Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00435 CGCACTTTGCGTATCAAAGTCCAACACCTTCTCTCTCCTCAGTAGTTAAACTGCGTTGACTGCGATAAATCCCACACTTTATTTATTTCTTTCCTTTTTTTTCCCCTTTCCCCTCTCTTTATTAACACACACCATTCGCCGGAAAATCTCTCCGATCACCTGCCGTTATTATTTCCATTGGCTTTTCGCACGCAGTAAAACTTGTATGTTATCGCATAGCTAGGGTTCTGGAAACCCTAGCCGTCAATGAGTCTGGGGCAAACCTTACTGGAGTTATTTAGATTCAGCTGGTTGAGATAAACAACGCCGTTTCCTCTGCGTGTTGCGGATTTTTCAATATGAAGAGATTGAGGTCGAGCGAGGATCTCCACTCCTACGGGGGCGACAAGAGTAATGCTTGCAAGGATTCGAGTAATCTGAACCGTTCGTTTTCGTCGGCGCAGCGGAGCTTCTACTACAAGCCGGAGAATCCGCGCAAGGGTTTGGTGTCTTCGTCGTCGCGCTACGAGAGGGATCGGACGGTCGAGGAGGATCGAGAGGGTTCACGGTTGGTTCGGAAGCGATCAGAGCACGATTTCGAGGGTTTTGATCGGAGGAAGGGGTTCGATCGGTACAGGGAGAGTGACAGGAGCTTGATTCACCGGTCGGAGAGTTTCTGCAGCGGTGGTTCCCGGAGGGATCAGTTTCCGAAGGGGTTTCGGTCGGAGAGGGAGCGGTCGCGGAGGGAGGGTAGCGTGTCTTCGTGGCGGAGAGGGTTGAAGGATTTGGATGAGAGGGAGAGGGAGAGGGAGAGGGTGGTGCGTTCGCCTAAGGGTTTGAGAGATGTGAAGTCTCCATCGTGGTCTAAGGATTCTGTTTCTGAGAGCGAGCAATCGAAAAAGAGATCTTCTTCCCCGAGACCCTTCAAAGATGGTAACTCCAACAAGTCTAAGTCCAAGTCTCCTACGTGGTCCAAGGATTCTGAGAGCGAGCAGTCCAAGAGTGTTGAGGTGAAGAAAACTGAGGAGGAGTTGTTGTTGCAGGTTCAGAGCGGGAGTAGCAGTGAGATGGAGGAAGGGGAGCTTGAGCCTGAACCCCAAAGCGAAAAGGTTCCTCCTCTCACTGAACAGTTGCCCTCGGAGACCCAGGAGAGGAATGAATGCCACCCGAATGGTGATGACACTGATACTGCTGTGGATGAGAGGCAGGAGTTGTCGACTAAGGAAGAAGTGAAACCTAATGAGTTGGTTAGTTGTTGTGATATAAAGGATGGGGATAAAGTTGCTGATGATCTGCCAGATGTTCGGGATGATCCGACTCAGAAAATGCCTGTCATGGAGACCGAAGTTGGATCCGTGGGTAATGGTGATGATGATAATAAAGAGGGTTTGGATGCTGGTGCTGAGCGCCAGGAGGAAACAAAGAAGGCTGCGTTTGTGGAGAAGGAGAAGGTAGCGATGAATGAAGAGGAGGATAAGCAGGATGAGGACGAGGGTGTAGATCTAGGAACCAGCATGGATGTTGTCAAACCTGAGTTAAATGATGGAGTATCTACAGGAAGTGAAGTTCCCAAGGAAATGATGATGGAGAGTGTGGTCAACAGTGCAAAGGATAAAGGCAAAGGCGTCTCTGTTGCAGATGCACCTCCTACTGATGTTGCTAATTTTTCAGATGAAGGGTTGTGGATGGATAGAGGGTCTAGAGACCTCCCTACGTGTTCTGTTGATGCTATAGAAGGTCCAAGTACAAAGGGGTTTGAATTATTTTCCAGATCTCCTGTTAGAAAAGTGGAGAAAATAGACTACTCAGTTCTCAACAAGCCCAAGGATGACTTGGAGCAGCTTGATCTTACTCTTAGCTTGCCAAATGTTCTGTTACCTATTGGTGCTCATGAGACAACATCGCAAGCCCCTGGATCCCCCAGTCAGGCACGGAGTGTGCAGTCTTTAAGCAATACATTTTGTACTAACTCAGATGGTTTTACTGCATCAATGTCCTTTTCAGGTTCTCAATCATTCTATCACAATCCAAGCTGTTCTCTGTCAACAAAAAATTCAGTAGACTATGAACAATCTGTTGGCAGTCGCCCATTATTCCAGGGAATAGATCAAGTTTCCCAGGGATGTTGGCAAGGTCAGTCTCAGGGTGATCGCAAACAGAAAGAAGTTCCTTTTGGTCAGAGAACTTCTGTGAATGGAAATGGCTCCCTTTTCCAGTCTCAAGCATCATGGGGCGCTTTAGACAGTCAAGCTGTGAAGGGTCAGCATTCCAGGGTTTTAGAAGGAAATTCAAAAATGGGCAGTGGACTTGACAGGCAATTGAGTTTTCATAGGCAGTTTTCAGGGCAGTCAAGACGGCTTGATGATGTTAGATCCCCGTCACAAAGTGTTGGATCTCATGATATTGGAATTGGATCAAATTATAGCTTTGAGAAAAAGAGGGAGGTAAGAGACAGGAATAGTGGTAGTCTTTATCGAACTACCAGCCCAAAGGAACAAGAACAACTTCTGTTGGGTGGAGTTGATTTTGTTGAAACAATTATTGCAAGAATTGTTTCTGAACCTGTTCATGCAATGTCCAGAAAATTTCATGAAATGACTGCACAGTCTATAGTATGTCTGAAAGAGGGTATTCGTGAAATCATGCTTAATGCAGATAAGCATGGGCAGATACTTGCATTTCAAAAAGTTCTGCAGAACAGGTTTGATATAATCTTGGATGTCCTATTGAAGTGCCACCGAGTGCAACTGGAAATTTTGGTTGCTTTAAAAACTGGCTTAACTCATTTTCTTCATCTAGACAGCAGTATTTCATCTTCTGAGTTGGCTCAAATTTTTCTAAACTTAAGGTGTAAGAATCTTTCATGTCGAAGTCAGTTGCCTGTGGACGAATGTGATTGCAAGGTTTGCGCACAAAAGAATGGTTTTTGTAGGGAATGTATGTGCCTTGTGTGTTCAAAGTTTGACAATGCCTCAAATACATGTAGTTGGGTTGGATGTGATGTCTGCCTTCATTGGTGCCATACTGACTGTGGATTACGGGAATCTTATATTAGAAATGGGCATGGGACAAAAGGGATGACTGAGATGCAGTTTCACTGTATTGCTTGCGATCATCCTTCTGAGATGTTTGGCTTTGTCAAGGAGGTGTTTCTAAATTTTGCACAAGAATGGTCAGTCGAAATCGTTTGCAAAGAGCTTGAATATGTAAAGAGAATTTTTTCTGCCAGCAAGGATATGAGAGGGAGACAACTGAATGAGATTGCGGAGCAAATGCTGTCAAGGTTGGCAAATAAGTCTAATCTGCCTGAGGTTTTGAGGCACATCATGTCTTTCCTTTCCGATGGTGATTCTTCCAAATTAGCAATGACAAAAAACTTTTCTGGGAAGGAACAAATTAAAGAAAACAATGGAGTTGCTGGGCCCAGCCAGGAGGCAGCTTGGATGAAATCTATTTATTCAGAAAAAGCACCTCTGTTAGAAAGGCCTGCAAATATACTTCCTACCTTTGATCAGAATGATAAAAGAACTCTTGCACAAGAATTGCATATGAGTAGTAGTATCCAGAAGGACCTCTGTTTTGATGAGTTGGAGAGTATAGTAAAAATTAAACTGGCTGAGGCTAAAATGTTTCAATCACGTGCTGATGATGCTAGAAGAGAAGCTGAAGGGTTGAAGCGCATTGCCCTAGCGAAGAATGAGAAAATTGAGGAAGAATATACCAATCGAATTGCCAAGTTGCGATTGACTGAGACTCATGAAATTCGTAAACAAAAATTTGAAGAAGCCGAAGCATTAGAGAGGGCACATCTGGAGTATTTGGACATGAAAAGGAGAATGGAGACAGACATTAAAAATCTGTTATCCAAAATGGAAGCTACCAAAATGAGCCTTGCCATATAAAAACAAATCTAGAATAGTACCTTCAGGTAAATGTATTATCTCCAATCCTGAAATTTGTAGGTTCTGGAGGCACCGACTTATTGTTGTGAGCTGCTTTAGTCCTGATCCGTAGTTGTAACTATTTGTTGTTGTAGTTCATTTTGTTTTTAAGCTGCTAACCAAAACCTGTAGAGTTCATCACAGCAGTTACTAGTCTTATGAAACAATATCAGTTATGAAAGCAATCTAAATAGATTATCATCCAAACACATTTGCAACAACACCCAGAGTGTGGATGGATTTGCTGTACAGGCTCTTTTGTACTGACTGTCAGCAGATAGAGATTATAAAATTTCTAAGATTGGTGGCTGTTGTACTTAGAACTTCGCTATCAAGTCACGACTTAACTATTCTTGAATTTAATCAAATGAG 4292 0.4373 MKRLRSSEDLHSYGGDKSNACKDSSNLNRSFSSAQRSFYYKPENPRKGLVSSSSRYERDRTVEEDREGSRLVRKRSEHDFEGFDRRKGFDRYRESDRSLIHRSESFCSGGSRRDQFPKGFRSERERSRREGSVSSWRRGLKDLDERERERERVVRSPKGLRDVKSPSWSKDSVSESEQSKKRSSSPRPFKDGNSNKSKSKSPTWSKDSESEQSKSVEVKKTEEELLLQVQSGSSSEMEEGELEPEPQSEKVPPLTEQLPSETQERNECHPNGDDTDTAVDERQELSTKEEVKPNELVSCCDIKDGDKVADDLPDVRDDPTQKMPVMETEVGSVGNGDDDNKEGLDAGAERQEETKKAAFVEKEKVAMNEEEDKQDEDEGVDLGTSMDVVKPELNDGVSTGSEVPKEMMMESVVNSAKDKGKGVSVADAPPTDVANFSDEGLWMDRGSRDLPTCSVDAIEGPSTKGFELFSRSPVRKVEKIDYSVLNKPKDDLEQLDLTLSLPNVLLPIGAHETTSQAPGSPSQARSVQSLSNTFCTNSDGFTASMSFSGSQSFYHNPSCSLSTKNSVDYEQSVGSRPLFQGIDQVSQGCWQGQSQGDRKQKEVPFGQRTSVNGNGSLFQSQASWGALDSQAVKGQHSRVLEGNSKMGSGLDRQLSFHRQFSGQSRRLDDVRSPSQSVGSHDIGIGSNYSFEKKREVRDRNSGSLYRTTSPKEQEQLLLGGVDFVETIIARIVSEPVHAMSRKFHEMTAQSIVCLKEGIREIMLNADKHGQILAFQKVLQNRFDIILDVLLKCHRVQLEILVALKTGLTHFLHLDSSISSSELAQIFLNLRCKNLSCRSQLPVDECDCKVCAQKNGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHGTKGMTEMQFHCIACDHPSEMFGFVKEVFLNFAQEWSVEIVCKELEYVKRIFSASKDMRGRQLNEIAEQMLSRLANKSNLPEVLRHIMSFLSDGDSSKLAMTKNFSGKEQIKENNGVAGPSQEAAWMKSIYSEKAPLLERPANILPTFDQNDKRTLAQELHMSSSIQKDLCFDELESIVKIKLAEAKMFQSRADDARREAEGLKRIALAKNEKIEEEYTNRIAKLRLTETHEIRKQKFEEAEALERAHLEYLDMKRRMETDIKNLLSKMEATKMSLAI 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00435 1180 MobiDBLite consensus disorder prediction 661 685 - -
Pste1g00435 1180 CDD PHD_OBE1_like 861 917 IPR047578 -
Pste1g00435 1180 MobiDBLite consensus disorder prediction 661 683 - -
Pste1g00435 1180 Pfam PHD - plant homeodomain finger protein 831 951 IPR032881 -
Pste1g00435 1180 MobiDBLite consensus disorder prediction 116 159 - -
Pste1g00435 1180 MobiDBLite consensus disorder prediction 262 323 - -
Pste1g00435 1180 MobiDBLite consensus disorder prediction 334 369 - -
Pste1g00435 1180 MobiDBLite consensus disorder prediction 202 224 - -
Pste1g00435 1180 Coils Coil 350 370 - -
Pste1g00435 1180 Coils Coil 1088 1119 - -
Pste1g00435 1180 MobiDBLite consensus disorder prediction 18 39 - -
Pste1g00435 1180 MobiDBLite consensus disorder prediction 52 77 - -
Pste1g00435 1180 MobiDBLite consensus disorder prediction 100 385 - -
Pste1g00435 1180 MobiDBLite consensus disorder prediction 1 16 - -
Pste1g00435 1180 MobiDBLite consensus disorder prediction 1 77 - -
Pste1g00435 1180 Pfam Coiled-coil region of Oberon 1051 1168 IPR032535 -
Pste1g00435 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 822 843 IPR004082 -
Pste1g00435 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 742 764 IPR004082 -
Pste1g00435 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 796 811 IPR004082 -
Pste1g00435 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1075 1095 IPR004082 -
Pste1g00435 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 781 796 IPR004082 -
Pste1g00435 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1114 1136 IPR004082 -
Pste1g00435 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 938 957 IPR004082 -
Pste1g00435 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 868 888 IPR004082 -
Pste1g00435 1180 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1177 IPR004082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00435 Pste-Chr1 1451158 1457525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00435 831 976 PHD Gene Family AT5G57380 26.712 2.69e-13 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00435 1 1451158 1457525 Pste1g00435 1 1451158 1457525 ECH