Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00578 AGGCTTTCTGTCGATGCTCGGTGTTGGTGCTACGAAAGCTCAACCGGGGAGGAGGGTACCTTTGTTAAATGCTCTCTCTCTTCACTCTCTGCTCTCCCTTTCTCCCTTTCATGTCTTCAATCACCGCCTCTCCTTCAGGATGTTTCTTTTTGGATCATTTACTGAAGATGAAACCCGATCATTGCTATCAAAGCAGTCTTCTGGGAAAAAGGAAAATCCTGTGGAGAAGAATCAGCTACAATTTGGTTCTCTGAGTTCTGTTACTGTTGAGTCAAACAACCTGCTAAATTCGTCAAAAGCATCAGATTGTGCTCCACCCTCTGATTCTCTGAAATGTAATGGAGTGAAAATTGTCAGTGATAATTCACCTGAAGTGTCAGGAGCAATTAAAGAGAATGGCAGCATTACTAATATCTCCCCCAGCCTCACTAGTACCTTAAGTGTAAATGAAGTTGAAGAAAAAAATGCAAATTCTTTTACATTATTTGGCGAAGATGGACCCTCAAACAAGTTTACAAATTTGAGCTTAGATGCTTCTGAGGCTGAAATCTTGAAGAATGTAGATAAAACTCGCTGTGGGGATAATTCTACATCAAAGTTATCTGATCGAGAGCCCCAACAGGCACTTAATGGACATGTTGTCATGCATGTTAAGGATATACTGCCTCGAGGCCTTGTCAACTCTGGGAATCTATGCTTTCTTAATGCAACCGTGCAGGCCCTCTTGTCATGCTCACCTTTTGTTCATCTTTTACAGCAATTAAGAACTCGCAACCTTCCTAAGGTTGGATATCCCACTTTGACGGCATTTGCTGAATTCATAACCCAATTTGATATGCCAAGCACAACTAGATTAAAGAACCAAGATACAGACATGTTTGAGTCTGGAAGGCCATTTTGCCCTGTTATGTTTGAAGGTGTTCTAAAAAATTTTACTCCTGATGTACCAAATAGCATTTCAGGAAGACCAAGACAGGAAGATGCTCAGGAATTTCTGAGCTTTGTAATGGATCAAATGCATGATGAATTACTGAAGCTTGAAGGACAGTCTTCAAGTCTTGATGGTGGGAAATCTTCTCTGGTTTCTTCTGTGGAAGATGATGAATGGGAAACAGTGGGCCCAAAGAATAAATCTGCTGTAACAAGGACTCAAAGTTTTGTCCCATCAGATCTAAGTGGTATTTTTGGAGGACAACTTAGAAGTTTGGTGAGAGCTAAAGGAAATAGAGCTTCTGCCACTGTTCAACCATATCTCTTGCTCCATCTTGATATCTATCCTGATGCCGCTGGTGTTGTGACTGCAAGAAAATCTGTACAAATAGTGACACTTCCTAAAATAATGATATTGCACCTGATGCGTTTTGGATACGGAAGCCAGGGAAGCACCAAGTTGCATAAGCCCGTGCACTTTCCTCTTGAGTTGGTATTGGGTCGTGACTTGCTTGTTTCTCCATCTACTGAGGGTCGAAAGTACGAACTTGTTGCTACAATTACTCACCATGGAAGGGAGCCTTCAAAGGGACACTACACAGCTGATGCCCAATACCCCAATGGTCGGTGGCTACGATTTGATGATGCATCTGTCTTTGCTATTGGAACAAACAAGGTTCTGCATGATCAGGCATATGTCCTTTTCTACAGACAGATGTGAACATATACATATTGTTCCGTCGAATATCTACTCCCTTCTGCAGCCAACAGAAAAACACTATTCCTATAAAAAAGGATTGCTGGTCGATTAATGTCTTGCATGGAGAAAATGTTGGTGGTTATTTATTAGCTGGTCAAGCTCAATATGCATTGGTCAGGGCACTAAGGTGTCATAAATGGTCGATCTAATCCAGTGTCAAAAGAGGAATTGTTGTAACATTCTTTTTCATGTTAATCTTAAATTGGAAAAGTTTTGTAGTCCTAGCGTAGAACATGGATATGTATTTTTATGGTAACAGTGAGTAAAGGTTTATAAGAATATGCTGGATATTATTAAGGCCCTCTGACTTGGAAGAGATTGGATTATAAATTTATTAAGTGGGTTAAACGTTG 2043 0.4053 MLGVGATKAQPGRRVPLLNALSLHSLLSLSPFHVFNHRLSFRMFLFGSFTEDETRSLLSKQSSGKKENPVEKNQLQFGSLSSVTVESNNLLNSSKASDCAPPSDSLKCNGVKIVSDNSPEVSGAIKENGSITNISPSLTSTLSVNEVEEKNANSFTLFGEDGPSNKFTNLSLDASEAEILKNVDKTRCGDNSTSKLSDREPQQALNGHVVMHVKDILPRGLVNSGNLCFLNATVQALLSCSPFVHLLQQLRTRNLPKVGYPTLTAFAEFITQFDMPSTTRLKNQDTDMFESGRPFCPVMFEGVLKNFTPDVPNSISGRPRQEDAQEFLSFVMDQMHDELLKLEGQSSSLDGGKSSLVSSVEDDEWETVGPKNKSAVTRTQSFVPSDLSGIFGGQLRSLVRAKGNRASATVQPYLLLHLDIYPDAAGVVTARKSVQIVTLPKIMILHLMRFGYGSQGSTKLHKPVHFPLELVLGRDLLVSPSTEGRKYELVATITHHGREPSKGHYTADAQYPNGRWLRFDDASVFAIGTNKVLHDQAYVLFYRQM 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00578 545 Gene3D Cysteine proteinases 206 544 - -
Pste1g00578 545 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 69 545 - -
Pste1g00578 545 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 219 545 IPR028889 -
Pste1g00578 545 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 220 235 IPR018200 GO:0004843|GO:0006511
Pste1g00578 545 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 487 505 IPR018200 GO:0004843|GO:0006511
Pste1g00578 545 Pfam Ubiquitin carboxyl-terminal hydrolase 220 542 IPR001394 GO:0004843|GO:0016579
Pste1g00578 545 SUPERFAMILY Cysteine proteinases 218 544 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00578 Pste-Chr1 1869941 1876318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00578 216 545 Miscellaneous Gene Families AT2G24640 27.473 1.08e-18 87.4