Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00658 CAAGTTAACATAAACAAGTACTCCATGATCGGAACACAACAGAAGGTGGGATCAATATGCTTTACTTTCTTGTTATTGCTGAGTTTCAGCCCTTTCATTATAAAGGTTCAAGCACAGACTGACCTAGGAAGTAACTGTGAAAACACCACCCAACAGACTCTCAGCAGTGCATACCAAACCAATCTTGATGAAATGTTCAGATGGATGTCCTCTGATGCAGGCACAAGCTTAGGTTATAATCACACCACCATAGGCACCAACAGCTCTGTGTATGGCCTCTATGATTGTGGTGGTGATGTGGTTGGATACTTTTGTCAATATTGTATTTCCAATGCAATTCAAAAAGCCTCTAAGCTCTGCCCCAATAGGGTATCTGCAGTGGTGTGGACTGATTATTGCACCCTAAGGTACTCAAATGAGAGTTTCTTTGGGACATTTCTGACACAACCAACATGGTATACTATTGGAACCAAAAATGTATCCAACAGGGAAGAAATTCAGAAAGGTGAGGATCTTGGTGGCTTCAATTTAAGTGCCACTGAGAGTAGGTATGGTGTAGTGCAATGCACTAGAGATCTCACAAATGAAGGCTGCAGTCAATGTTTGGAGACCATATTTACGGAAGTTCCCAAATGTTGTGAAGAAAAATTAGGATGGATGGTTTGGTCAGGAAGTTGTTTGATCAAGTATGACGATTATATGTTCTACCTTCTTCCCAACCAAACACCTTCAGCTCCTGTGCCTAATCCTCAAACAGATAATCAAGGTGGAAATAAGAGGTCAAAAATCTTGATCATTAGCTTCAGTGTGCTCGGGGCAATAATTATACTATGTTTCAGCATATATTGCTTCTGGTACAGGATTAGAGTTAGAAAAGGCAATTATCAAGAAGAAACGAGGAATAGAGTCACAGAGGATGGGCTTCCTTTATCCTCATATAATAAAATTCAAATTGAGGAAACATGGGACACAGACCTGCCTATAGTCCCATTAATAGCAATTCTACAGAGTACTGATCACTTTTCAGAAGCATCTAAATTAGGGGAAGGTGGATTTGGCCCCGTTTACAAGGGAATTCTACCAGATGGAAGACCTATAGCAGTCAAAAGACTTTCAAAATTTTCTGGTCAAGGTTCAGAGGAGTTCAATAATGAAGTAATGTTTATAGCTAAACTGCGGCATCGCAACCTTGTAAGGCTTTTGGCATGTTGCTTAGAGGAAAATGAAAAAATACTTGTATACGAGTATTTGCCGAATAAAAGTCTCAACATTCACCTGTTTGATGCTGAGAAAAGAAAGCAACTCGATTGGAAAGTAAGATTAAACATTATAAATGGAATAGCAAGAGGTATTTTATACCTTCATGAGGACTCTCAACTGAAAGTAATTCATAGAGATCTCAAGGCTAGTAATGTTCTATTAGATCATGAGATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAAATAGGACAAAATCAAGCAAATACAAAACGAATAATGGGAACTTATGGATACATGGCTCCTGAGTATGCTATGGAGGGACTATTTTCAGTTAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTGTGGAAGAAAGAATGGTGGATTCTACCAGTTAGAACATGGTCAAACTCTTCTTTTCTATGCTTGGAGAATATGGAGTGCAGGAAATTGTTTGGAATTGATGGATCCAGTGCTGGAAAAATCCTTCATAGCTAGTGAAGTTGAGAGATGCATACACATTGGTTTACTGTGCGTTCAAGAAGATCCAACAGATAGACCAACCATGTCCAATGTTGTTTTAATGTTGGCAAGTGACATAATGGCCCTGCCGAATCCCAAGCACCCAGCATTTTCAGTTGGGAGAGTGGCCTCAGGTGAAGTCTCTACATCAAAAAGTTCCAAGAATATTTCCATTAATGATGTAACGGATGATGATGAGACTCCTGAGCCCAATGTAAATCCTAATGATCAAGGTCCATTGGGACAACAGCAAAATGAAAGACCTAGGACAGAGATTGGGGTACATGAGACTATTATGCAGTACAGTAAGAAATTGCATTCAAGAAAGGTTAGAAAGGAAACACCTGAATGGAATTGGAGTGGACCCCAAGGGAGA 2145 0.3939 QVNINKYSMIGTQQKVGSICFTFLLLLSFSPFIIKVQAQTDLGSNCENTTQQTLSSAYQTNLDEMFRWMSSDAGTSLGYNHTTIGTNSSVYGLYDCGGDVVGYFCQYCISNAIQKASKLCPNRVSAVVWTDYCTLRYSNESFFGTFLTQPTWYTIGTKNVSNREEIQKGEDLGGFNLSATESRYGVVQCTRDLTNEGCSQCLETIFTEVPKCCEEKLGWMVWSGSCLIKYDDYMFYLLPNQTPSAPVPNPQTDNQGGNKRSKILIISFSVLGAIIILCFSIYCFWYRIRVRKGNYQEETRNRVTEDGLPLSSYNKIQIEETWDTDLPIVPLIAILQSTDHFSEASKLGEGGFGPVYKGILPDGRPIAVKRLSKFSGQGSEEFNNEVMFIAKLRHRNLVRLLACCLEENEKILVYEYLPNKSLNIHLFDAEKRKQLDWKVRLNIINGIARGILYLHEDSQLKVIHRDLKASNVLLDHEMNPKISDFGLARAFEIGQNQANTKRIMGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGRKNGGFYQLEHGQTLLFYAWRIWSAGNCLELMDPVLEKSFIASEVERCIHIGLLCVQEDPTDRPTMSNVVLMLASDIMALPNPKHPAFSVGRVASGEVSTSKSSKNISINDVTDDDETPEPNVNPNDQGPLGQQQNERPRTEIGVHETIMQYSKKLHSRKVRKETPEWNWSGPQGR 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00658 715 MobiDBLite consensus disorder prediction 638 715 - -
Pste1g00658 715 ProSiteProfiles Gnk2-homologous domain profile. 40 142 IPR002902 -
Pste1g00658 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Pste1g00658 715 FunFam Cysteine-rich receptor-like protein kinase 10 303 416 - -
Pste1g00658 715 MobiDBLite consensus disorder prediction 661 678 - -
Pste1g00658 715 FunFam Liguleless narrow1 417 620 - -
Pste1g00658 715 SMART serkin_6 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00658 715 Pfam Protein tyrosine and serine/threonine kinase 345 610 IPR001245 GO:0004672|GO:0006468
Pste1g00658 715 Gene3D - 156 235 IPR038408 -
Pste1g00658 715 Gene3D - 39 142 IPR038408 -
Pste1g00658 715 ProSiteProfiles Protein kinase domain profile. 341 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00658 715 Pfam Salt stress response/antifungal 46 139 IPR002902 -
Pste1g00658 715 Pfam Salt stress response/antifungal 180 233 IPR002902 -
Pste1g00658 715 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 115 652 - -
Pste1g00658 715 CDD STKc_IRAK 347 612 - -
Pste1g00658 715 SUPERFAMILY Protein kinase-like (PK-like) 325 631 IPR011009 -
Pste1g00658 715 Gene3D Phosphorylase Kinase; domain 1 309 416 - -
Pste1g00658 715 Pfam Domain of unknown function (DUF3403) 614 652 IPR021820 GO:0004674
Pste1g00658 715 Gene3D Transferase(Phosphotransferase) domain 1 417 619 - -
Pste1g00658 715 FunFam Cysteine-rich receptor-like protein kinase 28 42 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00658 Pste-Chr1 2076779 2080585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00658 18 650 Receptor kinase-like Gene Family AT4G05200 41.202 3.67e-164 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00658 PK_Tyr_Ser-Thr 5.7e-46 CL0016