Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00772 CTCGGCTTGGCTTTTACTGTGCTCGCCAAGGCAGCCACGTCAGCATCTAAGTGGGTCCCACTCCTTCGGGCAGCTCAAATCTCCTTCCCGTCTTCTTCGGGCAGCTTACAAACCCCCTTTTCTGAGGAGGACCCCATATCTGTTATGTATGTATGTATCTTTGAGCGGAGATTACTGAGTTCAGCTCAGGGATTGGTACAGATGGGTTTAGGTGCTGAGAATGGTAAGGTGGTGGAGTCTTGGGATGAGTGTAAATCAAAGGGGAGGAAGAAGAAGAAGAAAGGAGATGAGAAGGTGAGAGGAGCTGAGGCTGGGTGTTGGGTTAGGCTGAGGTTCATTGGTAGCTGCATTTCCTCAAGATCCAAGGTTGATACATCTGTTAGTGGCAGTGGCACCAGTACTCATTATGCTGAAAGTAAATCAACTAATGATACTAGTAGAGACCAACCAACAGCTCCAGCAGTCTCTTCTACAACCACTAGCAACACGGAAAGCAATTCATCCACTTCCAAACTTGAAGAAGAGCTTAAAATTGCTTCCAGGCTGAGAAAGTTCTCTTTCAATGAACTTAAGTTAGCAACAAGAAATTTTCGGCCTGAGAGTTTTCTGGGTGAAGGTGGCTTCGGTTGTGTTTTCAAGGGGTGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACTGTTGCTGTAAAAACCCTGAACCATGACGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAATTTTCTTGGTGACCTAGTTCATCCAAACCTTGTTAAACTTGTAGGTTACTGCATTGAAGATGATCAAAGGTTGCTAGTGTATGAGTTCATGCCTCGGGGTAGCCTGGAAAATCACTTATTTAGGAGATCCCTGCCTCTTCCTTGGTCCATTAGAATGAAAATTGCGCTAGGAGCTGCTAAGGGCCTTGCTTTTCTTCATGAAGAAGCTGAACGACCAGTAATATACAGGGATTTTAAAACATCGAATATATTACTAGATGCAGAGTACAATGCCAAGCTCTCAGACTTTGGTCTTGCCAAAGATGGTCCAGAAGGTGATAAAACCCATGTGTCTACTCGAGTGATGGGAACCTATGGTTATGCAGCCCCAGAATATGTTATGACGGGTCATCTTACATCAAAAAGTGATGTGTACAGTTTCGGAGTGGTACTACTTGAGATGATGACTGGAAGAAGATCCATGGACAAACACCGACCCAACGGTGAACATAACCTTGTGGAATGGGCTCGACCACATCTAAGCGAGAGGAGAAGGTTCTACCGGTTGATAGATCCTCGGTTGGAAGGGCACTTTTCCATAAAAGGAGCTCAGAAAGCTGCCCAACTGGCTGCTCACTGCCTTAGTAGAGATCCAAAAGCCAGACCCCTTATGAGTGAAGTTGTGGAAGCTTTAAAGCCTTTGCCAAACCTTAAGGACATGGCAAGCTCTTCATATTATTTCCAGGCAATGCAAGCTGATCGATTTGGAGCTAGCCCGAACACGAACTCGAGAAACGGGCGAGCCCAAGGAGCATTGCTCACACGCAATGGACAGCAGCAAAGGAGCCTTTCAATACCTAATGGTGCTTATGCATCTCCATACCACCACCAGTTTCCCCAACCATCACCAAAACCCAATGGCAAAGCATAGAGTTGGTGAAATTTTTCTTTTTCTCTTTCACCTTTTAAGCCATTTCTTAGTTTCTCCTTATAGATGTATCTTCTTTCAGAGCATTTGTTCACGGAGAACCTTAGAGCAAAAGAAGCATTAATATTATGCTTTTTATGATGTTATGTTATTGGTGTTACCCTCTTTAGCTTGAAAGAATGTCAGGGTGAGTTCAGGTGAAGCTCATTGAGCTGCTGTCTCTTATGTCAAATTGTCATTCAATATTTTCTTCAGCTTGTTTGAAAATATTGAATACTATTTATACTTATCCTTATTTTATATTGTTTTTCACATTTGTCATTAGAAACTTATCTCTTTATTCATTTAGATTTTGCTTGTGGCAATCCCTGCAGCTTCTTAAATTAGTCTATAG 2059 0.4332 LGLAFTVLAKAATSASKWVPLLRAAQISFPSSSGSLQTPFSEEDPISVMYVCIFERRLLSSAQGLVQMGLGAENGKVVESWDECKSKGRKKKKKGDEKVRGAEAGCWVRLRFIGSCISSRSKVDTSVSGSGTSTHYAESKSTNDTSRDQPTAPAVSSTTTSNTESNSSTSKLEEELKIASRLRKFSFNELKLATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMMTGRRSMDKHRPNGEHNLVEWARPHLSERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQAMQADRFGASPNTNSRNGRAQGALLTRNGQQQRSLSIPNGAYASPYHHQFPQPSPKPNGKA 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00772 555 SUPERFAMILY Protein kinase-like (PK-like) 175 477 IPR011009 -
Pste1g00772 555 Gene3D Phosphorylase Kinase; domain 1 156 282 - -
Pste1g00772 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 326 338 IPR008271 GO:0004672|GO:0006468
Pste1g00772 555 ProSitePatterns Protein kinases ATP-binding region signature. 203 235 IPR017441 GO:0005524
Pste1g00772 555 PANTHER OS01G0588500 PROTEIN-RELATED 160 480 - -
Pste1g00772 555 FunFam Serine/threonine-protein kinase BIK1 164 282 - -
Pste1g00772 555 ProSiteProfiles Protein kinase domain profile. 197 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00772 555 MobiDBLite consensus disorder prediction 122 173 - -
Pste1g00772 555 FunFam Probable serine/threonine-protein kinase PBL8 283 498 - -
Pste1g00772 555 MobiDBLite consensus disorder prediction 520 555 - -
Pste1g00772 555 CDD STKc_IRAK 203 480 - -
Pste1g00772 555 Gene3D Transferase(Phosphotransferase) domain 1 283 497 - -
Pste1g00772 555 Pfam Protein tyrosine and serine/threonine kinase 202 477 IPR001245 GO:0004672|GO:0006468
Pste1g00772 555 MobiDBLite consensus disorder prediction 122 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00772 Pste-Chr1 2414503 2419098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00772 144 477 Glycoside Hydrolase AT3G07070 54.006 4.00e-118 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste1g00772 PK_Tyr_Ser-Thr 1.6e-46 CL0016