Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00668 CTTATTGGACCAACGTTTACTAAGCCTGAACCCTTGTAGCTGAGGAAACTACGCCTCAGAATCGCATCCACTTCGGTTGTGACAGCGATGATGCCCAAAGGTTGATCACATTGTTTCGAGCATGAGAAGACACCGTGAAATTCATCTCTCTCATGCTCTGTGGTGCACCGTTTTTTGTTTGCTCGTGACAGCTTCTGCAGTAACTGAGAAAGAAATTTTGCTTGAATTCAAGGGTAATGTCACGGACGATCCACGCGCCAGCTTGAGTTCCTGGGTTTCAAGTGGAAACCCGTGCCATGATTACGAGGGTGTTACTTGTAACTCTGAAGGGTTTGTGGAGAGAATCGTACTTTGGAACACTAGCTTGGGAGGAGTGTTGTCCTCATCACTTTCGGGCTTGAAGAAGTTGAGGATATTGACCTTGTTTGGGAACCGTTTCTCGGGTGCTATTCCTGAAGGGTATGGTGATCTTCACTCGCTGTGGAAGATCAATTTGAGTTCCAATGCTTTATCTGGTTCGATCCCTGAGTTCATTGGTGATTTGCCTAGCATTCGGTTTCTAGATTTGTCAAAGAATGGCTTCACTGGGGAGATACCTTCGGCTTTGTTTAGGTACTGTTACAAAACCAAGTTCGTTTCTCTTTCTCATAATAACCTTGCTGGTTCAATTCCTGCCTCCTTGGTGAATTGCTCCAACCTTGAAGGGTTTGATTTTTCCTTCAATAACCTTAGTGGGATTGTGCCTTCGCGGCTTTGTGACATTCCGAGGTTGTCATATGTGTCGCTGAGAAGCAATGCCTTGTCAGGGAGCGTGCAGGAGCTCATTTCTTCATGCCAAAGTCTGGAACATTTGGATTTTGGAAGTAATAGGTTCACTAATTTGTTTCCATTCAGCGTCCTTGAAATGCAAAACCTTACCTATCTCAATATATCGTATAATGGGTTTGGAGGGCATATTCCTAACATCAGTGCTTGTAGTGGGAGATTGGAAATCTTTGATGCTTCAGGGAATTCTTTGGATGGGGAGATTCCCGCAGGCATAACCAAATGCAGGAGCCTAAAGCTCTTGGCGTTAGAGTTGAATAGGCTGGTGGGGAATATCCCCATCAATATTCAGGAATTGCGGGGACTAATTGTTATTAAATTGGGTAATAATTCCATTGGTGGAATGATTCCTAAGGGCTTTGGCAGCATTGAACTGCTTGAATTGTTGGATTTTCACAATCTAAACCTCACTGGCCAAATTCCTGATGATATAAGCAATTGCAAGTTTCTTCTTGGACTGGATGTTTCTGGTAATAAATTAGAAGGTGAGATTCCTCAGACTCTTTACAACTTGAGAAACCTGGAATCCCTTAACCTACATGGTAACCAGTTTAATGGAAGCATTCCCCAAAGCCTAGGAAACCTATCAAGGATCCAATACCTAGATCTGTCGCATAATTCACTTTCTGGCTCAATCCCTACTTCCCTTGGAAATTTAAATAACTTGACACATTTTGATCTCTCATTCAATAATCTCTCTGGTGTCATTCCGGATGTTGCAACCATACAGCGATTTGGTGCATCTGCATTTTCTAATAATCCTCTTCTCTGTGGTCCTCCTTTGGACACCCCTTGCTCAGAGAACGGAACTAGATCCCCTTCAGCTCCCAGGAAGGCTAAAGTTCTAAGCACCTCAGCTATTGTTGCAATTGTTGCTGCAGCTGTAATTCTCACTGGGGTTTGTTTGGTGACCATCATGAATATGAGGGCACGCGGCAGAAAAAAAGATGATGATCAGATTATGATTGTTGAGAGCACACCTCTTGGATCAACAGAATCAAATGTTATTATTGGAAAGCTTGTTCTCTTCAGCAAAAGTTTACCATCAAAATATGAAGATTGGGAGGCAGGTACCAAAGCATTACTAGACAAAGAGTCCTTGATAGGTGGTGGATCAATTGGTACAGTCTACCGAACTGATTTTGAAGGTGGCATCTCAATTGCAGTGAAGAAGCTTGAGACTATGGGAAGGATCAGAAACCAGGAGGAATTCGAGCATGAAATTGGGCGACTAGGCAACCTTCAGCACCCTAATTTAGTTGCCTTTCAAGGTTACTATTGGTCATCATCAATGCAGTTGATTCTATCAGAGTTTGTCCCAAATGGCAATCTGTATGATAATCTACATGGGTCTGGTTATCCTGGAACCAGCACCAGTAGAGGCAATAGGGAATTATTTTGGTCTAGAAGGTTCCAAATTGCAGTGGGAACTGCAAGAGCCCTTGCATACCTCCACCATGACTGCAAACCTCCAATTCTTCATCTTAACATTAAATCCTCTAACATACTCCTAGATGACAAGTATGAAGCTAAGTTGTCTGATTACGGTTTAGGAAAATTACTTCCCATTTTGGATAATTATGGTCTGACAAAATTCCACAATGCTGTGGGATATGTTGCACCAGAGTTATCTCAAGGCTTGAGGCAGAGTGAGAAGTGCGATGTTTACAGTTTTGGAGTCATTCTTTTGGAGCTGGTCACTGGGAGGAAGCCTGTGGAAAGTCCAACCACAAATGAGGTGGTGGTTTTGTGTGAATATGTAAGAGGTTTGTTGGAGACTGGCTCAGCCTCAAATTGCTTTGACAGAAATTTACTGGGCTTTGCTGAGAATGAATTGATTCAGGTTATGAGATTGGGGCTAATTTGTACCTCGGAAGATCCTTCAAGGAGACCAAGCATGGCTGAGGTTGTCCAGGTCCTTGAGTCCATTAGAAATGGATTGGAATCCCATTAACCAGAGTAAGAGATTTTCCATGCAGTACTTCTTGAATTGTAGGGGTTTCTTAATTTGTTAAATTCTTCATGGAACTGAGGTATCAAATTTAGGCATTCAAGCATACATGGAAGGAGATTTAGATCGGGATCGATTGTGTATACAAAAGGGCAAGGGACAAGATGGATATTACTTAGGCATTCAAAACGTAAGAAAGACGAAGGACAAAAATTCTTTTGTATTCATTTTTATATTGCCCATTTTTTTCATAAAAACTGTAACATCTGCAAATAAAGGCATTTGTTTATTCCATTACTTCGCGG 3081 0.421 MRRHREIHLSHALWCTVFCLLVTASAVTEKEILLEFKGNVTDDPRASLSSWVSSGNPCHDYEGVTCNSEGFVERIVLWNTSLGGVLSSSLSGLKKLRILTLFGNRFSGAIPEGYGDLHSLWKINLSSNALSGSIPEFIGDLPSIRFLDLSKNGFTGEIPSALFRYCYKTKFVSLSHNNLAGSIPASLVNCSNLEGFDFSFNNLSGIVPSRLCDIPRLSYVSLRSNALSGSVQELISSCQSLEHLDFGSNRFTNLFPFSVLEMQNLTYLNISYNGFGGHIPNISACSGRLEIFDASGNSLDGEIPAGITKCRSLKLLALELNRLVGNIPINIQELRGLIVIKLGNNSIGGMIPKGFGSIELLELLDFHNLNLTGQIPDDISNCKFLLGLDVSGNKLEGEIPQTLYNLRNLESLNLHGNQFNGSIPQSLGNLSRIQYLDLSHNSLSGSIPTSLGNLNNLTHFDLSFNNLSGVIPDVATIQRFGASAFSNNPLLCGPPLDTPCSENGTRSPSAPRKAKVLSTSAIVAIVAAAVILTGVCLVTIMNMRARGRKKDDDQIMIVESTPLGSTESNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKESLIGGGSIGTVYRTDFEGGISIAVKKLETMGRIRNQEEFEHEIGRLGNLQHPNLVAFQGYYWSSSMQLILSEFVPNGNLYDNLHGSGYPGTSTSRGNRELFWSRRFQIAVGTARALAYLHHDCKPPILHLNIKSSNILLDDKYEAKLSDYGLGKLLPILDNYGLTKFHNAVGYVAPELSQGLRQSEKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRGLLETGSASNCFDRNLLGFAENELIQVMRLGLICTSEDPSRRPSMAEVVQVLESIRNGLESH 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00668 885 Pfam Leucine Rich repeat 263 276 IPR001611 GO:0005515
Pste1g00668 885 SMART LRR_typ_2 430 453 IPR003591 -
Pste1g00668 885 SMART LRR_typ_2 406 429 IPR003591 -
Pste1g00668 885 SMART LRR_typ_2 93 117 IPR003591 -
Pste1g00668 885 SMART LRR_typ_2 141 165 IPR003591 -
Pste1g00668 885 SMART LRR_typ_2 454 477 IPR003591 -
Pste1g00668 885 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 26 165 - -
Pste1g00668 885 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 166 503 - -
Pste1g00668 885 PANTHER OS05G0588300 PROTEIN 208 305 - -
Pste1g00668 885 Pfam Protein kinase domain 599 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00668 885 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Pste1g00668 885 SUPERFAMILY Protein kinase-like (PK-like) 598 876 IPR011009 -
Pste1g00668 885 CDD STKc_IRAK 603 878 - -
Pste1g00668 885 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 674 884 - -
Pste1g00668 885 Gene3D Ribonuclease Inhibitor 168 507 IPR032675 -
Pste1g00668 885 ProSiteProfiles Protein kinase domain profile. 597 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00668 885 SUPERFAMILY L domain-like 163 496 - -
Pste1g00668 885 Gene3D Ribonuclease Inhibitor 26 167 IPR032675 -
Pste1g00668 885 Pfam Leucine Rich Repeat 408 430 IPR001611 GO:0005515
Pste1g00668 885 Pfam Leucine Rich Repeat 433 454 IPR001611 GO:0005515
Pste1g00668 885 FunFam Putative LRR receptor-like serine/threonine-protein kinase 574 673 - -
Pste1g00668 885 SUPERFAMILY L domain-like 72 161 - -
Pste1g00668 885 Gene3D Transferase(Phosphotransferase) domain 1 674 884 - -
Pste1g00668 885 Pfam Leucine rich repeat 95 153 IPR001611 GO:0005515
Pste1g00668 885 Gene3D Phosphorylase Kinase; domain 1 567 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00668 Pste-Chr1 2105194 2108350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00668 7 884 Receptor kinase-like Gene Family AT1G62950 63.616 0.0 1104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pste1g00668 Pkinase 4.9e-35 CL0016