Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00684 ATGTTAGAATTTCGGTGGTTCTCTTCCCAATTTCTCTACGATTTGGAGGCTAGGGTTTTGGAATTCTCACGTTTTTATCGAGAACATGGGACACTCCAATGTGTGGAACTCTCATCCCAAGAACTATGGACCTGGTTCTCGCACCTGGTTATTGTGTTGAAGGTTGACCGCGTGTGTGGAAACCCTCATGGATTGATTAGGAAGTATGGCCTTATGTGTTGCAGGCAATGCTTCCGTAGCAATGCCAAGGAAATTGGCTTCATTAAGGTAAATATTTCGATTATCGCTGAAGGATCAGTGGCGACCTGCCACACCCGGTTTGAATTCTTGCATTAGGCTGATGATGATGTGAGGATGATTTTACTGTTTGAAGAATTTTTGTGGTATTTGGCTAAGTTAATTATCAAACTCAGGTTGTGTATGCGAAAATATTTTGGTTTTATATAATTTTTCTGAGCCTCCTACTTTTCTCTCTGAGCCATTTATCATCCTACAATTTTCTATATTTACGTCTGAGTGCTTATCATTTAATTTTAATAACCTTTTTTTTGGCTTACAAACAAAAATGTTTGCATCTTGTGTGGACA 587 0.3884 MLEFRWFSSQFLYDLEARVLEFSRFYREHGTLQCVELSSQELWTWFSHLVIVLKVDRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVNISIIAEGSVATCHTRFEFLH 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00684 111 Pfam Ribosomal protein S14p/S29e 55 89 IPR001209 GO:0003735|GO:0005840|GO:0006412
Pste1g00684 111 PANTHER 40S RIBOSOMAL PROTEIN S29 56 90 IPR039744 GO:0003735|GO:0008270
Pste1g00684 111 FunFam 40S ribosomal protein S29 52 91 - -
Pste1g00684 111 Gene3D 30s Ribosomal Protein S14; Chain N 39 91 IPR043140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00684 Pste-Chr1 2156624 2158503 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00684 57 89 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 93.939 4.63e-17 67.4