Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00670 ATTGTGAGTAGTGTATGTATCTCTAATGGGTTGATAATAGTTTTGAATCTTAGCAAAATCGAATTAAAACTGCATAGTAACATATTCCCTCACTCACAACCCAACAATGAGTCGCAAGAGAGACAGGTCCTACTTTTCCCGCCACGAAACAGCTAAACGCCGCCGCCCCTTGCCGGAGCCCGCGGAGGAAGAGAGACCCACTTTGAGGCCGGCGCCGCCGTCCGCGGTGGTCGTCATGGGCCTCCCCCAGGACTGCTCCGTGCTCGATCTCAAGTCCCGATTCGAGATCTACGGCGCCATCTCCCGCATCCGCATCGACCGCGACGCCGTCGGATACATCACTTACCGGACTAAGGACTCCGCTGACGCCGCCATCGCCGCCGGACGTGACCCCTCCTTCGAAATCACTGTTAACTCCAAAAAGGTTCAGGTGTTGTGGGCAACTGACACTCTAGCCATGTGGAGAGAAGGAGTTGGTAATAGCAAGGATAAAGGTTCTATGTCAAAGCTTGTGCGTGCTGAGGTACCCTTGAGTAAGCATGGAAGAAGTAATAGACTCGCTTCAACCATAGGGAATACTAAACGTAGTGAAGATAACTCGAGTAGCTCAGTTTTAGAAGTGCCTTTCAAGGGAAGAGAAATTGTTGCTTATGATGATATCCTCTAACCTTGAGAATCTGTATTTTTAGAAACATATCTTTTTCTGTATCAATGATTTGAATTTGGCATTTTAGATCTTTCTAGTTCTTTTTTCCTTTTGTTAAGTATTAAAGTATGTGCTCCACTAGTGAGATACTAGGAAGTAACTTGTGGAATTGGTTGTGATTTTAATTCCTACACCCTAAATGTAATGTATATAATTGGTTTTACCTTG 874 0.4565 MSRKRDRSYFSRHETAKRRRPLPEPAEEERPTLRPAPPSAVVVMGLPQDCSVLDLKSRFEIYGAISRIRIDRDAVGYITYRTKDSADAAIAAGRDPSFEITVNSKKVQVLWATDTLAMWREGVGNSKDKGSMSKLVRAEVPLSKHGRSNRLASTIGNTKRSEDNSSSSVLEVPFKGREIVAYDDIL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00670 186 MobiDBLite consensus disorder prediction 1 38 - -
Pste1g00670 186 SMART rrm1_1 40 110 IPR000504 GO:0003723
Pste1g00670 186 SUPERFAMILY RNA-binding domain, RBD 28 118 IPR035979 GO:0003676
Pste1g00670 186 MobiDBLite consensus disorder prediction 149 168 - -
Pste1g00670 186 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 114 IPR000504 GO:0003723
Pste1g00670 186 PANTHER GEO13361P1-RELATED 24 147 - -
Pste1g00670 186 CDD RRM_SF 41 92 - -
Pste1g00670 186 MobiDBLite consensus disorder prediction 7 31 - -
Pste1g00670 186 Gene3D - 1 116 IPR012677 -
Pste1g00670 186 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 91 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00670 1 186 Homeobox Transcription Factor Family AT1G27050 51.208 2.17e-57 177