Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00728 GTCCTTTGCTTTTATGCTTAGCTGCTCTGATTTCTTCATCTTTGATTAGGAAACTGCTTCATGTCTATAATGCCGAAAACATCACAGGTTATTAGATGCAAAGCTGCGATATGCTTGGGGATAGGAAAAGGTGTGACGGTGGAAGAGATTGAAGTAGACCCACCCAAAGCAACAGAAGTTCGAGTTAAGATGCTTTGTGCCAGTATATGCTCCACAGACATCTCTAGCACCAAAGGATTCCCACATACCAATTTTCCTATAGCACTTGGTCACGAAGGAGTTGGCGTGATAGAGAGTGTTGGTGATGAAGTGAGAAATCTGAAAGAAGGAGATGTGGTAATTCCGACATACATAGGCGAATGTCAGGAATGTGAGAATTGTGTTTCAGATAAAACCAATTTGTGTCTTACGTACCCAGTAAGATGGACAGGTCTAATGCCAGATAACACTTCAAGGATGTCCATGGGAGGACAGAGGGTATACCATGTTTTAAGTTGTGCGACATGGTCAGAGTACACGGTTAGTGATGCCAACTACGTTCTCAAAGTTGATCCAACCATTGATCCAGCCCATGCCAGTTTCATCTCATGTGGCTTTTCAACTGGATTTGGAGCTGCTTGGAAGGAAGCAAAGATTGAAAGTGGATCCACTGTAGCTGTTTTCGGTCTTGGGGCTGTTGGATTAGGGGTTGTAATTGGAGCCAAAATGCAGGGAGCAACTAAGATAATTGGAATTGACATAAACGAGAAAAAAAAAGAGAAAGGACGAGTTTTCGGAATAACTGACTTTATAAATCCGGGTGATTCTGATAAACCTATTTCAGAATTGGTCAAGGAACTAAGTGATGGCATGGGTGTGGACTATTCCTTTGAGTGTACTGGTGTCTCCACTCTACTTTCTGAATCCTTGGAAGCCACCAAAATGGGAACAGGTAAAGCAATAGTAATTGGTGTAGGAACTGAACTCACTTTGCCATTGGGTCTTTTTGCCATTCTGCTTGGTAGAACTTTGAAAGGTTCTGAATTCCCTCTTGAAGAACTTGTCACCCATGAGGTCACATTGAAAGAAATAAACAAAGCACTTGAGCTTGTGAAGCAGCCTAATTGTGTGAAAGTTGTCATCAACATGTCATAATAGCGCAATTGAAGGAAGTCTTCAGCAAAACATTCACTTGCCAGTTGCTACTCTTCAATCTTCATCATTATTTTTATGTATTTTGACTTTTTTACAGTTTGATTTATTCATCGTCAGTTGTCGGATTAATTCAACGCCTGCGCGTTTATTGTATACTAGCCAAAACATACGTTAATCCAGAAAATTCAAGCTGTGGGATTCAGATGTTGCTTATGGTTGTTGGAGATCTCATATTACCTAGTGATATGGCTAAATAAAAATATATAATAAAG 1406 0.4033 MSIMPKTSQVIRCKAAICLGIGKGVTVEEIEVDPPKATEVRVKMLCASICSTDISSTKGFPHTNFPIALGHEGVGVIESVGDEVRNLKEGDVVIPTYIGECQECENCVSDKTNLCLTYPVRWTGLMPDNTSRMSMGGQRVYHVLSCATWSEYTVSDANYVLKVDPTIDPAHASFISCGFSTGFGAAWKEAKIESGSTVAVFGLGAVGLGVVIGAKMQGATKIIGIDINEKKKEKGRVFGITDFINPGDSDKPISELVKELSDGMGVDYSFECTGVSTLLSESLEATKMGTGKAIVIGVGTELTLPLGLFAILLGRTLKGSEFPLEELVTHEVTLKEINKALELVKQPNCVKVVINMS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00728 357 FunFam S-(hydroxymethyl)glutathione dehydrogenase 182 320 - -
Pste1g00728 357 SUPERFAMILY GroES-like 7 194 IPR011032 -
Pste1g00728 357 Gene3D - 182 320 - -
Pste1g00728 357 PANTHER ALCOHOL DEHYDROGENASE 9 348 - -
Pste1g00728 357 CDD liver_alcohol_DH_like 11 354 - -
Pste1g00728 357 FunFam alcohol dehydrogenase 1-like isoform X1 21 181 - -
Pste1g00728 357 Pfam Zinc-binding dehydrogenase 205 323 IPR013149 -
Pste1g00728 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 167 321 IPR036291 -
Pste1g00728 357 Pfam Alcohol dehydrogenase GroES-like domain 38 162 IPR013154 -
Pste1g00728 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Pste1g00728 357 Gene3D - 17 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00728 Pste-Chr1 2282937 2286315 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00728 38 319 Monolignol Biosynthesis Gene Families AT2G21730 28.276 3.39e-14 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00728 1 2282937 2286315 Pste1g00728 1 2282937 2286315 ECH