Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00609 AAAATATCAAAAGCCAATAAACTGAAAGTACGCGTCAAGTGCTGTTTCAGTGTTTATCTCCACTTAAATCTCTTCTAAAGCGTGATTTTCGCTATTATGTACCTACCCTTTTGAAGCCACTTACACAAAGTCATTGACAAAAGGATAAAAAGTCTCCTCCTCTCATAAAGCACTGATTTTTACGGAGAACATTGCTTTTGTTCGTGTTGTGCTGATATGGGTGCTGGTGACTACTACAAGATACTTAACGTGAAGCGTGATGCCAGTGATGAGGAGGTGAAGAAGGCTTACAAGAGGTTGGCTATGAAATGGCACCCAGATAAGAACCTTGAGGACCCTCTGAGGAAGGAAGAGTTTGAGGCCAAGTTCAAGCAGGTTTGTGAGGCCTATGATGTGCTCAGTGACCCCAAGAAGCGCCGGATCTATGACTTGTACGGTCACTATCCCCTTAACTCTCAGCGTTTCACCAAAGAACGTGGTGATGCCAAGATGAAGGATGCAGGGGTGGTTGAAAGCAGCTTGCTTTGTTCCCTTGAAGACCTTTTCACCGGTTGCAAAAAGAAGTTGAAGGTCTCTAGGACTGTTCCTAATGAGTTCGGAGAGTCAGTGTGTGTGGAAGAAATCTTGAAGATAGACATTAAACCTGGTTGGAAGAAGGGCACAAAAATCACTTTTCCTGGGAAGGGAAACCATGAACCAGGATGTGCTCCAGCTGATCTAATTTTTGTGTTGGATGAGAGACCTCATGCTATTTTCAAGAGAGAAGGAAATGATCTTGTAATGACTCAGAAGATATTACTTGTAGATGCTCTCACAGGAAAGACTCTCAACTTGACCACCTTGGATGGAAGATATCTCACAATCCAATTGACTGATATTGTGAAATCAGGCTATGAGCTTGTGGTCCCAAATGAAGGCATGCCCATCTCAAAGGAACCTAGCAAGAAAGGGAATCTTAGAATCAAGTTTGATATAATATTTCCTTCAACGCTGACCACACAACAGAAATGTGATCTAAGAAGGATTTTGAGTGATGTTGATTACTGAACCCGTATTTTTAAGTCTAATGGCTGCAACTCTCCATTAACTCTCTTTCAGTTGGAGATTAGTTTACACTGTAAATAACTATGTAGTTTTACTAATCTATATGTCATTTGTACATATCACAAATATATCAAGCGTAGTTGCTACTTGCTACCATATATGCAGTACGATAGCTTTAAAAACAAATGTATATCAATATTTTTGCAGTTTGATATTTTTACTCTGCACTTCTAGAATATAGAAAAAAAGAAAATGG 1300 0.3985 MGAGDYYKILNVKRDASDEEVKKAYKRLAMKWHPDKNLEDPLRKEEFEAKFKQVCEAYDVLSDPKKRRIYDLYGHYPLNSQRFTKERGDAKMKDAGVVESSLLCSLEDLFTGCKKKLKVSRTVPNEFGESVCVEEILKIDIKPGWKKGTKITFPGKGNHEPGCAPADLIFVLDERPHAIFKREGNDLVMTQKILLVDALTGKTLNLTTLDGRYLTIQLTDIVKSGYELVVPNEGMPISKEPSKKGNLRIKFDIIFPSTLTTQQKCDLRRILSDVDY 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00609 276 Pfam DnaJ domain 5 71 IPR001623 -
Pste1g00609 276 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 271 - -
Pste1g00609 276 CDD DnaJ 5 63 IPR001623 -
Pste1g00609 276 SUPERFAMILY Chaperone J-domain 4 85 IPR036869 -
Pste1g00609 276 SUPERFAMILY HSP40/DnaJ peptide-binding domain 101 177 IPR008971 GO:0006457|GO:0051082
Pste1g00609 276 FunFam DNAJ heat shock family protein 176 271 - -
Pste1g00609 276 CDD DnaJ_C 98 259 - -
Pste1g00609 276 PRINTS DnaJ domain signature 66 85 IPR001623 -
Pste1g00609 276 PRINTS DnaJ domain signature 7 25 IPR001623 -
Pste1g00609 276 PRINTS DnaJ domain signature 25 40 IPR001623 -
Pste1g00609 276 PRINTS DnaJ domain signature 46 66 IPR001623 -
Pste1g00609 276 SMART dnaj_3 4 66 IPR001623 -
Pste1g00609 276 SUPERFAMILY HSP40/DnaJ peptide-binding domain 180 264 IPR008971 GO:0006457|GO:0051082
Pste1g00609 276 ProSiteProfiles dnaJ domain profile. 5 74 IPR001623 -
Pste1g00609 276 FunFam Dnaj homolog subfamily b member 93 175 - -
Pste1g00609 276 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Pste1g00609 276 Pfam DnaJ C terminal domain 99 256 IPR002939 -
Pste1g00609 276 Gene3D - 177 257 - -
Pste1g00609 276 Gene3D - 97 175 - -
Pste1g00609 276 Gene3D DnaJ domain 2 96 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00609 Pste-Chr1 1979779 1982005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00609 6 73 C2H2 Transcription Factor Family AT1G74250 39.130 7.27e-11 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00609 1 1979779 1982005 Pste1g00609 1 1979779 1982005 ECH
Pste7g00837 7 7775546 7778046 Pste1g00609 1 1979779 1982005 PCT