Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00686 ATGGATCCTATTACAGGACGCGGGCATTCTCTTCCTCCTCCTTTCCACCTCCAGCACCAGTTTCACTCCTTACAGCAGAGCACAGAAGAGGAGCACAAAAGGGAACGAGAAGAAAACAACAACAACAGCGAAGGAAAAGAAGGAGGCTCAGGGGAAACCGACAATACAAGAAGACCTCGAGGAAGACCCACGGGATCGAAGAACAAGCCGAAACCCCCCATCATCATCACGCGCGACAGCGCCAACGCGCTCAAAACGCACGTCATGGAAGTAGCAGACGGCTGCGACATCGTGGAAAGCGTCTCCACCTTCGCCCGCCGCCGCCAGAGAGGGGTTTGCATAATGAGCGGAACCGGAACCGTGAGCAATGTGACTATACGGCAGCCGGCCTCTTCGGGAGCAGTGATGAGCCTCCAGGGAAGGTTCGAGATGTTGTCCCTGGCGGGATCCTTCCTCCCTCCGCCGGCTCCGGCAGCAGCGTCCGGTTTGACTATATACCTGGCTGGTGGGCAGGGTCAGGTGGTGGGAGGAAGCGTGGTTGGCGCCCTCATTGCTTCGGGGCCTGTTGTTATCATGTCAGCTTCTTTCAGCAACGCTGCGTACGAGAGACTCCCTCTGGAAGACGAGGACCCTGACCCTTCCATGCCTCTTCAGGAACCTTCCATTTGCTCACCGCATGAACACCACCTTCTCGGGGATTCCACCTCCCCTCTCTTCCACGGCTTCAATCCCACCCTTCTTACTTCTCTTCAGATGCCCTCCAATACCTTCTGGCCAACCCCTACCTCTCCTTACTCATGA 801 0.5668 MDPITGRGHSLPPPFHLQHQFHSLQQSTEEEHKREREENNNNSEGKEGGSGETDNTRRPRGRPTGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVESVSTFARRRQRGVCIMSGTGTVSNVTIRQPASSGAVMSLQGRFEMLSLAGSFLPPPAPAAASGLTIYLAGGQGQVVGGSVVGALIASGPVVIMSASFSNAAYERLPLEDEDPDPSMPLQEPSICSPHEHHLLGDSTSPLFHGFNPTLLTSLQMPSNTFWPTPTSPYS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00686 266 Gene3D - 84 211 - -
Pste1g00686 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 28 213 IPR014476 GO:0003680
Pste1g00686 266 Pfam Plants and Prokaryotes Conserved (PCC) domain 85 198 IPR005175 -
Pste1g00686 266 ProSiteProfiles PPC domain profile profile. 81 221 IPR005175 -
Pste1g00686 266 SUPERFAMILY AF0104/ALDC/Ptd012-like 81 210 - -
Pste1g00686 266 FunFam AT-hook motif nuclear-localized protein 84 211 - -
Pste1g00686 266 CDD DUF296 85 152 IPR005175 -
Pste1g00686 266 MobiDBLite consensus disorder prediction 25 43 - -
Pste1g00686 266 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00686 Pste-Chr1 2158389 2159189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00686 1 260 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 52.256 2.31e-73 223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00686 1 2158389 2159189 Pste1g00686 1 2158389 2159189 ECH