Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00667 CAAAATGGGAACCAAAATCTTACTGGACAGCGACACCGTACGACGATCCATGGGTTCCTCTCCATGAACACCCAAAGCCAAACAAAGAAAACATTAACCTTAACCAAACAAACCCTAATTTTTGATCTGCCCCTAATTCTTTGTTCCCTTCTCATCCATTCCTTAATAAATTCTAGATCATATTTTTTGCTATATTTCCCAAATAAATTTCCCCGATTAACCTTCGTGTTACCCACGAAATCTATTTTTCTTCCCATTTTTTTCCCTAAGCATTTGGTTGTCGCTTCTTTCGTTTGTTTTTGTCATCCTCGGCAGATCAGGTCTTATTTTTGCTTCTGCTCCAGCTTTGGAGGATCCACAGTCTCTCTCTGAGTGCGGTGAACAGAACTTGTGCCTTCTTGGTTTGGAGATAACATAACGCAGCATCAGAAGTTGAATTTTTAGCTTGATTGGGAGGGAAAAACTGTAATGTCTTGGTTGATTCCTGTTGGTACAACTGCTGCTGGCACTTAGCAATATAATGATTGTCGCTTTGTAGATAAATTCAACATCGAAGCATGTGATTCAAGTGTTTTGTCTAACGTGCTCAACTTTATAGTGAAGGAATTTGGTTGAAGGTTTTGAAGGAGAATGGTATCTTTTAGGCTGTCTTGTAATCAGTGAGATGGATAAAACCACAAAAGAGAAGGAGTCAAAGACCCCGCCACCTACGTCACAGGAGCAGTCTTCGACCACTAGCACTGGAACAATTAATCCTGACTGGCCTGGCTTTCAGGCATATTCTCCTATACCTCCACATGGTTTCTTGGCATCTAGTCCCCAGGCTCACCCTTATATGTGGGGCGTCCAGCAATTTATGCCTCCTTATGGCACTCCACCGCATCCCTATGTTGCAATGTATCCCCCTGGTGGCATTTATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCAAATGGCATTGCTGAGGCTTCGGGAAACACTCCTGGCAGCATGGAAGCCGATGGTAAGCCTCCTGAGATGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATCACAGGGAAAAATAATGAACATGGTAAAACACCGGGGACATCTGCTAATGGTATTCATTCAAAGAGGAAATCCTGGGTTTGTAGTGGTGAGAGTGCAAGCGAAGGTGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTCAAAATGTACCACTCAATGTAGAAGATGATTGGCTCGAGACAGAGAACAAAGTTATTATCTATCGAGTTCATCTGATTCTGGAGCCTTTCATGCTTAGGTGTCGTGTTGAAGATGTTGAAGGCTCACTTCCACCAAAGAATCTCCGCCGCTTGCATCTCGGCAACAACTTCTTCGTTCAAATCCCCTCGATTACGATTGTTGGCTGCACCTCCAGTGCCTTGCCGTCTTCGGAAACAAACTTGAATGATGAACCATCTCAAAATGGCAGTTCAGCATACACTCCTCAAAATGGGGGACTAAATACACCTCATACAGTGGTCAATCAAACTATGTCTATGATACCTATCTCTGCAGGTGGTGCTCCTGGAGCTGTTCCTGGTCCCACGACAAACTTAAATATAGGAATGGACTATTGGGGTACGCCAGCCGCGTCCAACATTCCTGCACTCGGCAGAAAGGTTCCATCTACTGCAGTTGCTGGAGGGATGGTTACTGCTGGATCACGGGATAGTGTTCAGTCACAACTCTGGCTACAGGATGAAAGAGAGCTTAAAAGGCAAAGGCGGAAGCAGTCTAACAGGGAATCTGCTCGCAGATCCAGGTTGCGCAAGCAGGCCGAGTGTGATGAGTTAGCTCAGCGTGCTGAGGCTTTGAAGGAAGAAAATGCTTCCCTTCGGTCAGAAGTAAGCCGAATCAGGAGTGAGTATGAGCAGCTACTCTCCGAGAATGTTTCTCTCAAGGAGAGACTTGGGGAGCTACCTGCGAACAATGATCATCGTAGGTCTGGCAGGAACGATCAGCATGTGGGTAATGACATTCAACAGAGTGGGCAGACAGAGGTTGTTCAGGGTGGTCATTAGCACTTGTCCAACCACTGCCCCCGCATTTGAGGGAGATAATCTAACTTAATAGCAAGAGCAAGATCTTGTTTTGGATAGCTTGTAGTTCAAATTGTATTAAAGTTGATCATTTATAGTCTTAAGATCTGTTTAATGTTATATGATCCTTTATGCCTAATTTTCCTTTTTAAATTTTTACTCATTCAAGACAGTCTGGACTGTATGTAGTGTGTGAATTGTCATATCTTATCCGCAGTTTCAAAGTTAGTGTTCACATTAAGCAATATAGCTAATGAACCTGAGTGTTGTCCATTATATGATATTTCCTGTACAAATAATAAGTAAAGAGAAAATCAA 2440 0.4324 MDKTTKEKESKTPPPTSQEQSSTTSTGTINPDWPGFQAYSPIPPHGFLASSPQAHPYMWGVQQFMPPYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFSPFAMPSPNGIAEASGNTPGSMEADGKPPEMKEKLPIKRSKGSLGSLNMITGKNNEHGKTPGTSANGIHSKRKSWVCSGESASEGEGTSEGSDANSQNVPLNVEDDWLETENKVIIYRVHLILEPFMLRCRVEDVEGSLPPKNLRRLHLGNNFFVQIPSITIVGCTSSALPSSETNLNDEPSQNGSSAYTPQNGGLNTPHTVVNQTMSMIPISAGGAPGAVPGPTTNLNIGMDYWGTPAASNIPALGRKVPSTAVAGGMVTAGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSEYEQLLSENVSLKERLGELPANNDHRRSGRNDQHVGNDIQQSGQTEVVQGGH 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00667 479 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 381 396 IPR004827 GO:0003700|GO:0006355
Pste1g00667 479 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 376 439 IPR004827 GO:0003700|GO:0006355
Pste1g00667 479 MobiDBLite consensus disorder prediction 148 168 - -
Pste1g00667 479 MobiDBLite consensus disorder prediction 445 460 - -
Pste1g00667 479 SUPERFAMILY Leucine zipper domain 377 433 IPR046347 GO:0003700|GO:0006355
Pste1g00667 479 MobiDBLite consensus disorder prediction 443 479 - -
Pste1g00667 479 Pfam Disordered region downstream of MFMR 130 196 - -
Pste1g00667 479 Pfam Disordered region downstream of MFMR 274 341 - -
Pste1g00667 479 MobiDBLite consensus disorder prediction 14 33 - -
Pste1g00667 479 PANTHER G-BOX-BINDING FACTOR 3-RELATED 271 471 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pste1g00667 479 CDD bZIP_plant_GBF1 379 429 IPR045314 GO:0003700|GO:0006355
Pste1g00667 479 SMART brlzneu 374 438 IPR004827 GO:0003700|GO:0006355
Pste1g00667 479 Pfam G-box binding protein MFMR 3 91 IPR012900 -
Pste1g00667 479 Coils Coil 394 442 - -
Pste1g00667 479 MobiDBLite consensus disorder prediction 1 38 - -
Pste1g00667 479 MobiDBLite consensus disorder prediction 148 196 - -
Pste1g00667 479 MobiDBLite consensus disorder prediction 376 396 - -
Pste1g00667 479 Pfam bZIP transcription factor 374 436 IPR004827 GO:0003700|GO:0006355
Pste1g00667 479 MobiDBLite consensus disorder prediction 267 298 - -
Pste1g00667 479 MobiDBLite consensus disorder prediction 461 479 - -
Pste1g00667 479 Gene3D - 377 432 - -
Pste1g00667 479 MobiDBLite consensus disorder prediction 178 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00667 Pste-Chr1 2104205 2119593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00667 279 458 bZIP Transcription Factor Family AT2G35530 58.065 1.80e-60 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste1g00667 MFMR 2.2e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00667 1 2104205 2119593 Pste1g00667 1 2104205 2119593 ECH
Pste1g00667 1 2104205 2119593 Pste7g00452 7 4333043 4346445 PCT