Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00536 ATGGCTCATTTGGTTTATGGTGAAACTCCATCTTTTGGAGCCTCGCACCATGGACAGGCTCAACAAATTGTTCCGTTTCCAACCACTTCGAGTTCCTTGAGGATTCTGCTCTTACATGGCAACCTGGAAATATGGGTCAAGGAGGCCAGAAACCTTCCCAACATGGACATATTCCACAAGAAAACGGGTGAAATGGTTTCCATGTTATCCAGAAAGCTTGGCGGAAAAATCGAAGGCCACATGTCAAAAGCTGGAACCAGTGATCCCTATGTTACAGTGTCTGTGGCCGGTGCTGTGATTGCCAGAACTTTTGTCATCAGAAACAGTGAGAACCCCGTTTGGACGCAGCATTTCAATGTCCCCGTTGCACATCTTGCTTCTGAAGTCCATTTTGTTGTCAAGGACAGTGATGTTGTGGGTTCTCAGGTTATTGGAGCAGTGGGAATTCCAGTGGAACAGTTATGTACTGGTACAAAAGTTGAGGGATTTTTCCCCATCCTTTGTTCTAATGGGAAACCCTGTAAGGGTGGATCAGTGTTGAGCTTATCCATTCAGTACAGCCCTGTTCAAAAGGTGCCTCTTTATAGTCGTGGAGTGGGTGCTGGCCCTGACTATCAAGGGGTCCCTGACACCTACTTTCCCCTTAGGAAAGGTGGAAAAGTTACACTTTATCAAGATGCTCATGTTGAAGAAGGTTGCCTTCCCAGTTTGAATGTGAATTATAAGCATGAAAATTGTTGGCATGACATCTTTGATGCAATAAGTAAGGCACGTCGGTTGGTTTACATTGTGGGGTGGTCTGTGTACTACAATGTTAGTCTCGTTCGGGATAGGGGTGATGGAAAGGCTTATTCTTTAGGTGACCTTCTCAAAGCCAAATCACGGGAAGGTGTCAGAGTTGGACTTATGAACACTCATGATGAGGACACTCGCCAGTTTTTCAAACACTCTTCAGTACGAGTGATTCTTTGCCCACGAGCTGGTGGAAAAGGACATAGCTGGCTTAAAAAGCAGGAAGCTGGAACAATTTATACCCATCATCAGAAGACAGTCATTGTAGATGCTGATGCAGGTCAGAATAAAAGAAAGATTATAGCTTTCATCGGAGGTCTTGATCTATGCGTGGGCCGATATGATACGCCAAACCATTCCATCTTTAGGACTTTGCAGACAACACATAAAGATGACTATTATAATGGTAACTTTGAGGGGCCTGTTACTGGTTGTCCAAGACAACCATGGCATGATTTGCATTCCCAAGTAGATGGTCCAGCAGCGTATGACATCCTCACCAATTTTGAGGAGCGTTGGTTAAGGGCAATAAAAATGCATAGACTTCAAAAGATAAAAAGTTCAAACGATGATTCCTTACTTAAAATTGATAGAATCCCCGACATTGTTGGCATTGATGAAGTTTGTTGCCAAAATGAAGATAACCGAGAGACTTGGCATGTCCAGGTCTTCCGTTCAATTGATTCCAATTCTGTGAAAGGATTTCCAAAGGAACCACAAGATGCTATAAGAAAGAACTTGGTTTGTGGAAAGAATGTACTGATAGACATGAGTGTACATTCTGCGTATGTCAAGGCAATTCGAGCAGCCCAAAAGTTCATCTATATTGAGAACCAATACTTTCTTGGCTCATCGTATAATTGGGATTCTTACAAAGACCTTGGTGCAAACAACTTAATTCCAATAGAAATTGCATTAAAAATAGCCAACAAAATCAAACAACATGAGAGATTCTCTGCTTATATTGTCATTCCTATGTGGCCTGAAGGTGTACCTACAAGTCCAACTACTCAGCGGATTCTCTTTTGGCAGTTCAAAACAATTCAAATGATGTATGAAACGATTTACAAGGCCTTACAGGAGGCCGGGCTTGAGAATAAGTATGAACCACAGGACTACTTGAATTTCTTTTGCCTTGGTAATCGTGAGATTCCTGACAATGAACAAGTTTTAAATGTTGTAAAAAATACTGGAGAAAAGACGCCTCAGGCACTCGCTAAAAAGAACCGGAGATTCATGATTTATGTTCATTCAAAAGGAATAATAGTGGATGATGAATATGTGTTAATGGGTTCTGCAAACATAAACCAGCGATCCATGGAAGGTACCAGAGATACAGAGATAGCAATGGGAGCATATCAGCCTAATCACACTTGGGCAAAGAAGCAATCCAAACCGCTTGGGCAGGTGCATGGTTATAGAACGTCACTATGGAGTGAACATATAGGAGCTGTGGAAGAATGTTTTGAGCAACCAGAGAGTCTTGAATGTGTAAGACGGATAAGGTCAATAAGTGAGTCTAACTGGAGACAGTATGCAGCTGACGAGGTAACTGAAATGAAAAGCCATCTGTTAAAATATCCACTTGAAGTTGATTCAAAGGGTAAGGTGAAGCCTATTCTTGGCTGTGAGACATTCCCGGATGTTGGTGGGAACATAAGTGGAACTTACATACCAATCAAAGAAAATCTTACCATCTGATCATTTATGAGTTCTCAAACTCAGTGGGTAGTGCAATTGACTTAGTAGCTTATTTAGAATATTTTGATTCTTGGGGGGAATAAGGGTTATAAAGGTTTGAACATATAACCTGCATTGACGTACTAGTTAGCTATCAATGACTTATTTAGGAATTAAGCTAGTCTTTGTATACAGCTTTTCTATTTTTCACTTGAATAATAAAGCAGTACTTATGTTGATAAATATTGCGACAATGGATTCTTTTAAGTGATAATTAACGTTATAGTAATATTTACTATTCCTGAAATGGAAAAGAAATATTAAA 2797 0.4065 MAHLVYGETPSFGASHHGQAQQIVPFPTTSSSLRILLLHGNLEIWVKEARNLPNMDIFHKKTGEMVSMLSRKLGGKIEGHMSKAGTSDPYVTVSVAGAVIARTFVIRNSENPVWTQHFNVPVAHLASEVHFVVKDSDVVGSQVIGAVGIPVEQLCTGTKVEGFFPILCSNGKPCKGGSVLSLSIQYSPVQKVPLYSRGVGAGPDYQGVPDTYFPLRKGGKVTLYQDAHVEEGCLPSLNVNYKHENCWHDIFDAISKARRLVYIVGWSVYYNVSLVRDRGDGKAYSLGDLLKAKSREGVRVGLMNTHDEDTRQFFKHSSVRVILCPRAGGKGHSWLKKQEAGTIYTHHQKTVIVDADAGQNKRKIIAFIGGLDLCVGRYDTPNHSIFRTLQTTHKDDYYNGNFEGPVTGCPRQPWHDLHSQVDGPAAYDILTNFEERWLRAIKMHRLQKIKSSNDDSLLKIDRIPDIVGIDEVCCQNEDNRETWHVQVFRSIDSNSVKGFPKEPQDAIRKNLVCGKNVLIDMSVHSAYVKAIRAAQKFIYIENQYFLGSSYNWDSYKDLGANNLIPIEIALKIANKIKQHERFSAYIVIPMWPEGVPTSPTTQRILFWQFKTIQMMYETIYKALQEAGLENKYEPQDYLNFFCLGNREIPDNEQVLNVVKNTGEKTPQALAKKNRRFMIYVHSKGIIVDDEYVLMGSANINQRSMEGTRDTEIAMGAYQPNHTWAKKQSKPLGQVHGYRTSLWSEHIGAVEECFEQPESLECVRRIRSISESNWRQYAADEVTEMKSHLLKYPLEVDSKGKVKPILGCETFPDVGGNISGTYIPIKENLTI 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00536 830 ProSiteProfiles C2 domain profile. 23 164 IPR000008 -
Pste1g00536 830 PANTHER PHOSPHOLIPASE D 32 819 IPR015679 -
Pste1g00536 830 PIRSF PLD_plant 27 830 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pste1g00536 830 SUPERFAMILY Phospholipase D/nuclease 208 441 - -
Pste1g00536 830 Gene3D C2 domain 35 182 IPR035892 -
Pste1g00536 830 SUPERFAMILY Phospholipase D/nuclease 510 761 - -
Pste1g00536 830 Pfam Phospholipase D C terminal 750 820 IPR024632 -
Pste1g00536 830 Pfam Phospholipase D Active site motif 677 703 IPR001736 GO:0003824
Pste1g00536 830 Pfam Phospholipase D Active site motif 343 377 IPR001736 GO:0003824
Pste1g00536 830 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 189 IPR035892 -
Pste1g00536 830 Gene3D Endonuclease Chain A 468 730 - -
Pste1g00536 830 SMART C2_3c 41 163 IPR000008 -
Pste1g00536 830 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 676 703 IPR001736 GO:0003824
Pste1g00536 830 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 342 377 IPR001736 GO:0003824
Pste1g00536 830 SMART pld_4 676 703 IPR001736 GO:0003824
Pste1g00536 830 SMART pld_4 342 377 IPR001736 GO:0003824
Pste1g00536 830 Pfam C2 domain 40 166 IPR000008 -
Pste1g00536 830 FunFam Phospholipase D 490 722 - -
Pste1g00536 830 Gene3D Endonuclease Chain A 230 461 - -
Pste1g00536 830 CDD C2_plant_PLD 36 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00536 Pste-Chr1 1722039 1727379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00536 32 830 Phospholipase D Gene Family (Wang group) AT2G42010 65.105 0.0 1181
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00536 1 1722039 1727379 Pste1g00536 1 1722039 1727379 ECH