAATGAGTCAGCCAAGCCTGGCCAACCAGAACGACCACCTTTCTCTCTTGGCAGATCCAATGCTAATGAGCCAGATTTCCAAGAATGCTCACTCAATCTCTTAACCATTTCACATATATTGCCCCAATAA 1821 0.3888 MIHSLMVPKPIQVYLFCTLTLFSGVVFAKPPYNICSTSSSYVDGSSFENNLMNLLSSLSSNASISKFYNTSYGVAPDRVYGLYMCLGYTTTDSCQKCIMEATKDIVKLCPKAKEAVLWEEMCQLRYSNTNFLGRLNVTGNIGLNNKQNISEPEKFESAVNDILSYLTMLASFDASTNKITCLQSAMRDIPGCCYTYIGARVLSRSCYLRYELYQFPLGATETKDSSTRNNAPKRGKEIDKNGIDNHQINLQNFGQRGEAVFHQQKFRGRNKKTFGDFPCIDLATLCVATKNFSDLNKLGQGGFGSVYKGILNDGQEVAIKRLSTWSDQGSDEFINEILLIMKLQHKNLVKLLGFCVDGEEKLLVYEFLPNGSLDVVLFDPKHCARLDWTKRMDIINGIAGGILYLHEDSRLKIIHRDLKASNVLLDYDMNPKISDFGMARIVAGSEGEANTATIVGTYGYMSPEYAMEGLYSIKSDVFGFGVLLLETITGKRNTSFNQSQNSPSLLSYAWHLWNEGKGLELKDPLLADSCPGDQFLRYMNIGLLCVQEDAYDRPTMSSVVLMLKNESAKPGQPERPPFSLGRSNANEPDFQECSLNLLTISHILPQ 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00842 606 Gene3D Phosphorylase Kinase; domain 1 258 367 - -
Pste1g00842 606 CDD STKc_IRAK 298 565 - -
Pste1g00842 606 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Pste1g00842 606 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 29 131 - -
Pste1g00842 606 SUPERFAMILY Protein kinase-like (PK-like) 277 587 IPR011009 -
Pste1g00842 606 Gene3D - 175 215 IPR038408 -
Pste1g00842 606 Gene3D - 29 131 IPR038408 -
Pste1g00842 606 ProSiteProfiles Gnk2-homologous domain profile. 29 131 IPR002902 -
Pste1g00842 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Pste1g00842 606 FunFam Cysteine-rich receptor-like protein kinase 10 262 367 - -
Pste1g00842 606 Pfam Salt stress response/antifungal 35 128 IPR002902 -
Pste1g00842 606 Gene3D Transferase(Phosphotransferase) domain 1 368 574 - -
Pste1g00842 606 Pfam Protein tyrosine and serine/threonine kinase 296 560 IPR001245 GO:0004672|GO:0006468
Pste1g00842 606 SMART serkin_6 292 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00842 606 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 368 570 - -
Pste1g00842 606 ProSiteProfiles Protein kinase domain profile. 292 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00842 606 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 34 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00842 Pste-Chr1 2601554 2604737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00842 13 580 Receptor kinase-like Gene Family AT4G05200 40.735 1.20e-145 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00842 PK_Tyr_Ser-Thr 1e-44 CL0016