Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00752 ACCCAATTAATTCAACAAGCGAGCATGGATTTGGGGAAGGGGAAGGGGAAGGGAGCAATAGGAAGTAGGAGCAGGTTGGGGTTTGTGTGGATGGCGTTGAGGCTGACTGTGGCAGCAGCTTTGGAAGCTGAAAGCGCAATAGAGGCGTCGCTGAGGGAAGCCTTCGAGTCTCTCCAACCATCTCTGAGACCTCCTTTCTCCTTAGCCATTCCAAGCCCAGACCAATACGCCCTCCTCAACCGCGCTATCCTTCACGCCGTCTTAACGGAGCCCCATTTCGCCGTTACCCACTTCAAACACTTGCACGCCCTCGTCACCGACGGTTACGCCTCCTTCGTCCACTTAATCCTCAACCTCGTTCTCCTTCTCTTCCCCAAACTCCTCCCCTCCGTCAAAACCCAGTTACTCTGGGCCACTCACCAAACTGTCCGCCTTTCCGCCATCGGCTACGACGCCGTTTTGTTCTCCCTTTTCCGCCATATTTCTGCCGCCGATTACACCGAACCCAACCTCTCTCTCTGCTTCCAACTAGTCACCCTCTTTTTCGAACAATTCCACCGCTTATTGGAAGACGCCCCTCACCTTTTCTCCTTTGCCTTGTACACCTTTCTTAGGGTTTTGGCTGATCACTCTAGGGTTACTCTTCAACAGTTGGAACCTTTGAAGCGCTTGGAGATTCACCTCTGTGTCAAGATACTTCGGGAACACTTTCACCTCTGTTTCAAAATTGGGAGGGATATTATTCGCTTGTTGCAGGATTTGATTCACGTCCCCGAGTTCAAGGCTATATTACAAGACATTGTCTATAATCCCTCTGCCTTTAATGTTGTCGGGTTTAAGTTTAACGATGTTTCTCAGATTTTCAGCACCAGGACTTCCAGCAGGTACTCACTTCTTCGGATCAGTCCTGAGATGGAAACCCAACTGAGGTTTTTGCTAACAAACATAAAATTGGGGCATCAGAAGAGGCACCAGCTTTGGTTTGCTAACAAGTTTTTGAATGAGCCTGATAAGGAGTTTCTTATAGTTGATATTGTCAGGTTTATATGCTGTGCACACCACCCTCCAAATGAGATCATTCAATCTGATATTGTTCCTAGGTGGGCACTTATTGGTTGGCTTTTGACCTGTTGTAGGAGGAACCATGCTATGGCTAATGTCAAACTGGCTTTGTTCTATGACTGGCTCTTCTTTGATGAAAGAGTGGATAATCTCATGAACATTGAGCCTGCGCTTCTGCTCATGGTGCATTCTGTTCCCAAGTACGTTGAGATTACTCATGCTCTTCTAGAGTTCTTGTTGCATCTTGTGGACAATTACGATGTGGAACGGAAGACTATCATAGTCAAAGGTGTGTCATCAGCTTTTCAGTTGCTTGTTCGCAAAGGGGTGGTTCCTTCGCTCGATATTTTGACTTCTTGTTCTGCACTTAATCCCGGTCTGAGAGAGGGTCTGAAAAGGTTAGTATCAGAAAAAATGGCTTCAGATGGCAATAACCCTACTGAAGGTGGTATTGAAAGTGCAAAGGATACTGCAAGTAAAAGTAAACCAGGACTAATGACTGATGCTGCATGGAACATTGTGTTTCAGTTGATGGGAGTGCAAAAAATGTGCGATGCAAATATTAAACATCAAAGGATGTTACCCTGTAAAGATTTTCTAAAAGATGTTCAAAAGTTAATGATGTTGAATAAATTTTCGTGGTTGGCCAAGTCTATTCTGTGGCTCTTGGAAACATCAATTCCAGGAGTAACAGAACCCATGCTATACATTGGAATGCTGCTTAGCATGTTTGCTTGGCATGTGGAAGATCATTATTTATACAGCGTTAATTATCATCATTGTGGAGCATCAAAAACTTGGTATGGCATTCCAGGTCATGCAGCTTTGGAATTTGAAAGGGTGGTGAGAGAACATGTGTATACTAATAATATTTTGTCAACTGGTGGGGAAGATGGAGCCTTTGATGTTCTCCTGGGGAAAACAACTTTGTTCCCACCAAATATTTTGTTGGAGCATGAAGTCCCTGTCTACAAGGCTGTTCAAAATCCATGGGATTTTGTAATAACTTTCCCCAGAGCAATCATGCTGGCTTCAGTCATGGTAAGATTTATTTTTGCAAATATTAACTATTCAGTATATTTAGTTCCGAAGGATATGTCCATGTTTCAACTTGGTTTCAACTGTGGAGAAGCGGTGAACTTTGCAATTGGTGATTGGTTTCCTTTAGGGGCTATTGCTAGCCAAAGATATGTACTTCTTCAGAGAGTGCCTTTGCTGCCCCATGAAGAACTTTTATGCAAAGAATTAATGCTTCTGTATGCAAGATTAAAACTTGAAGATTCAGACGTTCCCTCTGAAGATTTGTTATCTCATAATTGTGTTAAGATTTCTTTTGTTAATTTGATGCGCTTTCAACATTGTGCTCGTTGGCTCTTAATGAAATCAATGGCATGTATAGGCGTTTCCTCACATTCCCAGGGTGTAATTCTCTGTAGCCTCTGCAAACGAGACTGTTATGTAGCTTATGTTGATTGTGAATGTCACATGCATCCAGCATGCCTTTGTCATGGGGGGAGTGAACGCCTTGTTGATGCTGCCATTGCACAGTTAAAGAAGTTCCATTTTACCATTCCTTTTGGAATCGAACCACAATACCTTCTTTGGCAACAGGAACGGGAAAAGAATTGGAGAAAGGCAAAGGGAAAGAGAGTTGCCAACTCAGGGAGAGATGCCTCTACTCTGCTTCTAAATGTTTGTGGTAACATGTGGTTTCAGGGTATTAAGCGAAATTCAGTCCTTCAGACACAACGTGGGAGTTCCGGTATTCGCCGCAAGTACAGGATTCATGAGGGTGATGGAGGAGGATTAACTTGTAGATGCTCATTTTCACCTTCTGGCAAAGCTGGAGAAAAGCGAAAAGAAGAAGAGACGATAAAACTTGAGGGGCCTCTGGGCAATGAAAATCTTGCACGTACAGTTCTTGTAGAATCTGTGAATAGCTACCCTTGGAACTGGAATGCCTGGATCGAGCTGCAATCTTTGTCCAAAAAATCGTTGGATGAAGGACTTTTCCCTTGCCAGTGTTTACCAAGAATTAAGTGTTGTGGGATTGCATCATTAAGGATGCATAATGACTCTGTCAAGGCACAAATTGCAAAAGCCCGGTACAGTTTGAGGGAATTTGATCAAGTTGAAGCAATATTTGAAGAACCGTTGAAGAATGATCCTTACAGGGTGGAAGACATGGACGTGTACTCCAATGTGCTTTATGCAAAGGAATGCTTTTCTAGTTTGAGTCATCTAGCCCATAGAGTATTCATGACTGATAAATACAGACCTGAATCTTTTTGTATTATTGGAAATTATTACAGTCTAAAGGGGCAGCATGAAAAGTCCATTGTGTATTTTAGAAGAGCCCTTAAATTGGACAAAAATTGTTTGACTGCTTGGACACTTATGGATCATGAGTTTGTTGAGATGAAAAACACTCCTGCTGCTGTGGATGCCTATCGTCCAGCTGTAGACATAGACCCGTGTCACCGTGCGATTATCATGCTTGGACAGGCCTATGGGATGATGGTCATGCCTTTCTATGCACTTCATTACTTCAAAAGATCTGTATTCTTGCAGCCACGTGACTCTCAGTTGTGGATTGCAATGGCTCAGTCTTATGAAAGTGATCAACTTCGTATGCTTGATGAAGCAATAAAGTGTTACAAAATGGCGGCAAATTGTAATGATAAAGAAGCAATTGCTCTCCACCAGCTAGCAAAGCTGCACTCAGAGCTAGGGCACACTGAAGAGGCCGCATTTTACTACAAAAAGGATTTGGAGAGGATGGAATCTGAAGAGAGGGAAGAACCTACGATGGTTGAGGCTTTGCTCTATCTTGCAAAATATTACAGAGCACAGCAAAGATTTGATTTGAGGAAGCAGATATTTACTGTACACGAGAGAGAAACAGCAAAGAGTTTACTTAGAGGAATGCAATTGACACAATCTAGTTTCCCTTGTATGGATGTTGAGCACTTTCCTCCCCAATTTCTTTTGACAAAGATCAGAAGATGGGTGTTCTATGCTAAATTTATCAGTTTT 4098 0.429 TQLIQQASMDLGKGKGKGAIGSRSRLGFVWMALRLTVAAALEAESAIEASLREAFESLQPSLRPPFSLAIPSPDQYALLNRAILHAVLTEPHFAVTHFKHLHALVTDGYASFVHLILNLVLLLFPKLLPSVKTQLLWATHQTVRLSAIGYDAVLFSLFRHISAADYTEPNLSLCFQLVTLFFEQFHRLLEDAPHLFSFALYTFLRVLADHSRVTLQQLEPLKRLEIHLCVKILREHFHLCFKIGRDIIRLLQDLIHVPEFKAILQDIVYNPSAFNVVGFKFNDVSQIFSTRTSSRYSLLRISPEMETQLRFLLTNIKLGHQKRHQLWFANKFLNEPDKEFLIVDIVRFICCAHHPPNEIIQSDIVPRWALIGWLLTCCRRNHAMANVKLALFYDWLFFDERVDNLMNIEPALLLMVHSVPKYVEITHALLEFLLHLVDNYDVERKTIIVKGVSSAFQLLVRKGVVPSLDILTSCSALNPGLREGLKRLVSEKMASDGNNPTEGGIESAKDTASKSKPGLMTDAAWNIVFQLMGVQKMCDANIKHQRMLPCKDFLKDVQKLMMLNKFSWLAKSILWLLETSIPGVTEPMLYIGMLLSMFAWHVEDHYLYSVNYHHCGASKTWYGIPGHAALEFERVVREHVYTNNILSTGGEDGAFDVLLGKTTLFPPNILLEHEVPVYKAVQNPWDFVITFPRAIMLASVMVRFIFANINYSVYLVPKDMSMFQLGFNCGEAVNFAIGDWFPLGAIASQRYVLLQRVPLLPHEELLCKELMLLYARLKLEDSDVPSEDLLSHNCVKISFVNLMRFQHCARWLLMKSMACIGVSSHSQGVILCSLCKRDCYVAYVDCECHMHPACLCHGGSERLVDAAIAQLKKFHFTIPFGIEPQYLLWQQEREKNWRKAKGKRVANSGRDASTLLLNVCGNMWFQGIKRNSVLQTQRGSSGIRRKYRIHEGDGGGLTCRCSFSPSGKAGEKRKEEETIKLEGPLGNENLARTVLVESVNSYPWNWNAWIELQSLSKKSLDEGLFPCQCLPRIKCCGIASLRMHNDSVKAQIAKARYSLREFDQVEAIFEEPLKNDPYRVEDMDVYSNVLYAKECFSSLSHLAHRVFMTDKYRPESFCIIGNYYSLKGQHEKSIVYFRRALKLDKNCLTAWTLMDHEFVEMKNTPAAVDAYRPAVDIDPCHRAIIMLGQAYGMMVMPFYALHYFKRSVFLQPRDSQLWIAMAQSYESDQLRMLDEAIKCYKMAANCNDKEAIALHQLAKLHSELGHTEEAAFYYKKDLERMESEEREEPTMVEALLYLAKYYRAQQRFDLRKQIFTVHERETAKSLLRGMQLTQSSFPCMDVEHFPPQFLLTKIRRWVFYAKFISF 1366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00752 1366 Gene3D Cupin 491 790 - -
Pste1g00752 1366 Pfam JmjC domain, hydroxylase 588 695 IPR003347 -
Pste1g00752 1366 Gene3D Tetratricopeptide repeat domain 1111 1316 IPR011990 GO:0005515
Pste1g00752 1366 Pfam Tetratricopeptide repeat 1253 1285 IPR019734 GO:0005515
Pste1g00752 1366 ProSiteProfiles JmjC domain profile. 555 752 IPR003347 -
Pste1g00752 1366 MobiDBLite consensus disorder prediction 493 513 - -
Pste1g00752 1366 SMART tpr_5 1114 1147 IPR019734 GO:0005515
Pste1g00752 1366 SMART tpr_5 1181 1214 IPR019734 GO:0005515
Pste1g00752 1366 SMART tpr_5 1215 1250 IPR019734 GO:0005515
Pste1g00752 1366 SMART tpr_5 1251 1284 IPR019734 GO:0005515
Pste1g00752 1366 Gene3D Tetratricopeptide repeat domain 983 1110 IPR011990 GO:0005515
Pste1g00752 1366 MobiDBLite consensus disorder prediction 494 508 - -
Pste1g00752 1366 PANTHER INTEGRATOR COMPLEX SUBUNIT 3 34 514 IPR045334 -
Pste1g00752 1366 SUPERFAMILY Clavaminate synthase-like 549 694 - -
Pste1g00752 1366 SMART cupin_9 552 752 IPR003347 -
Pste1g00752 1366 ProSiteProfiles TPR repeat profile. 1114 1147 IPR019734 GO:0005515
Pste1g00752 1366 Pfam Integrator complex subunit 3 N-terminal 75 486 IPR019333 -
Pste1g00752 1366 ProSiteProfiles TPR repeat profile. 1148 1181 IPR019734 GO:0005515
Pste1g00752 1366 SUPERFAMILY HCP-like 1115 1307 - -
Pste1g00752 1366 Pfam Tetratricopeptide repeat 1115 1147 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00752 Pste-Chr1 2353295 2363558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00752 572 777 C2H2 Transcription Factor Family AT5G04240 38.835 2.22e-38 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pste1g00752 Ints3 4.2e-93 No_clan