Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00767 ATATGAAAGCTCACTCCGTTCAGTTCCCTCTTTATATGTTCCTACTGGTTGCATTTCACATTCCACAGCTGGTTGTTGGAACTGCGGAGCTTAGAGCTTTGATGGAATTGAAGTCCTCTTTGGATCCAGAGGGCAAGATCCTTGGCTCGTGGATCAGTGATGGTGATCCATGCAGTGGCTTCTTTGAAGGTGTTGCGTGCAATGATCACCGTAAAGTGGCTAACATCTCCTTGCAAGGAAAGGGTCTTTCGGGTTGGCTCTCTCCAGCACTGGCGGAACTCAAATGCTTGTCGGGATTATACTTGCACTACAACAATCTTTCTGGTGAGATACCCCCACACATTTCAAATCTCACTGAGCTGGTTGATCTCTATCTCGATGTGAATAGTTTATCTGGAACTATTCCTCCTCAGCTTGCCACCATGACTAATCTCCAAGTGCTGCAGTTGGGAGATAACCAGTTGGTGGGAAATATACCAGCACAGATGGGTTCCTTAAAGCAGCTTAGTACTCTAGCTTTGCAGTATAACAAGTTAAGCGGTCACATTCCTCTTACCTTGGGGAACTTGGAGAAGTTAAGCAGGCTAAATTTGAGCTTCAACAACTTCAATGGTACTATTCCGGCAACACTAGCACGTATTGAACATTTGGAAATTCTAGATGTTCAGAACAATTCTTTATCAGGAATTGTTCCTTCGGCATTGAAGAAACTTGGGGAAGGATTCCAAAGTGCAAACAACCCGGGTTTGTGTGGAGTAGGATTTTCAAATTTGAGACCATGCAACAAAGATCAAGATTTAAACGTTAACCATATTGATACTTCAGATGGAGAACAACACCAAAATAGTAATTCTTCAAAGGCGCTCCCAGAGCCTGCATATGTTCAGTTGCACTGTGGCCAGAGCCATTGTTCAAAATCAAGAAGGTTTCCTCAAACTGTTATCACAGCAGGTGTTGTAATTGTTACTCTTACATTCATATGCACTGGATTTTTAACATTCTTCAGATACCGCCGTCAAAAGCAGAGGATTAGTAACACATCAAGTTCCTCTTCCGATGGGAAACTTAGTCCTGACCAGCCCAAAGAGTTCTACACAAAGAGTCCATCTGCACTTGTTAATATTGAGTATTATAGTGGATGGGATTCATTATCTAATGGTCAAAATGCTGATGCTGGTGGATTATCCAACGAGTATCTAAATCAGTTTAGGTTTAATGTGGATGAGGTTGAATCTGCAACTCAGTATCTCTCGGAAGCAAATTTACTAGGAAAGAGCAAATTCTCAGCAGTTTATAAAGGAGTTCTCAGAGATGGTTCGCTTGTAGCTATTAGAAGCATTAGTGTTACATGCTGCAAAACTGAGGAAGCTGAATTTGTAAAGGGGTTGAACTTATTAACCTCTCTGAGACATGAAAACCTTGTTAGGCTGAGAGGCTTTTGTTGCTCAAGAAGTAGAGGTGAGTGTTTCCTTATCTATGATTTTGCCACCAAGGGTAACCTGTCTCAATATCTTGACATAGAAGATGGAAGTATTGGATATCTGCACAGCAATGAAGCAAGCAAACCTACAATTGTTCACCAGAATATTTCAGTGGAAAATGTTCTCCTAGACCATCAATTTAGCCCATTGATCATGGATGCTGGGCTACCAAAGCTTCTTGCAGATGATGTTGTTTTCTCAGCTCTAAAAGTAAGTGCTGCGATGGGATACTTAGCTCCCGAATACATCACTACAGGACGATTTACTGAGAAGAGTGACATATACGCATTTGGAGTTATTATTCTTCAAATTCTTTCTGGCAAGACCACAATAGGCAGTTCAATACGGATGGCAATTGAGTCTTTCAGATTTGATGATTCTGTGGATACAAATCTAAAGGGAAGATATTCTAAATCTGAAGCAGCAATACTTTCAAAGCTTGCAATACAGTGTACTCATGAGCTTCCTGACCAAAGACCAACCATAGTGGATGTGATTCAGGAGCTGAGCGTGTCTTCTGCTCATTTA 2009 0.4136 MKAHSVQFPLYMFLLVAFHIPQLVVGTAELRALMELKSSLDPEGKILGSWISDGDPCSGFFEGVACNDHRKVANISLQGKGLSGWLSPALAELKCLSGLYLHYNNLSGEIPPHISNLTELVDLYLDVNSLSGTIPPQLATMTNLQVLQLGDNQLVGNIPAQMGSLKQLSTLALQYNKLSGHIPLTLGNLEKLSRLNLSFNNFNGTIPATLARIEHLEILDVQNNSLSGIVPSALKKLGEGFQSANNPGLCGVGFSNLRPCNKDQDLNVNHIDTSDGEQHQNSNSSKALPEPAYVQLHCGQSHCSKSRRFPQTVITAGVVIVTLTFICTGFLTFFRYRRQKQRISNTSSSSSDGKLSPDQPKEFYTKSPSALVNIEYYSGWDSLSNGQNADAGGLSNEYLNQFRFNVDEVESATQYLSEANLLGKSKFSAVYKGVLRDGSLVAIRSISVTCCKTEEAEFVKGLNLLTSLRHENLVRLRGFCCSRSRGECFLIYDFATKGNLSQYLDIEDGSIGYLHSNEASKPTIVHQNISVENVLLDHQFSPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIILQILSGKTTIGSSIRMAIESFRFDDSVDTNLKGRYSKSEAAILSKLAIQCTHELPDQRPTIVDVIQELSVSSAHL 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00767 669 Gene3D Phosphorylase Kinase; domain 1 384 494 - -
Pste1g00767 669 SUPERFAMILY L domain-like 29 236 - -
Pste1g00767 669 Gene3D Transferase(Phosphotransferase) domain 1 504 668 - -
Pste1g00767 669 FunFam Protein NSP-INTERACTING KINASE 2 26 175 - -
Pste1g00767 669 Gene3D Ribonuclease Inhibitor 182 247 IPR032675 -
Pste1g00767 669 MobiDBLite consensus disorder prediction 265 286 - -
Pste1g00767 669 Pfam Protein tyrosine and serine/threonine kinase 420 662 IPR001245 GO:0004672|GO:0006468
Pste1g00767 669 SMART LRR_typ_2 189 212 IPR003591 -
Pste1g00767 669 SMART LRR_typ_2 93 117 IPR003591 -
Pste1g00767 669 SMART LRR_typ_2 213 236 IPR003591 -
Pste1g00767 669 SMART LRR_typ_2 141 165 IPR003591 -
Pste1g00767 669 Gene3D Ribonuclease Inhibitor 26 181 IPR032675 -
Pste1g00767 669 SUPERFAMILY Protein kinase-like (PK-like) 396 663 IPR011009 -
Pste1g00767 669 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 156 664 IPR046959 -
Pste1g00767 669 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Pste1g00767 669 ProSiteProfiles Protein kinase domain profile. 416 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00767 669 FunFam Protein NSP-INTERACTING KINASE 2 387 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00767 Pste-Chr1 2398260 2400984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00767 10 508 Miscellaneous Gene Families AT4G22730 56.548 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pste1g00767 PK_Tyr_Ser-Thr 9.4e-28 CL0016