Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00629 TCAGAGCAAATAACAAATCAAGAAAGTCCAGAGTAATCCATGGTAGGAATGCAACTAAATGTGAGATCAATATCCTTCACTTTCTTCTTGTTACTGAGTTTCAGAAAACTCATTTCAAAGGCACAACAAGCACCCACTTACCAAGGTAGTAACTGCCAAAACTCCAACAACCTCTCAGCAATGAATACCAAAGTAATCTTGAGAGGATTTTCAAATGGGTGTCTTCTGATGCAGCCACAAGCAAAGGTTACAACCACACCACCATAGGCATGAACAACCCTGTGTATGGTCTCTATGATTGCCGTGGTGATGTGGTTGGTTACTTTTGTCAATTTTGTGTTTCCGCTGCTGCAAGAGAGGCTCCTTTGCGCTGCCCCAGTAGCGTATCTGCTATGGTCTGGTATGATTACTGCATTTTAAGGTACTCAAATGAGAGCTTCTTTGGGGAAGTTTTGACATACCCAATTTGGTATACTCTTGGAACCAAAAGCATATCAAACAAGGCAGAGATTCAGAAAGATGAGGCTTTTGTGAGAAGTTTGATCAGAAAAGCAACTGTTGAGACCAACCAGTTGTACTATATGGATGCCTTCAATTTGAGTTCCACTCAAACAAGGTATGGCTTGGTACAATGTACTAGAGATCTCACCAATGAGAGGTGTAGACAGTGTTTGGATGCCCTTTTAGATCAATTTCCCAAATTCCGTGGCCAAAAGCTAAGATGGTTTATTTGGTCTGGAAGTTGTATGATAGTGTTTGATGATCAAATGTTCTACCTTCTTAACAACCATACATCTTCAGTTTCTGAGTCTAATCAGCAAGCAGCTAAATATGGGGGTAATAAGAGGTCAAAAATCTTGATCATTAGCTTCAGTGTGATGGGGTCAATAATTCTACTATGTTTCAGTGTATGCTGTTACTGGTACAGGAGGAGAGTTATTAAAAAGGGGCTTCGTCTAACTTTATTTCATAAAAGTCAAACTGAGGAAACATGCAACACAGACCTGCCTAAGATCTCATTAATCAAAATTCTGCAGAGTACAGATAACTTTTCAGATGAATCTAAGTTAGGAGAAGGAGGATTTGGCTGTGTTTACAAGGGAATTCTATCAGATGGAAGAGAAATTGCAGTCAAAAGGCTCTCAAATTTTTCCAGTCAAGGTTCAGAGGAGTTCAACAATGAGATAATGCTTATAGCTAAATTGCAACATAGAAACCTTGTGAGACTTTTGGCATGTTGCATGGAGGAAAATGAAAAGATTCTTGTGTATGAGTATTTGCCAAATAAAAGTCTCGACTTTCACCTGTTTGTGAAATATGATGTTTATAGTTTTGGAGTTCTTATGCTAGAAATCATTTGTGGGAGAAAGAATAGTAGATTCCATGTGTCAGAACATGATCAAACTCTTCTTTTATATGTGAGCTTGGACAATATGGTGTGCCGGACAATATGGTGTGCCGGAATAGCAGAAAGGATTTGTACATTCTACTCCACAGTGACGAAGTAAAGTTGTGCTCATCATTGATTTCAAGTAGATTATTTGTTGCATT 1551 0.3868 MNNPVYGLYDCRGDVVGYFCQFCVSAAAREAPLRCPSSVSAMVWYDYCILRYSNESFFGEVLTYPIWYTLGTKSISNKAEIQKDEAFVRSLIRKATVETNQLYYMDAFNLSSTQTRYGLVQCTRDLTNERCRQCLDALLDQFPKFRGQKLRWFIWSGSCMIVFDDQMFYLLNNHTSSVSESNQQAAKYGGNKRSKILIISFSVMGSIILLCFSVCCYWYRRRVIKKGLRLTLFHKSQTEETCNTDLPKISLIKILQSTDNFSDESKLGEGGFGCVYKGILSDGREIAVKRLSNFSSQGSEEFNNEIMLIAKLQHRNLVRLLACCMEENEKILVYEYLPNKSLDFHLFVKYDVYSFGVLMLEIICGRKNSRFHVSEHDQTLLLYVSLDNMVCRTIWCAGIAERICTFYSTVTK 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00629 412 ProSiteProfiles Gnk2-homologous domain profile. 1 57 IPR002902 -
Pste1g00629 412 Pfam Protein kinase domain 262 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00629 412 ProSitePatterns Protein kinases ATP-binding region signature. 267 289 IPR017441 GO:0005524
Pste1g00629 412 Pfam Salt stress response/antifungal 88 165 IPR002902 -
Pste1g00629 412 Pfam Salt stress response/antifungal 4 54 IPR002902 -
Pste1g00629 412 Gene3D Phosphorylase Kinase; domain 1 225 336 - -
Pste1g00629 412 SUPERFAMILY Protein kinase-like (PK-like) 247 372 IPR011009 -
Pste1g00629 412 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 226 336 - -
Pste1g00629 412 ProSiteProfiles Gnk2-homologous domain profile. 63 168 IPR002902 -
Pste1g00629 412 ProSiteProfiles Protein kinase domain profile. 261 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00629 412 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 349 383 - -
Pste1g00629 412 Gene3D - 66 168 IPR038408 -
Pste1g00629 412 Gene3D - 1 57 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00629 Pste-Chr1 2029467 2032189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00629 2 347 Receptor kinase-like Gene Family AT4G05200 35.097 1.64e-63 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00629 Pkinase 2.1e-14 CL0016