Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00597 CAAGACCAGGGAACTCCATGGTGGGAATACAACTAAACGTGAAATCAATATGCTTTGGTTTCTTTCTATTCCTTAGTTTCAGACCACTCGTTACAAAGGCACAAACGCCCATTTTCGTGGGAAATGACTGCCAAAACACAACTCAAACCCCTCTTAGCAGTGCATACCAAACCAACCTTAACAGAGTCCTCAAATGGATATCCTCTGATGCAGCTAAAAGCAAAAGTTATAACTACACTACCATAGGCAACAATAGTGTCTCAAAAAGCAACTGTGGAGACCAACCAGTTATACTACATGGATGGCTTCAATTTGAGTTCCACTTAGAGAAGATATCTTTCGTCATTATATTGTCAGATGATGAAAAGAGAAAGCAACTTGTAATTCATAGAGATCCCAAAGCTAGCAATATTCTATTAGATGAAGGCATGAATCCCAAAATATCATATTTTGGAATGGTAAGAACATTTGAAAAGGGCCAGAACAAGGAAAATACAAAACATGAAATCAGATGTTTTCAGTTGTGTAGCTGTTGTTCTAGAAATCATTTGTGGGAAAAAAGAACAGTAGATTCTATCTATCAGAATGTGAATTCAACAATACTAAATATAAAGCTAGTCAATATTCATAAATCACAATTAATTGCGGCGTGGAAAATATGGTGGGCAGGAAAATGCTCAGAATTGATGGACCCTGTTCTGGAAAAATCTTGCATAGACAGTGAAGTTATGAAGTGCATACACATTGGTTTGTTGTGTGTTCCAAAAGATGCAGCAGATAGACCAACCATGTCTATATTGTTAATGGAATTAGGTGATGCATGTACGTCAAAAAGTTCCAAGAAACTTTCAATTAAT 857 0.3652 MVGIQLNVKSICFGFFLFLSFRPLVTKAQTPIFVGNDCQNTTQTPLSSAYQTNLNRVLKWISSDAAKSKSYNYTTIGNNSVSKSNCGDQPVILHGWLQFEFHLEKISFVIILSDDEKRKQLVIHRDPKASNILLDEGMNPKISYFGMVRTFEKGQNKENTKHEIRCFQLCSCCSRNHLWEKRTVDSIYQNVNSTILNIKLVNIHKSQLIAAWKIWWAGKCSELMDPVLEKSCIDSEVMKCIHIGLLCVPKDAADRPTMSILLMELGDACTSKSSKKLSIN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00597 280 Gene3D Transferase(Phosphotransferase) domain 1 173 279 - -
Pste1g00597 280 Gene3D Transferase(Phosphotransferase) domain 1 112 172 - -
Pste1g00597 280 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 121 264 - -
Pste1g00597 280 Pfam Protein tyrosine and serine/threonine kinase 120 163 IPR001245 GO:0004672|GO:0006468
Pste1g00597 280 SUPERFAMILY Protein kinase-like (PK-like) 122 263 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00597 Pste-Chr1 1951932 1953454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00597 111 271 Receptor kinase-like Gene Family AT4G11530 39.535 1.40e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00597 PK_Tyr_Ser-Thr 3.6e-05 CL0016