Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00510 CTCAAAACAACAAGCTCTCTCTTACAACGCAAAATTAATTTGTAGAAAAAACGGAGAGAGGAAAAAAGGAGGAACAACAACAACAACGGGGAGAGAGAGAGTGGTTCTTCACACTCTCGCATTCTGCAGATCAGATCCAAACATTCCGAATTCCTAGATCTATTTCCCCTCTCCAATCTCTGATTCGCGATTTCAATTTCGTGTTTTCGGCGCAATTAGGTTTTCAGAGATCGAATGGCGTGCATCAAAGGGGTGAATCGATCGGCGTCGGTGGCGCTGGCGCCGGACGCGCCTTACCTTGCCGCCGGTACCATGGCTGGCGCCGTTGATCTGTCATTCAGCTCGTCCGCAAATCTCGAGATATTCAAGCTCGATTTCCAGTCCGACGATTCGGAACTACCTCTCGTCGCTGAGTGCCCGAGCTCCGACCGCTTCAACCGTCTCTCATGGGGGAAGAACGGTTCTGGCTCCGAAGACTTCGCCCTCGGCCTAGTTGCCGGTGGATTGGTCGATGGCAACATTGACATCTGGAATCCTCTCACTCTGATCCGCTCGGAGTCAAATCAAAGTTCTCTTGTTGGACACCTTGTAAGGCATAAAGGGCCGGTTCGTGGTCTCGAGTTTAATGTCATTGCACCAAATCTTCTTGCATCTGGGGCTGAGGATGGTGAAATTTGCATATGGGATTTGGTCAATCCTTCAGAGCCTACACATTTTCCACCACTGAAGAGTACTGGTTCTGCTTCCCAGGGGGAAATTTCATTCTTATCTTGGAACAGTAAAGTCCAACACATACTAGCATCTACTTCGTATAATGGGACCACAGTCGTCTGGGACCTAAAGAAGCAAAAGCCAGTGATAAGCTTTGCAGATTCTGTTAGAAGGCGGTGCTCAGTTTTGCAGTGGAACCCTGATGTTGCCACACAACTTGTCGTTGCATCAGATGAAGATGGCTCTCCTTCTTTGAGGCTTTGGGATATGAGGAATATAATTTCACCAATAAAGGAGTTTGTGGGACACACTAGAGGTGTAATTGCAATGTCGTGGTGTCCCAATGATAGCTCTTATTTGCTTACTTGTGGCAAAGATAGTCGAACTATATGCTGGGACATGATTTCTGGAGAGATTGCCTATGAATTGCCAGCTGGGACCAACTGGAATTTTGATGTGCATTGGTACCCTAAGATACCTGGAGTAATATCAGCATCTTCCTTTGATGGAAAAATTGGCATATATAATATTAAGGGTTGCCGTCAAGATGGTACTGGGGAAAATGATTTTGGTGCAGTAGCACTGAGAGCACCAAAATGGTATAAACGTCCTGCTGGTGTGTCTTTTGGCTTTGGAGGCAAACTTGTGTCCTTTCATCCCAAGACATCTGCTGCAGGTTCTCCAGCTGGTGCTTCGGAGATTTATGTGCATAACTTGGTCACTGAAGATGGTCTAGTCAGTCGTTCATCCGAGTTTGAAGCTGCAATGCAAAATGGGGAAAGGTCTTTATTGAGGGTTTTATGTGATAAAAAATCTCAAGAATCAGAATCTGAGGAGGAAAGAGAAACATGGGGCTTTTTGAAGGTTATGTTTGAAGATGACGGGACTGCACGGACAAAACTCCTCTCACATCTTGGTTTCAATGTACCTAGTGAAACAAAAGACACAGTTAATGACGATCTTTCCCAAGAATTTAATGGTCTTGGACTTGAGGACACAACTGCTCCTGTTGACAATGTAGGACATGTAGCTCCTAATGAAACCACTATTTTCTCTAATGATAATGGGGAGGATTTCTTTAACAATCTTCCAAGTCCCAAAGCTGATACCCCTGTGTCTGCTTCTGCTGGCAACTTTGTTGTTGCGGAAAATGCCAATGGTTCTGAGAAGATCCAAGATGATGTAGAAGTGGAGGAGAGCAATGACTCTTCATTTGACGACAGTGTTCAGCATGCTTTAGTTGTTGGGGACTACAAGGGGGCAGTTATGCAATGCATTTCTGCAAATAAATGGGCTGATGCCTTAGTTATTGCTCATGTTGGGAATGCTTCCTTGTGGGACAGTACACGTGATCAATACCTTAAGATGGTCCGATCACCATACTTAAAGATTGTATCAGCGATGGTGAGCAATGATCTCTTGAGCTTAGTAAACACTAGACCCCTGAAATTTTGGAAAGAAACCCTTGCACTTCTTTGTAGTTTTGCTCAGAGAGATGAATGGACTATGCTTTGTGACACACTTGCTTCAAAACTCATGGGGGCTGGCAATACATTAGCTGCAACTCTCTGTTATATATGTGCTGGCAATATTGATAAAACTGTTGAAATATGGTCAAGAAGCCTGTCAAATGAGCATGGGAGAAAATCTTATGTCGACCTTCTTCAGGATTTAATGGAGAAGACTATTGTTCTTGCCTTGGCAACTGGGCAGAAGCGGTTTAGTGCTTCTTTGTGCAAGCTTGTTGAGAAGTATGCTGAAATTTTAGCAAGTCAAGGGCTATTGACTACAGCGATGGAATATTTAAAACTTTTGGGTTCTGAAGAACTGACACCTGAACTTACGATTTTAAAGGATCGAATTGCACTTTCTACAGAACCTGAGAAAGACTTCAAAACTACTGCTTTTGACATATCTCAACCCCATAGTGGGTCCTATTATGGTGCTGATAATTCTAATTACAATAGAAATTATTATCAGGAGCCAGTATCCACGCAAGTGCAGCATGGTGTTTCTGGAATTCAGTATCCTGAGAGCTATCAGCAGCCATTTGATCCTAGATATGGAAGAGGGTATGGTGCTCCTACTCCACCCCAGCATGCTCAACAGCCTAATTTGTTTGTTCCACCACAGACTACTCAGGTTGCACAAACTCCCCAGCCAACTTTCTCTAGTACTGCTGTTGCACCTCCACCTTTGAGAACTTTTGATCCCCAAACTCCTCCCGTGCTTAAAAATGTGGAGCTATATCAGCAGCCCACACTGGGTTCTCAATTGTATAATACAACCACCAATCCACCTTACCAACATACAACGCCAGCTCCATCACAAGTGGGCTTGGGTCATCATGGCCAGAACTTGTCGTCACAAGTTGTGGCACCTACCCCAAATCCAATGGGATTCATGCCAGTCTCTGGTTCTGGTGGTGTCCAAAGACCTGGGGTGGGACCTGTACAACCTCCCAGTCCCCCTCAAGTGCAACCAGCTGCAGCACCACCAGCTCCGCCTCCTACTTTGCAGACTGCTGATACTTCAAAAGTACCTGGGCATCAAATGCCTATTGTCACAACTTTGACAAGGCTTTTCAACGAGACATCAGACGCCCTTGGTGGTTCACGTGCAAACCCAGCTAAGAAGCGGGAGATAGAAGACAACTCAAAGAGACTTGGTGGGTTGTTTGCCAAGTTGAATAGTGGAGACATATCAAAAAATGCTTCCGATAAACTCCTTCAGCTTTGTCAGGCTTTAGACAATGGTGATTTTGGTACTGCCCTACAAATTCAGGTTGTTCTTACCACTACTGAGTGGGATGAATGCCAGTCCTGGTTAGGTTCACTAAAGCGGATGATCAAGACAAGGCAGAGTACTACTGCCTTCTCTAGATTTCAGGTGCAGGGTTTTGATTCTATGTGCTTCTTGCTGTGTCTGCAGCTTTCACCTAGACTGTTATTAAAAGCTGTTACTGAAGGTAGTTTTCAGGAAATGATCAGAAAAAATTTAGCAGATTGTTTTTTCAACCAATATTTGTAA 3741 0.4456 MACIKGVNRSASVALAPDAPYLAAGTMAGAVDLSFSSSANLEIFKLDFQSDDSELPLVAECPSSDRFNRLSWGKNGSGSEDFALGLVAGGLVDGNIDIWNPLTLIRSESNQSSLVGHLVRHKGPVRGLEFNVIAPNLLASGAEDGEICIWDLVNPSEPTHFPPLKSTGSASQGEISFLSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFADSVRRRCSVLQWNPDVATQLVVASDEDGSPSLRLWDMRNIISPIKEFVGHTRGVIAMSWCPNDSSYLLTCGKDSRTICWDMISGEIAYELPAGTNWNFDVHWYPKIPGVISASSFDGKIGIYNIKGCRQDGTGENDFGAVALRAPKWYKRPAGVSFGFGGKLVSFHPKTSAAGSPAGASEIYVHNLVTEDGLVSRSSEFEAAMQNGERSLLRVLCDKKSQESESEEERETWGFLKVMFEDDGTARTKLLSHLGFNVPSETKDTVNDDLSQEFNGLGLEDTTAPVDNVGHVAPNETTIFSNDNGEDFFNNLPSPKADTPVSASAGNFVVAENANGSEKIQDDVEVEESNDSSFDDSVQHALVVGDYKGAVMQCISANKWADALVIAHVGNASLWDSTRDQYLKMVRSPYLKIVSAMVSNDLLSLVNTRPLKFWKETLALLCSFAQRDEWTMLCDTLASKLMGAGNTLAATLCYICAGNIDKTVEIWSRSLSNEHGRKSYVDLLQDLMEKTIVLALATGQKRFSASLCKLVEKYAEILASQGLLTTAMEYLKLLGSEELTPELTILKDRIALSTEPEKDFKTTAFDISQPHSGSYYGADNSNYNRNYYQEPVSTQVQHGVSGIQYPESYQQPFDPRYGRGYGAPTPPQHAQQPNLFVPPQTTQVAQTPQPTFSSTAVAPPPLRTFDPQTPPVLKNVELYQQPTLGSQLYNTTTNPPYQHTTPAPSQVGLGHHGQNLSSQVVAPTPNPMGFMPVSGSGGVQRPGVGPVQPPSPPQVQPAAAPPAPPPTLQTADTSKVPGHQMPIVTTLTRLFNETSDALGGSRANPAKKREIEDNSKRLGGLFAKLNSGDISKNASDKLLQLCQALDNGDFGTALQIQVVLTTTEWDECQSWLGSLKRMIKTRQSTTAFSRFQVQGFDSMCFLLCLQLSPRLLLKAVTEGSFQEMIRKNLADCFFNQYL 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00510 1168 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 118 152 - -
Pste1g00510 1168 FunFam Protein transport protein SEC31 homolog B 1002 1116 - -
Pste1g00510 1168 Gene3D Functional domain of the splicing factor Prp18 1006 1118 - -
Pste1g00510 1168 FunFam Protein transport protein SEC31 homolog B 353 784 - -
Pste1g00510 1168 MobiDBLite consensus disorder prediction 961 1007 - -
Pste1g00510 1168 MobiDBLite consensus disorder prediction 975 998 - -
Pste1g00510 1168 Gene3D - 352 784 - -
Pste1g00510 1168 ProSiteProfiles Trp-Asp (WD) repeats profile. 118 152 IPR001680 GO:0005515
Pste1g00510 1168 PANTHER SEC31-RELATED PROTEIN 3 1113 IPR040251 GO:0006888
Pste1g00510 1168 Gene3D - 1 337 IPR015943 GO:0005515
Pste1g00510 1168 SMART WD40_4 252 292 IPR001680 GO:0005515
Pste1g00510 1168 SMART WD40_4 111 151 IPR001680 GO:0005515
Pste1g00510 1168 SMART WD40_4 161 201 IPR001680 GO:0005515
Pste1g00510 1168 SMART WD40_4 295 335 IPR001680 GO:0005515
Pste1g00510 1168 SMART WD40_4 204 248 IPR001680 GO:0005515
Pste1g00510 1168 SMART WD40_4 54 100 IPR001680 GO:0005515
Pste1g00510 1168 SUPERFAMILY WD40 repeat-like 12 337 IPR036322 GO:0005515
Pste1g00510 1168 ProSitePatterns Trp-Asp (WD) repeats signature. 138 152 IPR019775 -
Pste1g00510 1168 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 301 IPR001680 GO:0005515
Pste1g00510 1168 FunFam Protein transport protein SEC31 homolog B 1 337 - -
Pste1g00510 1168 Pfam Sec23-binding domain of Sec16 568 763 IPR024298 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00510 118 313 Miscellaneous Gene Families AT5G08390 24.242 8.58e-10 61.2