Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00595 ATGGCTACGTCTTCTGTGACAGTGAGTTACCGGTTTCATGAATCCGTTACACGCAATGCACTTAGGTCGTATCTGTCGGAGTTTATCTCGACGTTCTTCTATGTGTTTCTGGTCGTTGGCGCTGGAATGTCCTCACGGAAGTTGATGGCTGATGCATCAGTGAACCCAACAAGTCTGATTGTGGTGGCCGTAGCAAGTGCTTTCGCTTTGTCATCTGTTCTGTACATCGCATGGGACATCTCTGGGGGACACGTCAATCCGGCAGTTACCTTTGCAATGGCTGTGGGCGGCCACATTTCTGTCCCAACCGCTCTCTTTTACTGGCTTTCCCAACTTATAGCCTCTGTTATGGCTTGCCTTGTTCTAAGGGTCTTTGTGGTTGGAATGCATGTTCCATCATACAGCATTGCACAAGAGATGACCGGGTTTGGGGCATCAGTGTTAGAGGGTATTCTCACATTTGTTTTGGTATCCACAGTCTATGCAGCCAGGGACCCTAGGCGCGGTCTAATGAGTTCCATTGGTGTACTTGTAGTTGGTTTGGTGGCTGGGGCAAGTGTCTTGGCCGCAGCTCCATTCTCTGGCGGCTCAATCAACCCTGCATGTGCTTTTGGCTCCGCTGCCATTTCAGGCAGTTTCAGCAACCAAGCAGTTTATTGGGTTGGACCCTTGATTGGTGCTTCTATTTCTGGCCTTCTTTATGACTATGTCCTTTTCCCTTCTCTCCCCATTTCTCAAGGAATTGGACTCTAA 753 0.4914 MATSSVTVSYRFHESVTRNALRSYLSEFISTFFYVFLVVGAGMSSRKLMADASVNPTSLIVVAVASAFALSSVLYIAWDISGGHVNPAVTFAMAVGGHISVPTALFYWLSQLIASVMACLVLRVFVVGMHVPSYSIAQEMTGFGASVLEGILTFVLVSTVYAARDPRRGLMSSIGVLVVGLVAGASVLAAAPFSGGSINPACAFGSAAISGSFSNQAVYWVGPLIGASISGLLYDYVLFPSLPISQGIGL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00595 250 Gene3D Glycerol uptake facilitator protein. 5 242 IPR023271 -
Pste1g00595 250 PANTHER AQUAPORIN-8 12 239 IPR034294 -
Pste1g00595 250 FunFam Probable aquaporin TIP5-1 6 245 - -
Pste1g00595 250 SUPERFAMILY Aquaporin-like 12 243 IPR023271 -
Pste1g00595 250 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste1g00595 250 PRINTS Major intrinsic protein family signature 66 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste1g00595 250 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste1g00595 250 PRINTS Major intrinsic protein family signature 22 41 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste1g00595 250 PRINTS Major intrinsic protein family signature 103 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste1g00595 250 PRINTS Major intrinsic protein family signature 148 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste1g00595 250 Pfam Major intrinsic protein 17 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste1g00595 250 ProSitePatterns MIP family signature. 84 92 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00595 Pste-Chr1 1944561 1945469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00595 9 240 Major Intrinsic Protein MIP AT3G47440 65.517 7.41e-106 305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00595 1 1944561 1945469 Pste1g00595 1 1944561 1945469 ECH