Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00472 GAAGAGGAGTTGAAAACTTTGCAACGGAATAGAGACGGTGGCGCTTGGATTGTAAAAAAACGCATGGGAAAGTACGGTTACACAGTGAGCGAGCGCGTTGCTTCGTCGCGAACGCTTCGACTCGGCCGAGTTCAGCCTCAAGTCCCCGGTCACCGCACCATCTTCTGCAACGATCGCCAAGCCAACCTTCCCGTTCGCTTCAAGGGAAATTCAATATCGACTACAAAGTACAACGTTTTCACTTTTCTACCAAAAGGATTGTTTGAACAGTTTAGGCGGGTTGCCAATCTCTACTTCCTTTCAATCTCAATTTTGTCAACCACACCAATCAGCCCTGTGTCTCCAATAACTAATGTGCTTCCTCTGTCTCTGGTGCTTCTCCTCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAAAATGATAAGGCTGTAAACAACAATGTAGTAGATGTTTTGCAAGATCAAAAGTGGGTATCTATACCCTGGAAAAAGTTGCAAGTTGGTGATGTCGTCAAGGTTAAGCAGGATGGATTCTTTCCTGCAGATCTGCTTTTCCTGGCTAGTACGAATGTAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGTGAAACCAATTTAAAGATTAGGAAAGCATTGGAAAACACTTGGGATTACCTGACTCCCGAGAAGGCATCTGAGTTTAAAGGTGAAATTCAGTGTGAACAACCGAACAATTCATTGTATACCTTCACTGGAAATCTTATAATTCAAAACCAAATACTTCCTGTCAGTCCAAACCAACTTCTGTTGCGAGGATGTAGTCTCGGGAATACAGATTATATTGTTGGGGTTGTTATTTTTACAGGACATGAAACAAAGGTGATGATGAATGCTATGAATATTCCTTCCAAAAGAAGTACATTGGAGAAGAAGCTTGACAAGCTCATACTTGCACTCTTTGGGACGCTCTTTGTGATGTGTTTCATTGGAGCTGTTGGCAGTGCCATCTTTGTAAACAAGAAGTATTTCTATTTACGTCTTGAATCATCAGAGGAGGGCTCAGGACAGTTCAACCCAAGAAACAGATTTTTGGTTTTTCTTCTGACGATGTTGACCCTCATCACTTTATACTCAACAATCATTCCCATTTCTCTTTATGTATCAATAGAGATGGTCAAATTTATCCAGTCCACTCAATTCATTAACAAGGACTTGCACATGTACCATCAGGAAACTAATACCCCTGCATTGGCCAGAACTTCAAATTTGAATGAAGAACTCGGGCAGGTGGAATACCTCTTCACTGACAAAACTGGGACTCTGACAAGAAACTTAATGGAGTTCTTTAAGTGTTCAATTGGAGGAGAGGTCTATGGAAAAGGTGTGACTGAAATTGAGAAGGGAATAGCAGAGCGTAGCGGCTTAAAACTTGAGGAAAATATATCACTCAATGCATCGCGAGAGAGGGGTTTTAATTTTGATGATTCTAGGCTTATGAGAGGAGCTTGGAGGAATGAGCTGAATCCTGATAGCTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTGCTTCCTGAGGGTGATGAGACCCCCGAGAAGATCAAATATCAAGCTGCATCACCTGATGAGGCTGCTTTGGTTATTGCTGCAAAGAACTTTGGTTTTTTCTTTTTCAGACGCACTCCTACAATGATATATATTCGAGAATCTCATGTTGAGAAGATGGGTAAAATTCAAGATGTATCATATGAGATTTTAAATGTGCTTGAGTTTAACAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGCTATCCAGATGGAAGGCTTGTGCTGTACTGCAAGGGAGCTGATACTGTCATATATGAGAGATTAGATGATGGTTATAATGATATCAAAAAAGTTACTAGGGAACATTTGGAGCAGTTTGGGTCTGCTGGACTACGCACATTATGTCTGGCTTACAAAGAATTGCTTCCCAATGTTTATGAAAGCTGGAATGAGAAGTTCATCAAAGCCAAATCTTCTCTACATGATCGAGAAAAGAAGTTAGATGAGGTGGCAGAGCTTATAGAAAATGATCTCATTTTGATTGGTAGCACTGCTATAGAAGACAAGCTTCAAGAGGGAGTGCCAACCTGCATAGAAACTCTTCAAAGAGCTGGCATTAAAATTTGGGTGCTTACAGGGGACAAGGTTGAAACAGCAATTAATATAGCCTACGCATGCAATTTAATAAACAACGAGATGAAGCAATTTATTATTAGTTCAGAAACAGATGCTATTAGAGAAGTTGAAGACAGGGGGGACCAAGTAGAAATTGCACAATTTATCAAAGAAGAAGTGAAGAAAGAACTGAAGAAGTGCCTTGAAGAAGCGCATAGCTATTTTAGCTCTCTAACTGGACCAAAACTAGCACTTGTAATTGATGGAAAATGTCTAATGTATGCATTGGATCCCAGTTTGAGAGTCATGCTACTGAATTTGAGCATGAACTGCCATGCTGTTGTTTGCTGCCGAGTTTCTCCTTTGCAGAAAGCACAGGTCACAAGTTTGGTTAAGAAGGGTGCACAGAAAATAACACTTAGCATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGCATTGGCATAAGTGGTTTGGAAGGGATGCAAGCCGTGATGGCTAGTGATTTTGCCATTGCACAGTTTCGTTACCTTGCAGATTTACTTCTGGTTCATGGCCGGTGGTCATATCTTCGAATATGCAAGGTGGTGACATACTTCTTTTACAAGAACCTCACATTCACTCTTACTCAATTTTGGTTTACCTTTCAAACTGGATTTTCTGGCCAGAGATTCTACGATGATTGGTTTCAGTCATTATATAATGTTATCTTCACTGCACTTCCTGTGATCATTGTTGGACTATTTGATAAGGATGTCAGTGCATCTCTATCCAAGAAGTATCCTGAACTATACAGAGAGGGAATAAGAAATGTCTTTTTCAAATGGAGAGTTGTAGCTATATGGGCCTTTTTTTCCATCTACCAGTCGCTTATATTCTTCTATTTTGTGAGTTCATCAAGTTTAAGTGCTAAAACTTCAGCAGGAAAGATGTTCGGACTCTGGGATGTCAGTACAATGGCCTTCACATGTGTTGTAGTAACTGTTAACTTGCGACTTCTTATGATGTGTAATTCAATCACAAGATGGCACTATATTAGTGTTGGTGGAAGTATATTAACATGGTTTATTTTTGTCTTTATATATTCTGGGGTCAGCACACCAATTGATCGACAGGAGAATCTGTATTTTGTCATATATGTTCTGATGAGTACATTATATTTCTACCTCACATTAGTTCTTGTTCCTGTTGCGGCACTTTTTGGTGACTTTGTTTACGAAGGGGTTCAGAGATGGTTCTTCCCCTACGATTATCAAATTATTCAAGAAAAGCATAGACATGATATTGCTGACACCAGCAGGGCACAATTTCTAGAGATAGGAAACCAGCTTACTCCAGCTGAGGCTAGGAGCCATGCCATATCTCAACTCCCACATGAGGTATCAAAGCACACCGGGTTTGCTTTTGATTCACCTGGTTATGAATCCTTTTTTGCTGCACAGCTTGGATATTCCCCACAAAAGGCATGGGATGTAGTAAGGCGAGCTAGCATGAGATCTCGGCTGAAGATTGGACAAGAAAAATAATTTTGTTCAAACAAAAAATAAAGTAATTTGGAGTAGGATGGTTGTATATTTACTTTAGTTTTGGTCTTTTGTTTTGAGAGCCATCCTTAGATTTGTAAAATTAGCATGTGCCATATTAATTATTGGTAGTTTTCATCAAGGTATATTTTGAGAGTCAATCTTCCCTCATTGCCAATTGTTTCTTGAGGGAAGTATAGAAGGTTTTCTAATGTTTCAGATGTATATCTACAATTTGTAGGAAGTGAGGAATTCTTTTAAATTTAGAGGTTGTATGAACTTATTTTCAGTTTTTATAATATTTTCTGG 4011 0.3969 MGKYGYTVSERVASSRTLRLGRVQPQVPGHRTIFCNDRQANLPVRFKGNSISTTKYNVFTFLPKGLFEQFRRVANLYFLSISILSTTPISPVSPITNVLPLSLVLLLSLIKEAFEDWKRFQNDKAVNNNVVDVLQDQKWVSIPWKKLQVGDVVKVKQDGFFPADLLFLASTNVDGVCYIETANLDGETNLKIRKALENTWDYLTPEKASEFKGEIQCEQPNNSLYTFTGNLIIQNQILPVSPNQLLLRGCSLGNTDYIVGVVIFTGHETKVMMNAMNIPSKRSTLEKKLDKLILALFGTLFVMCFIGAVGSAIFVNKKYFYLRLESSEEGSGQFNPRNRFLVFLLTMLTLITLYSTIIPISLYVSIEMVKFIQSTQFINKDLHMYHQETNTPALARTSNLNEELGQVEYLFTDKTGTLTRNLMEFFKCSIGGEVYGKGVTEIEKGIAERSGLKLEENISLNASRERGFNFDDSRLMRGAWRNELNPDSCKEFFRCLAICHTVLPEGDETPEKIKYQAASPDEAALVIAAKNFGFFFFRRTPTMIYIRESHVEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLDDGYNDIKKVTREHLEQFGSAGLRTLCLAYKELLPNVYESWNEKFIKAKSSLHDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPTCIETLQRAGIKIWVLTGDKVETAINIAYACNLINNEMKQFIISSETDAIREVEDRGDQVEIAQFIKEEVKKELKKCLEEAHSYFSSLTGPKLALVIDGKCLMYALDPSLRVMLLNLSMNCHAVVCCRVSPLQKAQVTSLVKKGAQKITLSIGDGANDVSMIQAAHVGIGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYREGIRNVFFKWRVVAIWAFFSIYQSLIFFYFVSSSSLSAKTSAGKMFGLWDVSTMAFTCVVVTVNLRLLMMCNSITRWHYISVGGSILTWFIFVFIYSGVSTPIDRQENLYFVIYVLMSTLYFYLTLVLVPVAALFGDFVYEGVQRWFFPYDYQIIQEKHRHDIADTSRAQFLEIGNQLTPAEARSHAISQLPHEVSKHTGFAFDSPGYESFFAAQLGYSPQKAWDVVRRASMRSRLKIGQEK 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00472 1213 SFLD p-type atpase 393 893 IPR044492 -
Pste1g00472 1213 Gene3D - 539 675 IPR023299 GO:0000166
Pste1g00472 1213 FunFam Phospholipid-transporting ATPase 107 276 - -
Pste1g00472 1213 Pfam Phospholipid-translocating ATPase N-terminal 33 97 IPR032631 -
Pste1g00472 1213 NCBIfam HAD-IC family P-type ATPase 815 921 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste1g00472 1213 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 1166 - -
Pste1g00472 1213 SUPERFAMILY Calcium ATPase, transduction domain A 128 272 IPR008250 -
Pste1g00472 1213 SUPERFAMILY Calcium ATPase, transmembrane domain M 44 1120 IPR023298 -
Pste1g00472 1213 Gene3D - 676 882 IPR023214 -
Pste1g00472 1213 Gene3D - 111 276 - -
Pste1g00472 1213 FunFam Phospholipid-transporting ATPase 519 674 - -
Pste1g00472 1213 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 418 681 IPR023299 GO:0000166
Pste1g00472 1213 FunFam Phospholipid-transporting ATPase 675 882 - -
Pste1g00472 1213 CDD P-type_ATPase_APLT_Dnf-like 48 1002 - -
Pste1g00472 1213 ProSitePatterns E1-E2 ATPases phosphorylation site. 413 419 IPR018303 -
Pste1g00472 1213 Pfam Cation transport ATPase (P-type) 511 603 - -
Pste1g00472 1213 PRINTS P-type cation-transporting ATPase superfamily signature 842 861 - -
Pste1g00472 1213 PRINTS P-type cation-transporting ATPase superfamily signature 411 425 - -
Pste1g00472 1213 SFLD C1.7: P-type atpase like 393 893 - -
Pste1g00472 1213 SUPERFAMILY HAD-like 399 884 IPR036412 -
Pste1g00472 1213 Pfam E1-E2 ATPase 128 368 - -
Pste1g00472 1213 Pfam Phospholipid-translocating P-type ATPase C-terminal 870 1120 IPR032630 -
Pste1g00472 1213 NCBIfam phospholipid-translocating P-type ATPase 46 1128 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00472 Pste-Chr1 1542289 1561421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00472 7 1212 Primary Pumps ATPases AT1G59820 78.394 0.0 2030