Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00470 ATGGGCCACCCGTGTGGTGTGAGTGAGCGTGTCCGCATAGTTGCCTGGTACGTGGTCCCCTTCAAAAAGCTATATATATGGCCGGGACACTCCCTTGTTGAGCTAAAACCGGAAGCAGAAGCAAATAGAAGAACAAGTTGTGGGATGGAGAGTTTGAAGGAGCGGGAGTCAGAAGTATCTGAAACGAGTTCCCCTTCAATGAGGAGCCAGTCTGACGAAGAGGTGATACTAGCGTCGGCGCGACCCAAGAAGCGAGCGGGGCGCAGAGTATTCAAGGAGACCAGGCACCCCGTCTACCGCGGCGTGCGGCGGAGGAACAACAACAAGTGGGTATGCGAAATGCGAGTTCCCAACAACAACTCCCGAATTTGGCTCGGCACTTACCCCACCCCCGAAATGGCCGCACGTGCTCACGACGTTGCCGCCCTCTCCCTCAGGGGAAAGTCCGCCTGCCTCAATTTCGCCGACTCCGTTTGGCGCCTCACTCTCCCCGCCACCACCGACCTTCACGACATCCGCCGTGCCGCCGTCCACGCTGCCGAGTCATTTGCTCCTCTCGACCACGTTCATCCCTGCCTCCAACTCCACCAGCAGCCTCAAGAGCCTCTTCAACCCCATGAAGATCAAGATCAAGATCAAGAGTGGCACGATTTCCTTTTGAGTATTGCTGATGAGCCTTTGATGTCACCTCCTCCTTGTGCCAGAGATAATAGAGACTGGAATGACCTCGACATATTTGATGCTGAAGTCTCGTTATGGAACTTTTCTATTTAA 774 0.5465 MGHPCGVSERVRIVAWYVVPFKKLYIWPGHSLVELKPEAEANRRTSCGMESLKERESEVSETSSPSMRSQSDEEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNNNSRIWLGTYPTPEMAARAHDVAALSLRGKSACLNFADSVWRLTLPATTDLHDIRRAAVHAAESFAPLDHVHPCLQLHQQPQEPLQPHEDQDQDQEWHDFLLSIADEPLMSPPPCARDNRDWNDLDIFDAEVSLWNFSI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00470 257 ProSiteProfiles AP2/ERF domain profile. 98 155 IPR001471 GO:0003700|GO:0006355
Pste1g00470 257 PRINTS Ethylene responsive element binding protein signature 121 137 IPR001471 GO:0003700|GO:0006355
Pste1g00470 257 PRINTS Ethylene responsive element binding protein signature 99 110 IPR001471 GO:0003700|GO:0006355
Pste1g00470 257 FunFam Ethylene-responsive transcription factor 2 97 156 - -
Pste1g00470 257 Pfam AP2 domain 97 147 IPR001471 GO:0003700|GO:0006355
Pste1g00470 257 MobiDBLite consensus disorder prediction 43 73 - -
Pste1g00470 257 SMART rav1_2 98 161 IPR001471 GO:0003700|GO:0006355
Pste1g00470 257 Gene3D AP2/ERF domain 98 156 IPR036955 GO:0003700|GO:0006355
Pste1g00470 257 MobiDBLite consensus disorder prediction 43 61 - -
Pste1g00470 257 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 54 254 IPR045277 GO:0003700
Pste1g00470 257 SUPERFAMILY DNA-binding domain 98 157 IPR016177 GO:0003677
Pste1g00470 257 CDD AP2 99 157 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00470 Pste-Chr1 1537365 1538138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00470 70 255 AP2-EREBP Transcription Factor Family AT1G12610 46.860 8.37e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste1g00470 AP2 1.2e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00470 1 1537365 1538138 Pste1g00470 1 1537365 1538138 ECH
Pste6g01720 6 7673285 7674475 Pste1g00470 1 1537365 1538138 PCT