Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00638 AAAAAATTTTGAAAAAAGGCATAAATTGCAAGACCTAACTACAGTTTTACTACAGTTTTAGGTGACCGACAAGCTTCCTTACAAGCACTTGTCATTCACACAGTATTTAAAATCTTAAACGACAATTAAATCACAATTCTGAACGGCTGTTTTGATAAATATTTTAAAAAAAAATCCATTTAATTAAATATTTTCAAAATATCCAATTTAATCGATCACACCTTTAAAATTGTACTTGAAATATATACATACATAAAAGGACACATTGCATTGCATTATTCCTTCTCCTCCATGGCCTCGATTAATGAAGCATATTTGCTTGCTTTGACAATGATGTTGATGCTGATGGAAGAACGAGCTTTGGCTGGAATATTTCGACCCAATCCATGGGCTGTTGCCCATGCTACCTTTTACGGTGATGAGACTGGTTCAGCCACCATGGGAGGAACATGCGGTTATGGAAATTTATTTCAAAATGGTTATGGGACAGATACAGTGACTTTAAGCTCGAGCTTGTTCAACAACTGTGGAACCTGCTATCAAATAAAATGTTACAAATCAAGTGCATGTTATAAGAACATGGCTTTCTGACTGCCACCAATTTGTGTCCCCCCTAATTGGGCTCATCCGTCAA 634 0.3596 MASINEAYLLALTMMLMLMEERALAGIFRPNPWAVAHATFYGDETGSATMGGTCGYGNLFQNGYGTDTVTLSSSLFNNCGTCYQIKCYKSSACYKNMAF 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00638 99 PRINTS Expansin/Lol pI family signature 32 47 IPR007118 GO:0005576
Pste1g00638 99 PRINTS Expansin/Lol pI family signature 50 68 IPR007118 GO:0005576
Pste1g00638 99 PRINTS Expansin/Lol pI family signature 72 90 IPR007118 GO:0005576
Pste1g00638 99 SUPERFAMILY Barwin-like endoglucanases 23 96 IPR036908 -
Pste1g00638 99 Gene3D - 22 98 IPR036908 -
Pste1g00638 99 PANTHER EXPANSIN-A15 11 96 IPR002963 GO:0009664
Pste1g00638 99 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 51 99 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00638 Pste-Chr1 2042124 2042838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00638 9 94 Expansin Gene Family AT1G12560 52.809 1.27e-29 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00638 1 2042124 2042838 Pste1g00638 1 2042124 2042838 ECH
Pste6g01674 6 7376772 7378270 Pste1g00638 1 2042124 2042838 PCT