Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00799 GAAACAGTGGTTGATGAAGGCGATTGCAGTGGCGGAATCCGATTCAAGCAGCATATGATATGAGTGCAATCCTTCACCCATTCACCGCCATTAAAATTTGCAGCTCCCAACGCTGAAGAGAATCGACCACTCAACGACATTTACCACTTGACTTCTACAAAATCATTCCCCTCTTTCTCACTTTCAATTTTAATTAAGAACGGCGTGCTCAATTCCCAACCAACCGTAACCCTTCCTCCGTTCTGCTCAATTCAATCGCGTTCGCGCTGAAGGGACCAAACCTAATTTGCGAGCCAAGAGGAAAATTGCGGAGTGAAATAGGGATAGTGAAGTTTCAATAGGGTTTTCGAGGCTCCAGAACAGGACATTTTGCTCCTCTCCTCTGCTTCGATGAGTTCCTGCTGATTTGACAAATTGAGATAGCCCTGTTCACACAGCATGGGTTACGATTCGGAGAGCCCCTCTCCGAATGGGAGGGACGAAGATGACGAAGAAGAATATGAGGATTCTGGCAAGGGTAATCGATTTCTCGGGTTCATGTTTGGGAATGTAGATAATTCTGGTGATCTCGATGTTGATTATCTTGATGAGGATGCAAAGGAACATCTTTCTGCTTTAGCTGATAAGCTGGGTCCATCACTGACAGATATAGATTTGTCAGGAAAATCACCACAAACACCAGCCGACGTTGTTGAACAAGACTGTGATGAAAAAGCTGAAGATGCTGTTGATTATGAAGATATTGATGAAGAGTATGACGGTCCAGAGACAGAAGCTGCCAATGAAGAGGACTATTTATTGCCAAAAAAAGAATTTTTCTCTGCTGAAGCCTCTATATGTTTGGAATCCAAAGCTTCTGTCTTTGATGATGAAAATTATGATGAAGAGTCTGAAAAGGAGCAAGACTTTGTGAATGAAGATTCTAAAGTTGATAACATCTCTTCAGTTGGAAAGCCGGAAGAGAATTTTGTAGATGCATCTAAAGAAGAGAGTACTCTTGAACATGAATTACATGGTGATTCACTGCAGGCGGAAGAATTGGACGCTGAAGGACAAAAAGTTGAGGAGGAAGTGCCTGAAGTTCAGAAAAGGTCTATGTCTATGCCATTGCCTGTTTTATGTGTGGAAGATGGTATGGTAATTTTACGCTTCTCTGAAATCTTTGGCATTCATGAACCTCTCAGAAAGGGAGAAAAGAGAGAGCATCGGCATTCTATTCCTAGAGATAGATACAAGTCTTTGGATTTAACCGATGATTTTGTAGAAGAGGATGAGGAGGAATTCCTCAAGAGCTTCTCTCAGAGTCTCTCACTTACTAAACAGGTTTTTGTAGATCATAGTGATGCATCAGAAAGCAATGATGTTGACTTGGAGTTTCCAAAATTTGGATTTCTTCATGCGGATTCCACAGTGGCCAGGAAAGATAATCAACAATCGAAAGACTCATGTCATAGTGCTGAACCAATGAAAGGGGATTTTGCGGAAGATCTTTCCAGGGAAGATCATCCTTTCATGTGGACCAACTTTTATCCTCTTGATCAGCAAGACTGGGAAGATGAGATCCTTTGGGGCAATTCTCCTGTTCCAAGTAATAATAATGTTGAAAGCTGTGAAATTTCTGGACCTGAGTTAGGAGCTTCTGGTGGCAGTGAAATAGAAATTGAAAGTGGGGTCCACAATATTGAGATGGAGCGTCAGAAGATACTGGAGGATAAAGATCATAATGCCTTTATTTGTAGCTCTCCTGTCTCATTGGAGCCCTTTGGCTCAAGGGATTCTTCTGGAGCTAAGACCAATTTAACATCTAGAAGTCTATTTCACCCCCAACTTTTAAGGCTAGAATCCAGATCTGAAATGGATAATTCTAGTCTTGCAGATGGAAGAGAAGCAGAGATATCTGAGCATAATCAAAGTGGTCAGGTAAAGCGTTTTACTAAGGTTATATCACAAAACAGAGACATGATGGAGGGTTCTTGGTTAGACAAGATAATATGGGAGGAGCTTGATCAGCCTATGGTGAAACCAAAGCTTATCTTTGATCTTCAGGATGATCAAATGCACTTTGAAGTTCTCGATAGTGAAGATAGTACACATCTTCGCCTTCATGCTGGGGCTATGATTTTAACTCGTTCTTTAAAATCAAGTAGTGGGGACCCTTCTGAGCTACCAGGAAATGGAAGTCAATATGGATGGAGATATGTTGCTAATGACAAACATTATTCAAACCGTAAAACTTCTCAGCAACTGAAATCAAATTCCAAAAAACGCTCAGCTCATGGTGTAAAAATTTTTCACTCACAACCTGCGTTGAAGCTGCAGACAATGAAATTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGGCCAAAAGCGTTATGGTATCCCCATGACAATGAGGTGGCTGTCAAAGAACAAGGAAAATTGCCAACTGAAGGACCTATGAAAATTATTATAAGGAGTTTGGGTGGCAAGGGGAGTAAACTGCACGTTGATGCTGAAGAAACTCTCTCTTCTTTTAAAGCAAAAGCTTCCAAAAAGCTAGGTTATTTTAAGCCATCAGAAACAGTGAAAATATTTTATTTAGGGAGGGAGCTTGAAGATCACAAGTCACTTGCTGCACAAAATGTTCAACCAAACACCTTGATACATCTTGTTCGTACAAAGATACATTTGTGGCCCAAAGCACAAAAGGTTCCTGATGAGAACAAGTCCTTGCGTCCTCCTGGGGCATTCAAGAAAAAGTCTGATCTCTCTGTAAAAGATGGACATGTTTTTCTAATGGAGTATTGTGAAGAAAGGCCATTACTTTTGAGCAATGTTGGAATGGGTGCAAGACTATGTACATACTATCAAAAATGCTCACCAGATGACCATTCGGGCTCCTTGTTACGCAACACAGATGGTAGCTTGGGGCACATTATTTCTCTGGATCCTGCTGATAAATCTCCTTTCCTTGGAGATTTAAAACCTGGTTGCAGTCAATCATCACTTGAGACAAATATGTATAGAGCACCTGTATTTCCTCACAAAGTTCCATTAACTGACTACCTGCTGGTTCGTTCATCAAAGGGAAAGCTATCATTAAGGCGCATTGATAAAATCAATGTTGTCGGACAGCAGGAGCCTCTCATGGAGGTATTTTCACCTGGAAGTAAAAATCTTCAGACTTACATGATGAACAGGCTATTGGTACACATGTGCCGGGAATTCCAAGCAGCAGAGAAGCGGCACTTGCCTCCTTATATCCGTGTTGATGAATTTCTCTCACAGTTTCCTTACCAATCAGAAGCATCATTCCGTAAGAAAATCAAGGAATATGCCAATTTACAGAGGGGAACAAATGGACAGTCCATTTTGGTAAAAAAGAGAAATTTTCGCATGTGGTCAGAGGATGAATTGAGGAAAATGGTTACACCAGAGCTTGTTTGTGCCTATGAAAGCATGCAAGCTGGCCTCTACCGTCTAAAACATTTAGGAATTACTGAAACACACCCTACTAATATTTCATCTGCAATGAGTCGGCTTCCTGACGAAGCAATAGCATTGGCTTCCGCATCACACATCGAGAGGGAACTGCAGATTACTCCTTGGAACTTGAGTAGCAATTTTGTTGCTTGTACAAGCCAGGGTAAGGAAAATATTGAACGAATGGAAATTACTGGTGTCGGTGATCCATCTGGTCGTGGCATGGGCTTTAGCTATGCTCGCGCACCTCCAAAGGCACCTGTGTCCAGTGCAATGGTGAAGAAGAAAGCAACTGCCAACCGCGGAGGTACTACTGTTACTGGTACAGATGCTGATCTACGTAGGTTAAGCATGGAGGCTGCACGAGAGGTTCTTCTTAAGTTCAATGTTCCTGAGGAAGTCATTGCAAAACAAACTAGGTGGCATCGCATTGCAATGATACGTAAACTTTCAAGTGAACAAGCTGCATCTGGGGTTAAGGTTGATCCGACAACTATCAGCAAATATGCTCGTGGCCAGCGAATGTCTTTTCTTCAGTTACAGCAGCAGACCAGAGAGAAATGCCAAGAGATTTGGGATCGACAAATACAGAGTCTGTCAGCTGTAAATGGTGATGAAAATGAGAGTGATTCGGAAGGGAACAGTGATCTGGATTCTTTTGCTGGAGATCTGGAAAATCTACTTGATGCCGAGGAGTGTGAAGAGGGAGAAGAGGGTACCAACGTCTTAAAACGTGATAGGGGAGATGGTGTTAAGGGTCTTAAAATGAGAAGACACCCTACTGTAGCTCAGGCAGAGGAGGAAATAGAAGATGAAGCAGCTGAAGCTGCGGAATTGTGCAGGTTGCTTATGGATGATGATGAAGCTGACAGGAAGAAAAAGAAGAAAGCTAAAGTCATGGTGGGAGAAGCAAGGTTGTTACCAAAGATGCAATCAAAATTTGCCTTTGACAATGCCGAACAAGAGGAAAGCTTTCCTGCTAAGAAAAGCAAATCACTAAAGGCCAATAAAGTCAAGAAGAATGATACTACACCTATCAGTTTACCCAATAAAAAAATCAAATTGAATATGGGAGAAGGAATTAAGGTTGGGCACATGCGAACAAACAAGAACTGTCCAAAATATGGTGAAGATCTTGAAACTCAACTTGAATCTACAGATATGGAAAAAACATCTGGAAAATCCAGCTTGGTGGATCCCTCTAGTCATTTGCAGCATAAAGCTCCCTCCAAAAAGTCAATATCAAAAAGTGCAACAAAAGTTGCTCCAGTTGACAATTCAACAAAAATTCCACTGAAATTCAAATGTGGCTCCACAGAGAAATCTTCTGATAAACCTGCAATAGAAACCCTGCAGAGTTCTGACAAGCCAGTCACTTCTGATTCAGAAACTGCGAAGTCTGCTAAGGTTAATAAGATAATTTTTCCAAAGAAAGTGAAACCAGATGATACGCAGGCTGAATCTCGTAAGCATGCCATTGTTATACGGCCTCCTACTGATTCAGGTAGAGGTCGGGTTGATTCTCCTAAGTTCCCAATTAAAATACGCCCGCCAACAGAAATAGATAGGGACCAAAGTCACAAAAAGATTGTAATAAAACGTACAAAGGAGGTTATAGATCTGGAACTTGACAGTCCTGCTGGAAACACAGGACTTCAACACAGAAAAACCAAAAGAATTGTTGAATTGTCGAATTTTGAGAAACATAAAAAACAGGAGACCGTGTATGGAGCTGAAGGTTTTGTAAAATGGAACACTAAAGAGGACAGAAGATGGTGGGATGAACAAGAGAAACGGAGAAATGATTCGCGGCTTCGAGAAGAAGACAGAGCAAGGCATCACAAAGAAATCAGGATGCTCAAAGAACAAGAAAGGTTAGACGAGATAAAAAGATTTGAAGAAGATATTAGAATAGATAGGGAGGAAGAAGAACGACAAAAAGCTAAGAAGAAAAAGAAGAAGAAAAAGCCTGAATTAAGAGATGAATATTTAGATGATCCCAGAGCAAGAAGACATGATAAGCGAATGCCAGAAAGAGACCGGAGTGGAAAAAGGAGATCAGTTACCGAGTTAGGAAAGATTGGTGCAGATTATATGCCACCAACAAAACGCCGAAGAGGGGGAGGGGGAGAGGTTGGCTTGGCAAATATCTTGGAGGGCATTGTGGACACCATTGTGAAAGATAGGTATGATCTGTCTTACCTTTTCTTGAAACCGGTGTCGAAGAAGGAGGCTCCTGACTACCTGGACATTATAGAGAGGCCTATGGATCTTTCCAGAATCAGGGAAAGGGTGCGGAATATGGAGTACAAGAGCCGAGAAGATTTCAGGCACGATGTTTGGCAGATTACTTACAATGCACATAAATATAACGATGGGCGAAATCCAGGAATTCCTCCGCTTGCAGATATGCTTTTGGAATATTGTGATTGTTTGTTGAATGAGAATGATGACAGCCTCACTGAAGCAGAAGCTGGCATTGAAACTAAAGATTTCTAAACCATCTCAAATTCAGATCATTATGTAGAGGTTAATTGTACTGTAAATTCTGGTTTAAAAAGATACCAAAAATGCCTCTTGTAATTTTTTAACGATATTCAAAGAGGGTTACAAGTTGTATATGGAAACAAGGTTGATTTATACCTAGAAATCAAACAAGTGTTAGCAGATTTATAAAAAATGATGTATCAACCGTAGTCCCTATAGCTCATTAGATAGTAAAGAAAAACGTGCACTTATAAGTTTTTTTTATTATTATAATCAATGTGTGAATTATGTTT 6248 0.4085 MGYDSESPSPNGRDEDDEEEYEDSGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPQTPADVVEQDCDEKAEDAVDYEDIDEEYDGPETEAANEEDYLLPKKEFFSAEASICLESKASVFDDENYDEESEKEQDFVNEDSKVDNISSVGKPEENFVDASKEESTLEHELHGDSLQAEELDAEGQKVEEEVPEVQKRSMSMPLPVLCVEDGMVILRFSEIFGIHEPLRKGEKREHRHSIPRDRYKSLDLTDDFVEEDEEEFLKSFSQSLSLTKQVFVDHSDASESNDVDLEFPKFGFLHADSTVARKDNQQSKDSCHSAEPMKGDFAEDLSREDHPFMWTNFYPLDQQDWEDEILWGNSPVPSNNNVESCEISGPELGASGGSEIEIESGVHNIEMERQKILEDKDHNAFICSSPVSLEPFGSRDSSGAKTNLTSRSLFHPQLLRLESRSEMDNSSLADGREAEISEHNQSGQVKRFTKVISQNRDMMEGSWLDKIIWEELDQPMVKPKLIFDLQDDQMHFEVLDSEDSTHLRLHAGAMILTRSLKSSSGDPSELPGNGSQYGWRYVANDKHYSNRKTSQQLKSNSKKRSAHGVKIFHSQPALKLQTMKLKLSNKDIANFHRPKALWYPHDNEVAVKEQGKLPTEGPMKIIIRSLGGKGSKLHVDAEETLSSFKAKASKKLGYFKPSETVKIFYLGRELEDHKSLAAQNVQPNTLIHLVRTKIHLWPKAQKVPDENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNVGMGARLCTYYQKCSPDDHSGSLLRNTDGSLGHIISLDPADKSPFLGDLKPGCSQSSLETNMYRAPVFPHKVPLTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEVFSPGSKNLQTYMMNRLLVHMCREFQAAEKRHLPPYIRVDEFLSQFPYQSEASFRKKIKEYANLQRGTNGQSILVKKRNFRMWSEDELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTNISSAMSRLPDEAIALASASHIERELQITPWNLSSNFVACTSQGKENIERMEITGVGDPSGRGMGFSYARAPPKAPVSSAMVKKKATANRGGTTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQIQSLSAVNGDENESDSEGNSDLDSFAGDLENLLDAEECEEGEEGTNVLKRDRGDGVKGLKMRRHPTVAQAEEEIEDEAAEAAELCRLLMDDDEADRKKKKKAKVMVGEARLLPKMQSKFAFDNAEQEESFPAKKSKSLKANKVKKNDTTPISLPNKKIKLNMGEGIKVGHMRTNKNCPKYGEDLETQLESTDMEKTSGKSSLVDPSSHLQHKAPSKKSISKSATKVAPVDNSTKIPLKFKCGSTEKSSDKPAIETLQSSDKPVTSDSETAKSAKVNKIIFPKKVKPDDTQAESRKHAIVIRPPTDSGRGRVDSPKFPIKIRPPTEIDRDQSHKKIVIKRTKEVIDLELDSPAGNTGLQHRKTKRIVELSNFEKHKKQETVYGAEGFVKWNTKEDRRWWDEQEKRRNDSRLREEDRARHHKEIRMLKEQERLDEIKRFEEDIRIDREEEERQKAKKKKKKKKPELRDEYLDDPRARRHDKRMPERDRSGKRRSVTELGKIGADYMPPTKRRRGGGGEVGLANILEGIVDTIVKDRYDLSYLFLKPVSKKEAPDYLDIIERPMDLSRIRERVRNMEYKSREDFRHDVWQITYNAHKYNDGRNPGIPPLADMLLEYCDCLLNENDDSLTEAEAGIETKDF 1842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00799 1842 Gene3D - 651 742 - -
Pste1g00799 1842 Coils Coil 1272 1292 - -
Pste1g00799 1842 MobiDBLite consensus disorder prediction 1485 1506 - -
Pste1g00799 1842 MobiDBLite consensus disorder prediction 1 29 - -
Pste1g00799 1842 MobiDBLite consensus disorder prediction 1603 1633 - -
Pste1g00799 1842 Gene3D - 22 68 IPR036741 -
Pste1g00799 1842 Pfam Protein of unknown function (DUF3591) 589 1156 IPR022591 -
Pste1g00799 1842 Gene3D - 1639 1841 IPR036427 GO:0005515
Pste1g00799 1842 Pfam TATA box-binding protein binding 19 61 IPR009067 -
Pste1g00799 1842 MobiDBLite consensus disorder prediction 1667 1700 - -
Pste1g00799 1842 MobiDBLite consensus disorder prediction 165 194 - -
Pste1g00799 1842 Pfam Ubiquitin family 671 742 IPR000626 GO:0005515
Pste1g00799 1842 MobiDBLite consensus disorder prediction 1328 1538 - -
Pste1g00799 1842 SUPERFAMILY Ubiquitin-like 639 740 IPR029071 -
Pste1g00799 1842 MobiDBLite consensus disorder prediction 1453 1477 - -
Pste1g00799 1842 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 13 1840 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Pste1g00799 1842 MobiDBLite consensus disorder prediction 66 91 - -
Pste1g00799 1842 SMART bromo_6 1717 1828 IPR001487 GO:0005515
Pste1g00799 1842 SMART ubq_7 669 742 IPR000626 GO:0005515
Pste1g00799 1842 Coils Coil 198 218 - -
Pste1g00799 1842 ProSitePatterns Bromodomain signature. 1743 1800 IPR018359 -
Pste1g00799 1842 ProSiteProfiles Ubiquitin domain profile. 669 740 IPR000626 GO:0005515
Pste1g00799 1842 SUPERFAMILY Bromodomain 1709 1831 IPR036427 GO:0005515
Pste1g00799 1842 ProSiteProfiles Bromodomain profile. 1738 1808 IPR001487 GO:0005515
Pste1g00799 1842 FunFam Transcription initiation factor TFIID subunit 1 651 742 - -
Pste1g00799 1842 MobiDBLite consensus disorder prediction 1398 1434 - -
Pste1g00799 1842 MobiDBLite consensus disorder prediction 176 194 - -
Pste1g00799 1842 MobiDBLite consensus disorder prediction 1652 1700 - -
Pste1g00799 1842 CDD Bromodomain 1727 1820 - -
Pste1g00799 1842 CDD Ubl_TAFs_like 669 741 - -
Pste1g00799 1842 Coils Coil 1639 1663 - -
Pste1g00799 1842 SUPERFAMILY TAF(II)230 TBP-binding fragment 23 62 IPR036741 -
Pste1g00799 1842 PRINTS Bromodomain signature 1755 1771 IPR001487 GO:0005515
Pste1g00799 1842 PRINTS Bromodomain signature 1789 1808 IPR001487 GO:0005515
Pste1g00799 1842 PRINTS Bromodomain signature 1741 1754 IPR001487 GO:0005515
Pste1g00799 1842 PRINTS Bromodomain signature 1771 1789 IPR001487 GO:0005515
Pste1g00799 1842 Pfam Bromodomain 1729 1804 IPR001487 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00799 669 740 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 34.722 1.01e-07 51.6