Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00803 TCATTTCAAATAAACTCACAACACAACATGGCAGAAGCAGCAGCAGCAGCAGCAGCTACTTCAGTTGAAACCCAACAAGGCACACAATTAATGTGTGGACCTAAAACTAGTACACCTGATGGGTTAGAGTTAAACAACATTTCATCATCAACCCACATTTTCAGATCAAAATTACCAGACATACCCCTCCCCAACAACATGCCCCTCCACAAATACTGCTTTCTTAAACTCCCCGAAAACGCGGACAGGCCATGTCTCATCGCCGGCGAGAGAAGCTACACCTACGGAGAGACACACCTGGCCACGCGAAAGGTGGCGGCGAGCATGTCCAAGATGGGCATCCAGAAGGGCGACGCCATCATGATCCTCCTCCCCAACTCCCCGGAGTTCGTGTTCTACTTCATGGCGGCCTCCATGCTCGGAGCCATAGCCACCACCGCCAACCCCTTCTACACGGCTGCTGAAATATCGAAGCAGCTGGCGGCGTCCAAGGCCAAGCTGGTGGTGACGCGGTCGGCCTACGTCCACAAGGTCGGGGAGAAGTGCTTGAAGGTGGTGACGGTGGACGAGCCACAGGACGAGACCGAGAGCGAGAGCGAGAGCGAGGTGCCGGAGGTGGATATATGGCCGGAAGATCCGGTGGCGCTGCCGTTCTCGTCGGGAACGACGGGGCTGGCGAAAGGGGTGGTTCTGACGCACAAGAGTATGGTGACGAGCGTGGCGCAGCAGATGGAGGGAGAAAACCCGAATCTGTACCTGAAAGAAGAGGACGTGGTGCTGTGCGTGCTTCCGCTGTTTCACATATTCTCGATGCACAGTGTGATGATGTGTTCGCTGAGAGCGGGGAGTGGCATTTTGTTGATGGAAAAGTTTGAGATAAAGGGGCTTCTGGAGGGCATAGAGAGGCACAGGGTGTCTGTGGCGATGGTGGTGCCGCCTCTAGTGGAGGCGCTGGCGAACAATCCCGCCGTTGAGGAGTATGATCTGAGCTCCATTCGGTTGATCATGTCGGGGGCAGCGCCGCTGGGTGAGCAGCTGGAAGAAGTTATGCGGAAGAGGTTGCCAAAGGCGATCCTGGGACAGGGGTACGGGATGACAGAGGGAGGGCCAGTGATAGGGATGTGTTTGGGGTTTGCCAAGTATCCATACAGGACAAAGAGAGGATCGTGCGGAAGTGTGGTGAGAAATGCAGAGATGAAGGTGATTGATACAGAAAGTGGTAATAGTGTTGGGAGGAAGGAGGCAGGGGAGATATGCATCCGTGGGCCACAGATAATGAAAGGTTACCTGAATGACGAGAAGGCAACTAAAGGGGCCATAGACACAGAAGGTTGGCTTCACACGGGTGACATTGGCTACGTCGACGAGGATGATGAGATATTCCTCATTGACAGACTCAAAGAACTCATCAAATATAAAGGCTTCCAGGTTCCCCCAGCCGAGCTTGAACACCTTCTTATCACCCACCCTTCCATTTCAGATGCAGCTGTTGTCCCCCAAAATCACCACTCTGCCGGTCAACTTCCGGTTGCTTTCGTCGTCGCCTCTCAATCTCATCTTACAGAACAAGCTGTCAAGGATTTTATAGCCAAACAGGTAGTGTTTTACAAAAGACTTCACAAAGTGTATTTTGTTAATGCAATTCCAAAGTCTCCGACGGGAAAGATATTAAGAAAAGAACTGAGAGCAAAGCTGGCGAGCAATGATATTGAGAGGAGCTAATAGCTACAACTCTTTTGGCAATCTCTTTCTTATTTTCTTCTTCAATTCCTTTCCTATTAGGTCTACTGTGTAACCTATGAAACATGCTGCATAATACTCACTAGTCAATAAGGAGCATTACGACTCATTTTATTGGAGTTGCCAA 1867 0.5104 SFQINSQHNMAEAAAAAAATSVETQQGTQLMCGPKTSTPDGLELNNISSSTHIFRSKLPDIPLPNNMPLHKYCFLKLPENADRPCLIAGERSYTYGETHLATRKVAASMSKMGIQKGDAIMILLPNSPEFVFYFMAASMLGAIATTANPFYTAAEISKQLAASKAKLVVTRSAYVHKVGEKCLKVVTVDEPQDETESESESEVPEVDIWPEDPVALPFSSGTTGLAKGVVLTHKSMVTSVAQQMEGENPNLYLKEEDVVLCVLPLFHIFSMHSVMMCSLRAGSGILLMEKFEIKGLLEGIERHRVSVAMVVPPLVEALANNPAVEEYDLSSIRLIMSGAAPLGEQLEEVMRKRLPKAILGQGYGMTEGGPVIGMCLGFAKYPYRTKRGSCGSVVRNAEMKVIDTESGNSVGRKEAGEICIRGPQIMKGYLNDEKATKGAIDTEGWLHTGDIGYVDEDDEIFLIDRLKELIKYKGFQVPPAELEHLLITHPSISDAAVVPQNHHSAGQLPVAFVVASQSHLTEQAVKDFIAKQVVFYKRLHKVYFVNAIPKSPTGKILRKELRAKLASNDIERS 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00803 573 Gene3D - 45 466 IPR042099 -
Pste1g00803 573 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 48 563 - -
Pste1g00803 573 CDD 4CL 63 561 - -
Pste1g00803 573 Pfam AMP-binding enzyme 80 472 IPR000873 -
Pste1g00803 573 SUPERFAMILY Acetyl-CoA synthetase-like 46 567 - -
Pste1g00803 573 Gene3D - 467 569 IPR045851 -
Pste1g00803 573 FunFam Long-chain-fatty-acid--CoA ligase FadD 55 467 - -
Pste1g00803 573 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Pste1g00803 573 FunFam 4-coumarate--CoA ligase 2 468 568 - -
Pste1g00803 573 Pfam AMP-binding enzyme C-terminal domain 481 555 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00803 Pste-Chr1 2493053 2496509 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00803 53 479 Monolignol Biosynthesis Gene Families AT1G65060 63.492 0.0 581
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00803 1 2493053 2496509 Pste1g00803 1 2493053 2496509 ECH