Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00575 TAAAAGTCATATCCTCTCCACAAGAGGTTGAGTGATAAGAATAGGATTTTCTGCTTCTGAAGAGGAAATAGTCTTGGTATCAGTGCATATTCGCTGATGAAATCCAGCCAAAGTTCCACATTCTTGGTTTGGTAACTGATATTATAAAAGAATGTTTGCTGGTTCCAAGGCTATTCCATCTGAATGACAGCACTGCACTTGTTCCCATGCACCAACTTCTCTGAAACGGTGGCTCTTGTCCTCTTTATGAGATTTCAAAAAAAGGATCAGAGACATTGAAATTGACCTATGTGATATTGTTCAATGGCCAAAAAGAAGAGCTGGTTTAGTCTGGTGAAGAGGCTCTTTATATGGGAAACACATTCCACACAAGAAAAGAAGGAGAAAAGAAGGAAATGGATATTTGGAAGGCTAAAGAGCAAGAGAATACCTTCAATCAAAGCTCCACTGCCATCAAAAGGAACGGTACTAAGTGAAGCAGAGGAAGAACAGAGCAAGCATGCTTTAACAGTGACCATTGCCTCAGCAGCTGCTGTTACTGCTGCTGCTGAGGTTGTTCGCCTTACTGGGGTCTCACAATCTTCTCTTCAACGCAAGGAAAACTCAGAAGACTCTCAACCTGTTAAAACTAGGAATGATGCTCCTCAATTCCCATACCAGTGCCAGAGGGATATTAAAGAATCTGCTGCAGTCATCAAAATTCAAACTGCATTTCGGGGTTACCTGGCAAGGAAGGCTTTGAGGGCATTAAAGGGAATAGTGAAGCTTCAAGCTATTATTCGTGGCAGAGCAGTAAGACGCCAAGCCATGAGTACTCTCAAGTGTTTGCAGTCAATTGTGAGTATTCAGTCACAAGTTTGTGCAAGGAGGCTCCAAATGGTTGAAAGGAGATGTGATTACGCTGAAAATGAAGAGATGCAAGATTCTATAGACAAGATAATTAGGATGGATTCAAACAGTGCAAGAACGTGGGACGAAAACTCTGTATTGAAGGAAGAGGTAGACACCTATTGCATAAGCAAGAAAGAAACAGTTCTCAAGAGAGAAAGAATAAAAGAATACTCATTTAACCACAGAAGGTCCGCAGAGTCAGAAAGAAGTAAAGTAAATGGAAGATTGAGGTACTGGCTAGAGCAGTGGGTAGATACACAACTTTCAAAAAGTAAAGAACTAGAAGATTTAGACTCGGTTTTTAGCTCACATTCTAGAGGTGGAGAGGAATTTGGAGGAAGACAACTTAAGATGAGAAGTATTCACAGACAAAATCCAATGGAAGGATTAGATTCTCCAAGAAGATGTTTTCCTCATAGGAGGCAGTGTTCAGTGGGAGAAGAGCACTCATTTTCAAGCTCTCCTGCAACTCCAGCATACATGGCTGCAACAGAATCAGCGAAAGCAAAAGCAAGATCAACAAGCTCCCCAACAGTAAGGACGGGGTTGAATGTGGACATAAACTCTGATAGCTATTCACCATGCAAGAAAAAACTATCCATTGCATCTTCTATTAACAGTGAAGTGCTTAGTAGTGGTAGAATGACAAAGCTCAGTGGAAACCAGCAAAGATCTCCAAGCTTCAAGGGCCTTTCGGTGCCTATTAAATCAAGCCGTACTATCAAGGATCTCAGTATTAATTCAGATTGCTCACTGCCTAATTGGGATCGACATGGTTCCTTCAAATGA 1680 0.4131 MAKKKSWFSLVKRLFIWETHSTQEKKEKRRKWIFGRLKSKRIPSIKAPLPSKGTVLSEAEEEQSKHALTVTIASAAAVTAAAEVVRLTGVSQSSLQRKENSEDSQPVKTRNDAPQFPYQCQRDIKESAAVIKIQTAFRGYLARKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVSIQSQVCARRLQMVERRCDYAENEEMQDSIDKIIRMDSNSARTWDENSVLKEEVDTYCISKKETVLKRERIKEYSFNHRRSAESERSKVNGRLRYWLEQWVDTQLSKSKELEDLDSVFSSHSRGGEEFGGRQLKMRSIHRQNPMEGLDSPRRCFPHRRQCSVGEEHSFSSSPATPAYMAATESAKAKARSTSSPTVRTGLNVDINSDSYSPCKKKLSIASSINSEVLSSGRMTKLSGNQQRSPSFKGLSVPIKSSRTIKDLSINSDCSLPNWDRHGSFK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00575 458 MobiDBLite consensus disorder prediction 95 115 - -
Pste1g00575 458 SMART iq_5 125 147 IPR000048 GO:0005515
Pste1g00575 458 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Pste1g00575 458 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Pste1g00575 458 Pfam Protein of unknown function (DUF4005) 343 425 IPR025064 -
Pste1g00575 458 Pfam IQ calmodulin-binding motif 128 147 IPR000048 GO:0005515
Pste1g00575 458 PANTHER IQ-DOMAIN 5-RELATED 1 398 - -
Pste1g00575 458 Gene3D - 123 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00575 Pste-Chr1 1857759 1860596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00575 1 458 IQD Protein Family AT5G13460 46.875 1.27e-111 335