Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00516 ATGGCGTGTAGAGGAGAGGCAGAGGTGGTGGGAAGTTGGGAGTGGGAAGAGAAGAGTAAGAAGATAGAAGAGTTTGAGTACAGTGAGCTGGAAGCGGCGACGAATGGGTTCTCGGAGAGGAAGCTGGTGGGGAAAGGGAGCCACGGGTACGTGTACAAGGCGGTGGTTGGAGGGCGAAGGGTGGCGGTGAAGCGTCCTTGTGGGGGTGAGGTGGATAACGAGATAGACATATTGTCGAAAATACAGAGCCCTCGTTTGGTTAACTTGGTTGGATTCAGCAGCTGTAGGGAAAGAAGGCTTCTGGTGGTGGAATTCATGAGCAATGGGACACTTTACGATGTTCTTCATTCGACTGATAACCCCCCGAATTGGGGGAGGAGGATTCGTCTTGCACTTCAAACTGCGAAAGCCATAATGACTATTCACTCTTGCAGCCCTGCAGTGATTCACCGAGACATCAAGTCTGCCAATGTTCTACTGGATCGGCGTTACAATGCCAGGTTAGCTGATTTTGGTCTTGCTTTAAGGGAGGGAAGCCATCTTCCTCCTCCTCCTCCTGCCGGCACCATTGGTTATCTTGACCCTTCTTATGTCTCTCCCCATCATCTTAGCACTAAAACTGATGTTTTTAGCTTCGGCATTTTGCTTTTGGAGATCATCAGTGGCAGGAAGGCCATTGACATGAGCTTTTCCCCTCCTTCCATTCTCGATTGGGCCATTCCTCTCATCAAAACATCCAACTTTTTGTCTCTCTATGATCCCCGAATTCCACCTCCCAACCATCCCATTCTCCGTAACCATCTCCCCGTCATTGCCTCCAAGTGTGTCAGATCTTCCTCCCTCCGACGCCCCTCCATCAACCACGTTGTTTCTTGGCTTTCCTCCCTCTCTAAATTCCTCCCTCCCATTCTTTCCTTTCCCCAACCCTTGCATCCTCTCCCTCCCTCTCTTCTCATCCCTTCCCTCTCTCCACCAATTTGA 981 0.5056 MACRGEAEVVGSWEWEEKSKKIEEFEYSELEAATNGFSERKLVGKGSHGYVYKAVVGGRRVAVKRPCGGEVDNEIDILSKIQSPRLVNLVGFSSCRERRLLVVEFMSNGTLYDVLHSTDNPPNWGRRIRLALQTAKAIMTIHSCSPAVIHRDIKSANVLLDRRYNARLADFGLALREGSHLPPPPPAGTIGYLDPSYVSPHHLSTKTDVFSFGILLLEIISGRKAIDMSFSPPSILDWAIPLIKTSNFLSLYDPRIPPPNHPILRNHLPVIASKCVRSSSLRRPSINHVVSWLSSLSKFLPPILSFPQPLHPLPPSLLIPSLSPPI 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00516 326 PANTHER OS01G0253100 PROTEIN 20 296 - -
Pste1g00516 326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Pste1g00516 326 Pfam Protein kinase domain 38 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00516 326 Gene3D Transferase(Phosphotransferase) domain 1 106 300 - -
Pste1g00516 326 ProSiteProfiles Protein kinase domain profile. 37 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00516 326 SUPERFAMILY Protein kinase-like (PK-like) 21 317 IPR011009 -
Pste1g00516 326 SMART serkin_6 37 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00516 326 PIRSF ILK 4 301 - -
Pste1g00516 326 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Pste1g00516 326 ProSitePatterns Protein kinases ATP-binding region signature. 43 64 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00516 Pste-Chr1 1657809 1658789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00516 17 319 Receptor kinase-like Gene Family AT3G59420 41.121 2.78e-71 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pste1g00516 Pkinase 2.2e-33 CL0016