Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00678 ATGGCAGCACCACCCACTGACCCAGAAGCGGAAGCCGAAGCGCTGCGCCTCAAGGCCCTGGCGGAGTCTAAGTTCAAAGGCTCGAACAACGTCAAATCCGCTCTCAAATACGCTAAGCGCGCCCAGCGTCTCTGCCCTCGCCTCGCCGGCGTGTCGGAGACCGTCGCCTCCCTCGCCGTCATCGCCGCGCCCGACTGGTACCGCGCCCTCGGCGCCGAGCCCTTCGCCAGCAGCACTGTCATTCGGAGACAGTACAAGAAGCTCGCGCTGCTCCTCCACCCGGACAAGAACCCCTACGTGGCGTCCGAGGAGGCCTTCAAGCTGGTCGGCGAGGCTTTCCACTTTCTCTCCGACAGGAACCGCCGGAGAGTGTACGATGCCGAGCTTCGGCGGAGGATCGAGGCAGAGAGCGAGACGTTCTGGACCGCCTGCTCCACTTGCAGGCTCTTGCACCAGTTTGAGAGAAGGTACTTGGATCAGGAACTGGTGTGTCCGAGTTGTGAGAAGAGTTTCAAGGCTATGGAAGTGGTTCAGAGTGACGGGGATGGGGATGAGGTTGACGGTGGTAGGGTTAGGAGTAGGACGTTGAAGTTGAAAGAGATGGGGAAGAGGGGAATTGGGGTGAAAGGGAAAGATGATGGTGAGAAAGGTGATGGAGTTGGCAATGAGAAGGACGGCAAGTTGAGGAAGAGAATGCGTTCGGTTGGTGAGGTGTTGGAGAGAGCTAAACCTAGTAAGAGGGTTAACACTGGAGAGGAAACGATGACATTGGCTGAATTTCAGAATCAAGTGAAGAAAAAGTTGCAGGCAAAAAAGTTGAAGGAAAAGGAAAAGGAGGATGAAATTGAGAAGAGGAGCAACCGCCGGGAGAGGCGGCAGGGATTGAGGAATAATAGAGGTTTAGAGGTTGGAGAAGTGAGGGATTTGAAGAAGAGGAAGAAGGGGTTGAGAATTGACAAGCATAAGGGTTCTAGTGGAGGGGAATTGGTTGATATGCCAGTGGTGGATTCGGATTTTTATGATTTTGACAAAGATAGAGTGGAAAGAAGCTTTAAGAAAGGTCAAGTGTGGGCGGTGTATGACGACGATGATGGAATGCCGAGGAATTATGCCTTGATTGATGAAACTGTTTCAGTGTATCCGTTTGGAGTGAGAATAAGTTGGCTGGATGTACAGAATAGTGTGGATGGGAGGATAGTTAGGAGACAGAAAATGGGGTTTCATATTCCTTGTGGGAGCTTTAAAGTTGCCAGGAAGGCTTCTGTAAATTCAGTAAATATCTTTTCTCATGTTGTGGATTGTGACAGGGTAGCACGCGAGGTTTACAAAATTTACCCCAAGAAGGGCTCCGTATGGGCGCTTTATAGTGAGGGCAGTATTGATGCAGATGAGGGCAAGCAATGCTATGACATTGTTGTATTTTTGACAGGTCACAGTGAGGTGAGTGGTCTGAGCATGGCATATCTTGAGAAGGTTGATGGTTACAAGACAGTATTTAAGAGACAAGAGAAGGGAAGTGGTGCGATTAAATTTCTTGGGAAGGATGACATGTGGTTAGTTTCTCATCAGATTCCTGCAAGGAAGCTTCTTTCTGATGAAACTCCCGAACTGTTGAAAGACTGTTGGGAACTTGATCCTGCTTCACTTCCATCAGATTTACTTACTATAGGTGCCATAGACGATTGA 1686 0.4988 MAAPPTDPEAEAEALRLKALAESKFKGSNNVKSALKYAKRAQRLCPRLAGVSETVASLAVIAAPDWYRALGAEPFASSTVIRRQYKKLALLLHPDKNPYVASEEAFKLVGEAFHFLSDRNRRRVYDAELRRRIEAESETFWTACSTCRLLHQFERRYLDQELVCPSCEKSFKAMEVVQSDGDGDEVDGGRVRSRTLKLKEMGKRGIGVKGKDDGEKGDGVGNEKDGKLRKRMRSVGEVLERAKPSKRVNTGEETMTLAEFQNQVKKKLQAKKLKEKEKEDEIEKRSNRRERRQGLRNNRGLEVGEVRDLKKRKKGLRIDKHKGSSGGELVDMPVVDSDFYDFDKDRVERSFKKGQVWAVYDDDDGMPRNYALIDETVSVYPFGVRISWLDVQNSVDGRIVRRQKMGFHIPCGSFKVARKASVNSVNIFSHVVDCDRVAREVYKIYPKKGSVWALYSEGSIDADEGKQCYDIVVFLTGHSEVSGLSMAYLEKVDGYKTVFKRQEKGSGAIKFLGKDDMWLVSHQIPARKLLSDETPELLKDCWELDPASLPSDLLTIGAIDD 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00678 561 Coils Coil 257 285 - -
Pste1g00678 561 MobiDBLite consensus disorder prediction 268 299 - -
Pste1g00678 561 CDD DnaJ 65 118 IPR001623 -
Pste1g00678 561 Gene3D DnaJ domain 57 147 IPR036869 -
Pste1g00678 561 Pfam DnaJ domain 65 126 IPR001623 -
Pste1g00678 561 SMART dnaj_3 64 121 IPR001623 -
Pste1g00678 561 MobiDBLite consensus disorder prediction 205 231 - -
Pste1g00678 561 PRINTS DnaJ domain signature 67 85 IPR001623 -
Pste1g00678 561 PRINTS DnaJ domain signature 101 121 IPR001623 -
Pste1g00678 561 PRINTS DnaJ domain signature 85 100 IPR001623 -
Pste1g00678 561 ProSiteProfiles dnaJ domain profile. 65 129 IPR001623 -
Pste1g00678 561 Pfam Domain of unknown function (DUF3444) 332 531 IPR024593 -
Pste1g00678 561 SUPERFAMILY Chaperone J-domain 59 130 IPR036869 -
Pste1g00678 561 PANTHER BNAC03G44070D PROTEIN 11 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00678 Pste-Chr1 2137252 2138937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00678 12 178 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.949 2.61e-22 97.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01891 7 17297365 17301521 Pste1g00678 1 2137252 2138937 PCT