Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00836 AAATGTAATGAAGCAAGCAGCATTGCATAAAAAAAAAATGACTGCAATAAAATCGCAGGCGAAACGTCACAGTCACACCCTTCCCTCACACAGAAAAAGTGTCACCCAGCAAGCCACAGCTTAGGGTTAGTCTGTTATTGGTTTTCTTCTTGTTCTACTTCTCCTCCTTCTTCTGGTTCTACCCAAACAAGCCCTTAGAAACAAATTCACATTCCGAAAACACCCTTGTTGTTGTTACGCATGGCGAAAACGAGACCAGGCAGAAAGGACTTGGACTCGTACACCATAAGAGGGACCAACAAGATCGTCCGAGCTGGAGACTGTGTTCTGATGCGGCCATCGGACACGTCGAAGCCCCCTTACGTGGCACGTGTGGAGAAGATCGAGCAGGACAACAGGAACAACGTGAAGGTGCGTGTGAGGTGGTACTACAGACCAGAAGAGTCGATTGGGGGTCGCAGGCAGTTCCATGGGGCAAAGGAACTGTTTCTCTCTGACCACTACGATGTGCAGAGTGCTCACACCATCGAAGGCAAGTGTGTGGTCCACTCTTTCAAGAACTACACTAAGCTTGAGAATGTGGGTGCTGAGGATTACTATTGTAGATTCGAGTACAAGGCTGCAACTGGAGCTTTCACCCCTGACCGCGTCGCTGTGTATTGTAAGTGTGAGATGCCTTATAACCCCGATGACCTAATGGTACAATGTGAAGGGTGTAAGGATTGTGTGTTAAATCTAATGAGTATTCAAGAATCGTCCTCTTGTGGATTTCCATATCTGTTAATGTTCGTATCATCCTGCTTGTGTGGAATGACTATTGAAGAAGCAAAGAAACTAGACCATTTTGTGTGTTCGAATGTTCATCCGATGATGATATCAAGAAACCCCAAGCTACATTTTCTGCATCACCGGGAGCTGATGGCAAGCCTTGCCATCGTCTCTTCTGCTTCAAATCCTGAAAATCCCTTGACATTTGTGGCTCCCTGTTGTCGAACAATGGCAGCAATGGAAGGTGCGCGGTGGAGTTGGTTTAGGGGTGGGGGAGGAGTAGTGGCAATGGTTCTTGGTGTTTGGTTTGTGGTGGTTGTTGATCAAACTGTAGATATCAGTGTATCACTAGGAGGTTGGACAAGAATGATTGAATGTAGAGCCAAAGAGGCGAAAGAGATGACCATAAAATGCAGTAGTAACATTGAGAAGCGTGCGTCACTCTTGCTATGCTACCTTTTGTGTGTGTTGTACAGCTTCTTCTAGAGGCTATAAAAATATTTAATGTATTTGACTCAGCTTATTATGTATGTATTCTTGTTAGATTTTATCATCCTTTGTCCATTAAGAGTAAGAGAAACTCCGATCCAAGTGTTCATTCCTGAGATGATAACATCAAACCTTGAAAACTAAGTATAGAGAGCAATTGTTATTTTCAAATGTTGTTTTGGTAAAGTTGTTACAAATAAGTGTTAATAAGATATTATATCACACATTCATCTTAATAGTAAAAAAACTCTTCTTGATACACTATTATCGGTTAAATTTTATTAAAAAATAAGTGTTAATAAAATA 1563 0.421 MAKTRPGRKDLDSYTIRGTNKIVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCVVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDCVLNLMSIQESSSCGFPYLLMFVSSCLCGMTIEEAKKLDHFVCSNVHPMMISRNPKLHFLHHRELMASLAIVSSASNPENPLTFVAPCCRTMAAMEGARWSWFRGGGGVVAMVLGVWFVVVVDQTVDISVSLGGWTRMIECRAKEAKEMTIKCSSNIEKRASLLLCYLLCVLYSFF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00836 337 SUPERFAMILY FYVE/PHD zinc finger 132 162 IPR011011 -
Pste1g00836 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 210 IPR013083 -
Pste1g00836 337 ProSiteProfiles BAH domain profile. 21 136 IPR001025 GO:0003682
Pste1g00836 337 SMART BAH_4 21 136 IPR001025 GO:0003682
Pste1g00836 337 PANTHER OS08G0421900 PROTEIN 1 211 - -
Pste1g00836 337 Pfam BAH domain 23 135 IPR001025 GO:0003682
Pste1g00836 337 CDD BAH_BAHCC1 22 156 - -
Pste1g00836 337 FunFam Chromatin remodeling protein EBS 1 132 - -
Pste1g00836 337 Gene3D - 2 135 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00836 Pste-Chr1 2583640 2590385 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00836 41 138 Core DNA Replication Machinery Family AT4G14700 31.313 3.98e-09 56.2