Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00820 CCTTCTCTCTCTTTCTCTTTCTCTTTGCCTCTCCTCTCCTCTCCTCTCAATCTCAAATCTCTAATCTCTGCTCTGCAAACTACTCCAAATTGATTGAATGCTCCAAACTCCATCCACACACCTTCAAAAATCTTATTAATTACCCTCACCTAGCAACCTCCTCTCCACAAAAACTCTCTTCAATCCTTCAAAAATTTTCATTCTATATATACATATTATTGCACAACACTGAGCAAGGGGGGGTAAGGAAATTAATCTACACAACTAAGCAAACAAGGAACCAAAGCAGCAACACGTAAAGGCTTGTTTGGATGGAGCTATTCCCAGCACAACCAGACTTGTCCTTACAAATCAGCCCTCCAAACTCCAAACCCACATCAAGTTGGAGGAGAAGCACAGAAGAAGACATGGATTTGGGGTTTTGGAAGAGAGCCTTGGACTCAAGAAACTCACTCTCATCAATGGCCAAACAAGACTCTCGCTTCGACCTCTCCCTCTCCAATCCAAAAGCCTCGGAAAACTCCAATCCCTCCAACCTCATTCACCACTTCCAAAACGCTGCCACCAACAACCCCTTCCAACCCTTTCAGCAAAACCACTACTTCCACCAGCCACTGTTCCAGCCTCAGCACCAAAGCCTAAGCCAAGACCTTGGCTTTCTAAGACCCATTAGAGGAATCCCAGTGTACCAAAACCCTCCTCCTATACCATTCACCCAACACCACCATCATCATCATCTCCCTCTAGAAGCTTCCACCACCACCCCTTCTATCATTTCCAACACAAACACTTCCTCCACCCCTTTCCACTCTCAGGCCCTTATGAGATCAAGGTTCTTGTCACGCTTCCCTGCTAAGCGTAGCATGAGAGCTCCCAGGATGCGTTGGACTTCTACCCTCCACGCTCGTTTTGTTCATGCCGTTGAACTCTTAGGTGGCCACGAAAGGGCTACACCCAAATCAGTCCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCTCATGTTAAGTCTCATTTACAGATGTACCGGACCGTGAAAACTACAGATAGGGCGGCGGCTTCTTCAGGGCAATCGGATGTGTATGATAATGGATCCTCTGGAGATACTTCTGATGACTTAATGTTTGACATAAAATCTTCAAGAAGGTCTGATCTATCCATTAAGCAGGGAAGATCAAGTGTTAATCAAGATAAGGAATATCATGGTCTTTGGGGCAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGACAAAGGCTGATTCTGTTGGAAACGTGCCTTCTCTTGAGAAGGAAATGGATCCAAAGTGCCAAAGCTATGAGAGAATATCAGATGGAAGTTCATCCTCAAACCTTTCAGGATCAAGCCCGAAGAAGCCTAATTTGGATTTGGAGTTCAGCTTGGGCCAGCCACTTTAAATTGAAATCTGGATCCTCTCTGAAAGTATATATTATTCATTAACTATTATGAAACTGAAAGAGGTAGAGCGCAGGAATGAGAATCAGGAACCCGCTGAGAAAATCAGAGAAAGAGAAAGGTAAAAGAAAACAAAGGAGAAAAAGAAAAGTAAAAGGAGCTAAAGAACACAAGGAGACAAGAAAGACAGAAAGCAACAAAAGGAAGGGAGTGAGGGAAAAAAGCATGGCCTTCCTATCAGAGCTCCTGTGTGAGATCCAAATCAACATATTATATTTTCTTGGTAAATATATGAAATCTAATTGATTTGTATGTTTTTGCAATCTGAGAGAAAGAAAGGGACATGAGAGAGAGAAAGAGAGAGAGAGCTGTGTTAAAAGTATGAAGTGATCCTTGGTAATTGTAATGGAGCACTTTACATTTATGAAATATTTAGATATTTCCACCAAAGAA 1869 0.4291 MELFPAQPDLSLQISPPNSKPTSSWRRSTEEDMDLGFWKRALDSRNSLSSMAKQDSRFDLSLSNPKASENSNPSNLIHHFQNAATNNPFQPFQQNHYFHQPLFQPQHQSLSQDLGFLRPIRGIPVYQNPPPIPFTQHHHHHHLPLEASTTTPSIISNTNTSSTPFHSQALMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDTSDDLMFDIKSSRRSDLSIKQGRSSVNQDKEYHGLWGNSSREAWLHGKTKADSVGNVPSLEKEMDPKCQSYERISDGSSSSNLSGSSPKKPNLDLEFSLGQPL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00820 368 MobiDBLite consensus disorder prediction 337 356 - -
Pste1g00820 368 MobiDBLite consensus disorder prediction 1 31 - -
Pste1g00820 368 SUPERFAMILY Homeodomain-like 185 241 IPR009057 -
Pste1g00820 368 MobiDBLite consensus disorder prediction 315 368 - -
Pste1g00820 368 MobiDBLite consensus disorder prediction 246 271 - -
Pste1g00820 368 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 367 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pste1g00820 368 FunFam Myb family transcription factor 186 244 - -
Pste1g00820 368 MobiDBLite consensus disorder prediction 246 270 - -
Pste1g00820 368 NCBIfam myb-like DNA-binding domain, SHAQKYF class 188 241 IPR006447 GO:0003677
Pste1g00820 368 Gene3D - 187 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00820 Pste-Chr1 2544274 2549424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00820 1 367 G2-like Transcription Factor Family AT4G17695 39.119 2.94e-62 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste1g00820 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00820 1 2544274 2549424 Pste1g00820 1 2544274 2549424 ECH