Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00502 AGGAATTAAAGATGGGAACCACGTACATGTACGTGTTATTATTGCTTCATTCATCTATGTTTATTACTGGGGCAGAGCAAAGAGTGGCTGGTTCGGAAAATATCATAGCAAATAACGGCGGCTACAGTTACGGCTCTCCTGCTCCTCCACGTGGCCCGAAGTGTGAGCCTGCAAACGTGCGTTTGGAGAGAGCACGAAAAGCGCTTTCCAAATTCACCGACCCAAACGGGTTTACGGAAAGCTGGAAGGGTGACGACCCTTGCAAGTTCAGAGGGGTGCGATGCTCCAAGTTTCCCGAGACTGGGCAGCAAGCAGTGGCGGGAATAGACCTAAACGGGGCGGCGCTCGAAGGGAAAAGCTGTCAACCGGCGTTTCTGGCTGGCATTTTGGATACGATCCCTGAGCTCACGTTCTTCCATGTGAACTCCAACAACTTCAGTGGTGCCATTCCGAATGAAATTATTACATACAAATATTTCTTTGAACTTGACCTCAGTAACAATCAACTGGAGGGTCAGTTTCCGCAGCAGGTGCTGGAGTCTAAACAGTTGGTGTTCCTCGACCTCAGGTTCAACCGTCTCTGCGGCCAGATTCCCGCGCAGCTGTTTCAGTTGGATTTGGATGTTATTTTCATCAACAACAACCAGTTCACTGGCAATCTCCCTGATAACTTTGGCTCCACCCCGGCCAGGTACCTCACTTTCGCCAACAACAAACTCACGGGTCCAATCCCCTCAAGCATTGGCCAAGCTTCTAAAACCCTAACTGAAGTGTTGTTCTTGGGCAACAACTTTGAGGGTTGCTTGCCCTACCAGATTGGGTACCTCAAAAAGGCCACAGCCTTTGATGTGAGCAACAACAAGTTAACAGGTCCCATCCCACACTCCTTTGGGTGCTTGGAAAGCATTCGGTACCTCAACTTGCAGCAGAACCACTTCTATGGAGAAGTTCCAGAGATGGTGTGTCAGCTCCCTGGCCTCTGCAACAAGGGCAGCTTGTCCTTATCCGACAACTATTTCACTCAGGTGGGTCCTGCATGCAGGAAACTCATCCAAAACAAAGTGCTTGATGTAAGCAACAACTGCATCCTGGGGCTTCCAAATCAAAGGCCACATGGACAGTGCACACAATTCTTCTCTCAGGTCAAGCCCTGCCCAAATCCAAAGTATCTCCATTATGTCCCTTGTAAAGGATCCTATCATCCCCAAACCCTCTCCTCCGCCGCCCCCGCTCCTCCCCTCACTTACAACTCTCTCGACCCTCATTATTTTCATCATCACTAGTTACCTCACATGTTATCCATCACCACGTTATTTATGATCCAACTAATAAAAGATTAGATCTATTAATTAATTATAAGTTACATATTTATTGATTGAGATAAAGTAGTAATCAAGAAACCATGTAATAATATCTCAATTTATGGATCTGGTGTATTATAGAATGAAAATCATTTCTTCTTTATTCATGTCTAATTTTTCACAAATTAAAATTTGTCATGTCATAAATTGTATAAGAGATAATATTTATTTAAAAAAATTGAGTGATTTAAAAAATGGCATGACAAATTTTAATCGGAAGAATAAAGACAAAATGAAGAG 1601 0.4441 MGTTYMYVLLLLHSSMFITGAEQRVAGSENIIANNGGYSYGSPAPPRGPKCEPANVRLERARKALSKFTDPNGFTESWKGDDPCKFRGVRCSKFPETGQQAVAGIDLNGAALEGKSCQPAFLAGILDTIPELTFFHVNSNNFSGAIPNEIITYKYFFELDLSNNQLEGQFPQQVLESKQLVFLDLRFNRLCGQIPAQLFQLDLDVIFINNNQFTGNLPDNFGSTPARYLTFANNKLTGPIPSSIGQASKTLTEVLFLGNNFEGCLPYQIGYLKKATAFDVSNNKLTGPIPHSFGCLESIRYLNLQQNHFYGEVPEMVCQLPGLCNKGSLSLSDNYFTQVGPACRKLIQNKVLDVSNNCILGLPNQRPHGQCTQFFSQVKPCPNPKYLHYVPCKGSYHPQTLSSAAPAPPLTYNSLDPHYFHHH 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00502 423 Pfam Leucine rich repeat N-terminal domain 66 92 IPR013210 -
Pste1g00502 423 Gene3D Ribonuclease Inhibitor 60 225 IPR032675 -
Pste1g00502 423 SUPERFAMILY L domain-like 65 363 - -
Pste1g00502 423 Gene3D Ribonuclease Inhibitor 226 389 IPR032675 -
Pste1g00502 423 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 46 405 - -
Pste1g00502 423 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 124 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00502 Pste-Chr1 1614055 1616779 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00502 49 381 Trihelix Transcription Factor Family AT1G12040 41.791 5.09e-80 259