Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00468 CAATTGTTGTTTAAGTCAATAGCGCATGCATGACCCACCTTTGTCATTCACCTTAGCTCCTTCATTCATTGCCATTGCCCACAAAGAAAGAAAAGCATAAAATTTGAGACATTAATGTCCCAACGACTTCACTTTAATATAGAGTTCTAGCACAATATCATAAGCATGGCGGAAAGTGACGTGAGTACTCCGTCCTCTTTCAGGCTCCGTTGGGACGTGTTCCTGAGCTTCAGGGGCACGGACACGCGCCACACCTTCACAATCAGTCTCTACCACGCGCTCCAATCCAACGGCATGCGCGTGTTCCGCGACGACGATGGGTTGGAGCGCGGGGAAGAGATCCAGAAGAAACTTCTGGAAGCCATAGAGGACTCAGCGGCCTCAGTGATAGTGTTGTCTCCGGATTACGCGTCTTCTCACTGGTGTCTGGATGAGTTGGCAAAGATTTGGGAGTGTGGAAGGCTAATCCTTCCGGTGTTCTATTGGGTCGACCCTTCTCATGTCAGAAAGCAAAAGGGTCCCTTCGAGGAGCCTTTCGTGTCCCATGCAAAGAGGTTTTCCAAAGACACTCTCCACAAATGGAGGAATGCCATGAACAAAGTCGGTGGACTCGCTGGCTTTGTTTTGCATCAGAACAGTGCCAAGGAGAAAAGTGATGAACTGATTCAGGTTTTGGTGCAAACACTTATGAAGCAAATGAGGAACACACCCTTGCATGTGGCTCCACACACAGTTGGGCTCAACGAGAAAGTTGAAGTGTTGAAAAAGATGTTGGATGTAAAATCCAACGATGTAAGGATTTTGGGGTTGTATGGAATGGGTGGGGTTGGTAAAACAACCCTAGCCAAGAGCCTCTTCAATAGCCTTGTCGTTCATAATTTTGAGCGACGCAGCTTCATTCCAAATATTAGATCACAAAGCTCAAAACACAATGGTTTGCTTTCTCTCCAAAGCACAATTTGTGATGAACTTTCTGGTAGGAAAGAAGACCCAATGATTGATGTTAATGATGGGATTTCTGCCATCGAAAGAATAGTACAACAGAATCGAGTTTTATTGATCTTAGATGATGTTGATAGCATGCAACAACTTAACTATTTGATGGGTAGGAGGGAGTGGTTTTTCAAAGGAAGCCGTGTTGTAATAACCACAAGGGACAGAGAAGTTTTACATGAAAGTTATTGTGATATGCAGTATGAAGTGAAGGAATTGGAATTTAGTCCAGCGATGGAGTTGTTTAGTGATGATAAACTGTGGATGCATGATCAGGTAAGAGACATGGGGAGGCAAATTGTGAATACTGAAAGCATAGAAGATGCTGGTTTACGTAGCAGGCTTTGGGATCGTGATGAAATCTTCACTGTCTTAACGAGTAGCAAGGGAACAAGAAAAGTTCAGGGGATTGTCCTAGATTGTGTTAAGAGAAGATTGTCTACTCCTAGAGATCGCACTGCAGATGAAATTGCATGGGAAAAGTTTCAACGTAAGCCAAATTGTAAATCTGCATTGGAATATGTTAAAGAGAGGTATAAAAGGTATTTGGTTGATAGAGAAGAGAAAGCAAAAGAGGTTATACTTCTGACAAAGCACTTTGAACAAATGGTTTCCTTAAGACTGCTTCAAATTAATTATTCGAGGTTGGAAGGACAATTCAGATACCTTCCCCAAGGGCTGAAGTGGTTACAATGGAAGCAATGTCCACTTAGGTATATGCCTTCAAGCTATCATCCTTTGGAACTTGCTGTCATGGATCTCTCTGAAAGTAAGATTCAAACTCTGTGGGGTGGATACGGTAACAAGGTGGCTAAGCACTTAATTGTTTTAAACCTCTCGAGTTGCCACCATTTGATAGCAACTCCTGATTTAAATGGGTATCTATCGCTTCAAAAAATTATCTTGGAAGAATGCTCCCATTTAACCAGGATTCACGAATCACTTGGAAATCTAAGTTCCTTAGTTCATTTGAACTTGCGTGGCTGCTATGAACTTACTGAGCTACCTTCTGATGTCTCTGGGCTGAAACATCTTGAGGACCTTATTCTTTCTCACTGCTGGAAATTGAAAGCATTACCAAAAGATTTAAGCTGCATGGTTTCTTTAAGACAGCTTCTTCTTGATAGCACTGCTGTAACTGAGCTTCCTGAGTCCATCTTCCACCTCACAAAACTTGAAAATCTGAGTGCAAATGGTTGCCAATCTTTGAAGAGGTTACCAACCTGCATTGGAAAACTCTGCTCCCTGCAGGAATTATCACTCAACCATACAGCAATAGAGGAATTGCCAGATTCAGTTGGTTCTTTGGAAAAACTTGACAAGCTTAGTTTGATGGGATGCAAGTCACTCTCACTGGTTCCTAATTCTATTGGGAAATTAATTTCATTGAATCAATTATTTTTGACTGGAATTATAGAATTGCCTACTTCTATTGGTTCTTTATCATATTTAAGGAAATTGTCTGTAGGAAGCTGTAATTTTCTAGACAAATTGCCTGAGTCAATAGGAGCATTAGTTTCTATTGTTGAGCTTCAGTTAGATAGGATAAAAGTTGCCAACTTGCCAGATCAAATGTTTGTGGCCATGCAAATGCTAGAAAAGCTTGAGATGAGACAATGTCAGCACCTCAGGTTTCTACCAGTGTCATTTGGCTGCCTGTCAGCTCTTACAAGTTTGGACATGTACGAGGCAAACATTACTGAGTTGCCAGAATCAATTGGAATGTTGGAAAATCTCATTTGGTTGAGATTAGACATGTGCAAACAGCTCCAAAGGCTTCCAACTTCCTTTGGAAATTTGAAATCTCTGCGATGGTTAAAGATGAAGGAAACAGCACTTAAAAATCTACCTGACAGCTTTGGGATGCTTACAAGCTTGGTAACCATAGACATGGAAAGAAGGTCATATCTCAATGGGGCTGAAAACATGCCTACTGGGGTTATAGTCCCTGACAAAGAAGAACCCAACTCAGAGTCAATATTAACTTCTTTTTGCAATCTAACCTTGCTGGAAGACTTAAATGCTCATGGATGGGGAATATGTGGAAAGATTCCAGATGACTTTGAAAAACTATCATCATTACAAACTTTAAGTTTAGGTCACAACAATATTTGCTGTCTTCCAGCCAGCATGACTGGTCTCTCCTATCTCAAAAAGCTTTTGTTGTCAGATTGCAGGGAGCTCATGTTTATGCCTCCTCTTCCCTCTAGCCTAGAAGAGCTTAATCTTTCAAACTGTATTGCAGTAAAGTACATACATGATATTTCAAACTTGGAGCACTTAGTGGAGTTGAACCTTACAAATTGTGAAGAGGTGGTAGATATACCAGGTCTTGAACATTTGAAGTCCTTAAGAAGGCTGTACTTGAGTGGTTGTATTAGATGCTCCCTTCCCGTTCTACTTAAAAAATTAGAGATATTGATTATGCCTGGAAGTAGTGTCCCAGATTGGTTTACAGCAGAACCAATTGTCTTTTCCAAGAGAAGAAACCGTGAGCTTAAGAGTATTATTTGTTCAGGTGTTCTCTCTTTCAACAACATACCTGAAAACAGAAGGGAAAGACTGCAGTTAGAGGACGTTCAAGGAAAAATCTTTAATTTGACAGATAATGTATTTAGCACAACTTTTCGCCTACTAGGAGTACCAAGGACAAACGAAGATCACATATTTTTGCGCAGATTTGGAGCTCGGTCTTCGTTAGTTTTCCAGTTAAAAGATAAATATAGTTTACATTTGCAAAGGCGAAACCCACCTGGTGTTGAGGGGCTAGAACTGAAGAACTGCAGAATTCAGTTAGTTTTTGAAGGTGATGATGATTATGAGGGAGAAGAAGGATCACTAGATGAAAGTCAATACTCTGTTTCACAAAAATTAGCCAAGTTCTTCAACTCTGGTGCAGATGAGGCATGTGTGTGAATAAATATGCAAGTTGCATAAACAGGTCAGCACTCACCATGCGTTTTGACTAGTTGAAATGAATGTTTTTGAATAGTTTTAGAACGCCTTGGCAAGAACTATCACGTCATGGACCAATTAGATCATTAAAGATTGCGGCTGGGACACGCCCTGCTATTTGCTTTAGCTGCCCTGCTATTTGCTTTAGCAAACTTTCCG 4107 0.4093 MAESDVSTPSSFRLRWDVFLSFRGTDTRHTFTISLYHALQSNGMRVFRDDDGLERGEEIQKKLLEAIEDSAASVIVLSPDYASSHWCLDELAKIWECGRLILPVFYWVDPSHVRKQKGPFEEPFVSHAKRFSKDTLHKWRNAMNKVGGLAGFVLHQNSAKEKSDELIQVLVQTLMKQMRNTPLHVAPHTVGLNEKVEVLKKMLDVKSNDVRILGLYGMGGVGKTTLAKSLFNSLVVHNFERRSFIPNIRSQSSKHNGLLSLQSTICDELSGRKEDPMIDVNDGISAIERIVQQNRVLLILDDVDSMQQLNYLMGRREWFFKGSRVVITTRDREVLHESYCDMQYEVKELEFSPAMELFSDDKLWMHDQVRDMGRQIVNTESIEDAGLRSRLWDRDEIFTVLTSSKGTRKVQGIVLDCVKRRLSTPRDRTADEIAWEKFQRKPNCKSALEYVKERYKRYLVDREEKAKEVILLTKHFEQMVSLRLLQINYSRLEGQFRYLPQGLKWLQWKQCPLRYMPSSYHPLELAVMDLSESKIQTLWGGYGNKVAKHLIVLNLSSCHHLIATPDLNGYLSLQKIILEECSHLTRIHESLGNLSSLVHLNLRGCYELTELPSDVSGLKHLEDLILSHCWKLKALPKDLSCMVSLRQLLLDSTAVTELPESIFHLTKLENLSANGCQSLKRLPTCIGKLCSLQELSLNHTAIEELPDSVGSLEKLDKLSLMGCKSLSLVPNSIGKLISLNQLFLTGIIELPTSIGSLSYLRKLSVGSCNFLDKLPESIGALVSIVELQLDRIKVANLPDQMFVAMQMLEKLEMRQCQHLRFLPVSFGCLSALTSLDMYEANITELPESIGMLENLIWLRLDMCKQLQRLPTSFGNLKSLRWLKMKETALKNLPDSFGMLTSLVTIDMERRSYLNGAENMPTGVIVPDKEEPNSESILTSFCNLTLLEDLNAHGWGICGKIPDDFEKLSSLQTLSLGHNNICCLPASMTGLSYLKKLLLSDCRELMFMPPLPSSLEELNLSNCIAVKYIHDISNLEHLVELNLTNCEEVVDIPGLEHLKSLRRLYLSGCIRCSLPVLLKKLEILIMPGSSVPDWFTAEPIVFSKRRNRELKSIICSGVLSFNNIPENRRERLQLEDVQGKIFNLTDNVFSTTFRLLGVPRTNEDHIFLRRFGARSSLVFQLKDKYSLHLQRRNPPGVEGLELKNCRIQLVFEGDDDYEGEEGSLDESQYSVSQKLAKFFNSGADEACV 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00468 1247 Gene3D - 175 344 IPR027417 -
Pste1g00468 1247 Pfam TIR domain 16 178 IPR000157 GO:0007165
Pste1g00468 1247 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 359 IPR044974 GO:0006952
Pste1g00468 1247 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 180 - -
Pste1g00468 1247 SMART till_3 15 149 IPR000157 GO:0007165
Pste1g00468 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 359 IPR027417 -
Pste1g00468 1247 SMART LRR_typ_2 876 898 IPR003591 -
Pste1g00468 1247 SMART LRR_typ_2 594 618 IPR003591 -
Pste1g00468 1247 SMART LRR_typ_2 781 804 IPR003591 -
Pste1g00468 1247 SMART LRR_typ_2 829 852 IPR003591 -
Pste1g00468 1247 SMART LRR_typ_2 642 665 IPR003591 -
Pste1g00468 1247 SMART LRR_typ_2 967 990 IPR003591 -
Pste1g00468 1247 SMART LRR_typ_2 689 712 IPR003591 -
Pste1g00468 1247 SUPERFAMILY L domain-like 752 1083 - -
Pste1g00468 1247 Pfam NB-ARC domain 195 378 IPR002182 GO:0043531
Pste1g00468 1247 PRINTS Disease resistance protein signature 710 726 - -
Pste1g00468 1247 PRINTS Disease resistance protein signature 290 304 - -
Pste1g00468 1247 PRINTS Disease resistance protein signature 212 227 - -
Pste1g00468 1247 SUPERFAMILY L domain-like 365 815 - -
Pste1g00468 1247 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 152 IPR035897 -
Pste1g00468 1247 Gene3D - 13 174 IPR035897 -
Pste1g00468 1247 Gene3D Ribonuclease Inhibitor 747 923 IPR032675 -
Pste1g00468 1247 Gene3D Ribonuclease Inhibitor 467 746 IPR032675 -
Pste1g00468 1247 ProSiteProfiles TIR domain profile. 14 178 IPR000157 GO:0007165
Pste1g00468 1247 Gene3D Ribonuclease Inhibitor 929 1146 IPR032675 -
Pste1g00468 1247 SMART AAA_5 209 348 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00468 Pste-Chr1 1532698 1541173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00468 711 921 WRKY Transcription Factor Family AT4G12020 29.870 1.68e-07 54.3