Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00745 GGAAATTTGTGTGACTGCGGTTTGCTGCGTAGGGAAATGGTTGCTCCCTGGGTCTTGTGGTAGTGGCAGTCTGCGTTTGTTGTCCAAAGAGTTGCTCCTTTGATTTTCAACCCAATATGGGATTCCACGGCGATCTCAAAACGGCATCGTTTTGATGACTCCAGAGGCAGAGCAAGGAAGCTGGTAGCAGAACCCGAAGCAAAGAAGCAGTGATAGTTCACATGGGATTGGCACCAACGGCGAGAATAAGAAGAATCATCGAAGGTTCTAAACACAACGCCGATGATGGAGCTGCGCGCCTCAATCAACCGATCCTTCGACGACCTCTACACGCGCCACGCCCGCGACTCGCTCGACGAATTGCCTGACAGCTTCACCATCACAGACCCCTCCATCCCGGGCCACCCCATCGTCTTCGCCAGCCCGGGCTTCCTCAAGCTCACGGGCTACGCTCGCCGCGACGTCCTGGGCCGCAGCGCCTCCATTTTTCAGGGCCCCTCCACTTCCCGAAGGGCTGTTTTGGAAATTCGCGAGGCCATCCGAGAGGAGCGTCACACCCAGGTCGTTTTGCTCAACTACCGCAAGGACGGCACGCCCTTTTGGATGCTCTTCCGCGTTTCCCCTGTTTTCAGCACCGACGGCGGCGCCCTCGTTCACTTCGTCGCCGTTCAGGTCCCTCTTCAGAAAAAGGACGGCTCCGGCGTCAGGGACTTCGGCTTCGGCTGCTGCCGGAAGGAAGTCTGCGCTGATTCGTTGCCGGAACTTGGTCGCGTTTCTTCATTTGAGCAAGTCCTCCATCCTGATGATGTCAGAGAAGTGGAGAGAGAAGAGCCGTGTGAGGCGAGTGATGATGAGAAGCAAAGTGCTGTTACTGCCATGGATAACATCTTTTCTGTGCTAACCCATTATAGTGAGGCAACGGGAAGATTGGTGTGTAGGAAGAGGTGCAGCATTCCTGACGTTGGTCTTTTGAGCACATCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTCTCATATTTACTTGTGTTTTCCAATATCCTGTCTATAGGTTATGCAAGAAACGAAGTTTTGGGCCACAACTGTAGATTTTTAGGTGGAACAGATACTGATACTTCAACTTTACATCTGATAAGGGAAAGCATTAAAACTGAGCAACCATGCACAGTACGTATTTTGAATTACAGGAAAGACAAAAGCTCTTTTTGGAATTTTCTTCATATCTCATCTGTTCGTGATGCTTCTGGAAAGGTAGCATACTTTGTGGGAGTTCAAATAGAAGACAGCAATAAAAACGATGATAGGCAGTGTTTGAGTCCTGAGAAGAGGCAGCTTAGTGTGGTTGGTGTAGTCAAGGTTGCAGTGAGGAGTTTATCAATGACTGCGGGATCTTCCAAGTCATAGCGAAAGGATCATGTAATAGATATAATTAAAGTTGCCTACTTCCCATAAATATTAATCCATTTTGAAAAAATTATCAATCTCAACTGGTGATACTTGAGATGATAGAAAGGTATAAAAATTAATTTGTGAAGAAAAAAAGTCTATATTTTCTATTCTCAATTGTAAGAAAACATTCTGCTACGGAGGTCTATAAATAAAATGTATGTATTCTATTTCCGCGGACTGTTTTAAGGAACTTTATATTCCGTAATGTAGCAATAAAAATTGACATG 1685 0.4641 MMELRASINRSFDDLYTRHARDSLDELPDSFTITDPSIPGHPIVFASPGFLKLTGYARRDVLGRSASIFQGPSTSRRAVLEIREAIREERHTQVVLLNYRKDGTPFWMLFRVSPVFSTDGGALVHFVAVQVPLQKKDGSGVRDFGFGCCRKEVCADSLPELGRVSSFEQVLHPDDVREVEREEPCEASDDEKQSAVTAMDNIFSVLTHYSEATGRLVCRKRCSIPDVGLLSTSLIISLGRIKQSFVFSYLLVFSNILSIGYARNEVLGHNCRFLGGTDTDTSTLHLIRESIKTEQPCTVRILNYRKDKSSFWNFLHISSVRDASGKVAYFVGVQIEDSNKNDDRQCLSPEKRQLSVVGVVKVAVRSLSMTAGSSKS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00745 376 SUPERFAMILY PYP-like sensor domain (PAS domain) 260 334 IPR035965 -
Pste1g00745 376 Gene3D PAS domain 16 137 - -
Pste1g00745 376 Pfam PAS domain 29 130 IPR000014 -
Pste1g00745 376 Pfam PAS domain 259 334 IPR000014 -
Pste1g00745 376 SUPERFAMILY PYP-like sensor domain (PAS domain) 28 128 IPR035965 -
Pste1g00745 376 NCBIfam PAS domain S-box protein 42 125 IPR000014 -
Pste1g00745 376 ProSiteProfiles PAS repeat profile. 16 89 IPR000014 -
Pste1g00745 376 FunFam Protein TWIN LOV 1 isoform D 30 208 - -
Pste1g00745 376 PANTHER PROTEIN TWIN LOV 1 7 247 - -
Pste1g00745 376 ProSiteProfiles PAC domain profile. 295 349 IPR000700 -
Pste1g00745 376 CDD PAS 27 121 IPR000014 -
Pste1g00745 376 Gene3D PAS domain 257 374 - -
Pste1g00745 376 SMART pac_2 93 136 IPR001610 -
Pste1g00745 376 SMART pac_2 298 340 IPR001610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00745 Pste-Chr1 2325725 2330449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00745 17 367 AGC Kinase Gene Family AT5G58140 27.654 3.11e-45 164