Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00561 ATGCTTTTCCAACAAAAACACAAACACTCAGCCCTGCCCTCCTTTCTCCTCCCACCCCCCCTTCCCATTTTCCTACACCCCTGGCTGTGGCCACCCTTCCTTCCATCTAACCTCAACACACTCCAACTGCCCCAGCTTCCCTTCCATCCCCACACTCCCCATCAACCTCTCATCCTCCCCATTCCGATCTCACTTCCACCTGTTCCCTCTCCTTCCTCCATTGCTCCCCCCCCTCCCCAACTGCTCCTGCTCCTTCAATGCAAACTCATCAAAAACCCCACCCACCTCCTCCCGGACTGCAGATCCACCCACCACTCCCCTCAAGACACCCAACAGTCCTGCCAGACCGACATCCTCGGCTTCCTCCAACAGTTCCTCCAAACCGCTCTCCAACTCGACTGGGACCCATCCCGTGACCCTTACTTCTCCAACTGCACCTCATGCCAGGCCACCAACGGCCTCTGCGGTTTCAATTCTTCCTCCCCAAACAACCCCTTCCTCTGCTTCCGCTTCCGCTCCCAGGCCACCCTCTCCCCTCCATGGATTCACAAATTCAAACCCCTCTTCTTCATCATCATCTCCTTCACCTTCTTGCTCCTTCTAATTTCACTCACCGCCGCCATTCTCCGCTCTAAATCCTCATCCCAAACGCAGCAAGACCCCAACACGCTCTTCCTCCACAACCACCGTTCCGCAAACCTCCTCCCTCCGGTCTTCACCTACGACGATTTATCCGCCTCCACAAACAACTTCGACTCCAAGCGTAAAATTGGCGACGGCGGCTTCGGTTCTGTCTTCCTCGCCCACCTCCGCGATGGTCGTCTCGCCGCGGTCAAGTACCTCCACCGCCACCAAGCGTCCGCCGCCTTCTCCACCAAATCCTTCTGCAACGAGATTCTCATTCTCTCTTCCATAAACCACCCAAACTTAGTCAAGCTTCACGGATACTGCAGCGACCCGAGGGGACTGCTTCTGGTCTACGATTACATCCCCAACGGAACCCTAGCGGAGCACCTGCATAACCGCAAGGGATCGCTGACGTGGCAGGTGAGGCTGGACATCGCGTTGCAAACGGCGTTAGCGATGGAGTATCTTCATTTCTCGGTCGTGCCACCGGTAGTTCACAGAGACATAACATCGTCCAATATTTTTGTGGAGAGGGATATGCGGATTAAAATGGGGGATTTCGGGTTGTCAAGACTTTTGGTGGTGCAGGATACGACGTCGTCTTCGAACGGCTTTGTATGGACCGGGCCGCAGGGGACCCCGGGCTATCTAGACCCGGATTACCACCGGTCCTTCCGGTTGACCGAGAAGAGTGACGTCTACAGTTTCGGGGTAGTGCTGTTGGAGCTTATCTCGGGAATGAGGGCCGTCGACCAGAGTAGAGACAAGCGCGAAATGGCGCTTGCCGACTTGGTCGTTTCCAGGATCCAGACGGGCCAGCTGAACCAAGTGCTCGACCCCGTTTTCAAACGCGGCGACGGCGATGCCGTGGCCGCCGTGGCGGAGCTCGCCTTCCGGTGCGTGGCGGCGGATAAGGACGACCGCCCCGATGCAAAAGAGGTGGTGCAGGAGCTGAGGCGGCTGCGGGGACGGTCGGTGGCGGCGAAGGAGTGA 1620 0.5747 MLFQQKHKHSALPSFLLPPPLPIFLHPWLWPPFLPSNLNTLQLPQLPFHPHTPHQPLILPIPISLPPVPSPSSIAPPPPQLLLLLQCKLIKNPTHLLPDCRSTHHSPQDTQQSCQTDILGFLQQFLQTALQLDWDPSRDPYFSNCTSCQATNGLCGFNSSSPNNPFLCFRFRSQATLSPPWIHKFKPLFFIIISFTFLLLLISLTAAILRSKSSSQTQQDPNTLFLHNHRSANLLPPVFTYDDLSASTNNFDSKRKIGDGGFGSVFLAHLRDGRLAAVKYLHRHQASAAFSTKSFCNEILILSSINHPNLVKLHGYCSDPRGLLLVYDYIPNGTLAEHLHNRKGSLTWQVRLDIALQTALAMEYLHFSVVPPVVHRDITSSNIFVERDMRIKMGDFGLSRLLVVQDTTSSSNGFVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGMRAVDQSRDKREMALADLVVSRIQTGQLNQVLDPVFKRGDGDAVAAVAELAFRCVAADKDDRPDAKEVVQELRRLRGRSVAAKE 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00561 539 Gene3D Phosphorylase Kinase; domain 1 226 329 - -
Pste1g00561 539 FunFam Putative serine/threonine-protein kinase At1g18390 family 227 329 - -
Pste1g00561 539 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 97 533 IPR044652 GO:0004672
Pste1g00561 539 ProSiteProfiles Protein kinase domain profile. 251 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00561 539 CDD STKc_IRAK 257 530 - -
Pste1g00561 539 Gene3D Transferase(Phosphotransferase) domain 1 330 538 - -
Pste1g00561 539 ProSitePatterns Protein kinases ATP-binding region signature. 257 279 IPR017441 GO:0005524
Pste1g00561 539 FunFam LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.5 330 539 - -
Pste1g00561 539 ProSitePatterns Tyrosine protein kinases specific active-site signature. 373 385 IPR008266 GO:0004672|GO:0006468
Pste1g00561 539 Pfam Protein kinase domain 252 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00561 539 SUPERFAMILY Protein kinase-like (PK-like) 232 527 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00561 Pste-Chr1 1804910 1806649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00561 87 539 Receptor kinase-like Gene Family AT1G69910 62.370 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pste1g00561 Pkinase 7.2e-44 CL0016