Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00723 TTTCAGATGAAGTTGAAGAGGAAAACATACATCTGTTTCTTACTGTTGGGGTTGAGAAGGGAGTGATGATTTTTCAGCATGAATTTCACCCCTTATTGTTGGGTGTACCAGGGAGTGGGAAGTCCACCTTCTGTGAAGAAGTTACACGAATTTCACCCCTTATTGGAGTGGGAAGTCCACCTTCTGTGAAGAAGTTACATGAATTTCACCCCTTATTGTTGGGTGTACCAGGGAGTGGGAAATCCACCTTCTATGAAGAAGTTACACATTCTTCCATTCGATCATCAGTTCGTGTTGACCAGTTTAGTTATCTCATTTTTATGTCTTTGGTGAAATATGTTGCCGCGATATGCTGGGGGATAGGAAAGCCGGTGACGGTGGAGGAGATACAAGTCGACCCACCAAAAGCAACAGAAGTTCGAGTTAAGATGCTCTGTGCCAGTTTATGCCACACAGATATCTCAAGCATTCAAGGATTCCCATATATCAATTTCCCTCTAGCACTTGGACACGAAGGAGTTGGTGATAAAGTGATAAATGTTGAAGTAGGAGATACTGTAATTCCAACATACATAGGCGAGTGTCAAGAATGCGAGAACTGTGTTTCAGGAAAAACCAATTTGTGTCAGACATATCCTATAAGATTGACGGGTCTAATGGCAGATAACACTTCAAGGATGTCCATCCGAGGGCAGAGGCTACACCATGTTTTAAGTTGTGCAACAAGGTCAGAGTACATGGTTAGTGATGCCAAGTACACTCTGAAAGTTGATCCAACCATTGATCCAGCCCATGCCAGTTTTATCTCATGTGGCTTTTCAACTGGTTTAGGAGCTGCTTGGAAGGAAGCCAAGGTTGAGAGTGGATCCAGTGTGGCTGTTTTCGGTCTTGGGGCTGTTGGATTAGGGGCTATAAGCGGAGCCAAAATGATGGGAGCAACTAAGATAATTGGAGTTGACAAAAATGAGATGAAGAGACAAAAGGGAGAGGCTTTTGGAATGACCAACTTTATAAATCCTGGTGATTCTGCTAAATCTGTTTCAGAATTGGTCAAGGAACTGAATGGTGGGATGGGTGTGGATTATTCCTTTGAGTGCACTGGAGTTGCTCCTTTACTCACTGAATCTTTGGAAGCCACAAAAGTCGTAAGAACCGAGCCTATTATACCGTTTGGTCTTACTTCCATTATGTACGGTAGAACTTTGAAAGGTTCTGTTTTTGGGGGCCTAAAAGCCATTTCGGACCTCTCCATATTAGCTAACAAATGCCAGAAAAAGGAATTTCCCCTTCAAGAACTATTCACCCACCAAGTCCCATTGGTAGATATAAACAAAGCATTTGAGCTCTTGAAACATCCCAATTGTGTCAAAGTTGTCATCAACATGTAACATTGACAACTTTTTTCCAGAACAATTTTCCTTTCCAACTTGGATTCTGTACTTGCTTTTTCTTCGAACTATTTATTATCCTCGTC 1474 0.4206 MIFQHEFHPLLLGVPGSGKSTFCEEVTRISPLIGVGSPPSVKKLHEFHPLLLGVPGSGKSTFYEEVTHSSIRSSVRVDQFSYLIFMSLVKYVAAICWGIGKPVTVEEIQVDPPKATEVRVKMLCASLCHTDISSIQGFPYINFPLALGHEGVGDKVINVEVGDTVIPTYIGECQECENCVSGKTNLCQTYPIRLTGLMADNTSRMSIRGQRLHHVLSCATRSEYMVSDAKYTLKVDPTIDPAHASFISCGFSTGLGAAWKEAKVESGSSVAVFGLGAVGLGAISGAKMMGATKIIGVDKNEMKRQKGEAFGMTNFINPGDSAKSVSELVKELNGGMGVDYSFECTGVAPLLTESLEATKVVRTEPIIPFGLTSIMYGRTLKGSVFGGLKAISDLSILANKCQKKEFPLQELFTHQVPLVDINKAFELLKHPNCVKVVINM 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00723 440 SUPERFAMILY GroES-like 88 265 IPR011032 -
Pste1g00723 440 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 239 402 IPR036291 -
Pste1g00723 440 Gene3D - 254 383 - -
Pste1g00723 440 PANTHER ALCOHOL DEHYDROGENASE 89 432 - -
Pste1g00723 440 CDD liver_alcohol_DH_like 93 438 - -
Pste1g00723 440 FunFam S-(hydroxymethyl)glutathione dehydrogenase 254 383 - -
Pste1g00723 440 Pfam Zinc-binding dehydrogenase 277 359 IPR013149 -
Pste1g00723 440 Gene3D - 95 435 - -
Pste1g00723 440 FunFam alcohol dehydrogenase 1-like isoform X1 99 253 - -
Pste1g00723 440 Pfam Alcohol dehydrogenase GroES-like domain 116 198 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00723 Pste-Chr1 2271045 2273753 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00723 116 428 Monolignol Biosynthesis Gene Families AT2G21730 24.773 1.05e-08 55.1