Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00432 CAAACACAAACACATAAACCCTACCCTCTATATATCACCCAAACCTCCCAAAGTCTCTTTCTCTTTCTCTCTATCAGAAACAAAAACTCAACACCCCCTCCCCACCCTCTTCTCATTAATTTCCTCAATCATACAGACTCTAGACTGGTATATCTATCTTGTTTCTTATTCATTGCATGGACTGTTGAGATGTCTCGCACGTGTTCACAGTGTGGAAACAACGGCCACAACTCACGCACATGCTCCGACGGTGCCTCCGCCGCATCCGGCGGCGTGTCCCCCCGGGAGAACGCCATCATGCTGTTCGGCGTGCGAGTCACCACCGAACCTAACTCCTCCTTCCGGAAGAGCGCTAGCATGAACAATCTTTCGCAGTACGATGCCGACTCCAACGCTGCCGACGCCGGCTACGCCTCCGATGATGTTGTTCACGCCTCCGGCCGCACGCGCGAGCGCAAACGAGGTGTTCCTTGGACGGAGGAAGAGCATAGATTGTTTCTATTAGGGTTGCACAAAGTTGGAAAAGGAGACTGGAGAGGAATTTCTAGAAACTTTGTGAAGACTCGAACGCCAACGCAAGTTGCAAGTCACGCTCAGAAGTACTTTCTCCGCCGCCACAATCAGAATCGCCGTCGCCGGAGATCTAGCCTCTTCGACATCACCACCGATACGGTGATGGAATCTTCTACAATAATGGAAGAAGAACAAATTCAGCAAGAAACGGTGGCGGCGCCTCTTCCCGCCGCATATCCGCCGTCGCATTATGGAGCCTTTCCCGGAGTGGGTTTTCCGATGAGTTTGTCTCCGGTGGCGTTGCCGGTGAGTGGTGATAGGCTAGCCAAGCCGATCAGGCCGACGCCGATTTTGCCGGTGCCTCCGTCTTCGAAGATGGCGAACTTAAACCTGAAAGAGAAAGCTTCTCCGACAAATCACATTGAGCCTTTACCATTGTCGTTGAATCTGCCACCACCACCACCGTCGTCATCGCAGGATCGGTCTCCGGCAAGCAGTGGCCACTCGTCACCGTCGTCGTCGTCATCGGCGGCGGCTTTTCAGGCCATGTCTGCAGGAAAGTTCGGCGGCGGCGGGGATAGCATCATCAGCGTTGCTTGAAAAGAAGAAAACGGGAAAAAAAAATAGTGTCATTGAGTTATTAATTAAGTATGATCTTAGTTAATTTGAGTATGTAAATGTTATAAAATGGAACATGTATCCAAGAGGGAAAAATAGAGATATGTGTTGGAGATTTATTTATTAAGAAAACTATATAGTAGGTAGGAGTGGGGGTATTTGAATTAATGAGTAAAGTATGATGGTAATTATTAAAATAAATACTCCGCTATTGTTAGGTTAATTAAGTAATTAGTCAATTTAATTGCTGGATTTTATGTACAGGTTTAGAAATTAGAATTAAATCAGAAAGATGGGTTGTCATATTCTCTAGCCGTCGGGGGATTCTTGTTTTTATTTGTATGGGAGAGTGTGACCGTGAAATGATAGGGCACGAGTACTCTTGATATGTGATTGGTCTGTGTTTTATTTCCACTGGGGTCTATAAAATATTGGCTTAGATTAGACAAAGGAATATATTATGCTCACCTTTGATTTCTTGTTCATA 1618 0.4642 MSRTCSQCGNNGHNSRTCSDGASAASGGVSPRENAIMLFGVRVTTEPNSSFRKSASMNNLSQYDADSNAADAGYASDDVVHASGRTRERKRGVPWTEEEHRLFLLGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESSTIMEEEQIQQETVAAPLPAAYPPSHYGAFPGVGFPMSLSPVALPVSGDRLAKPIRPTPILPVPPSSKMANLNLKEKASPTNHIEPLPLSLNLPPPPPSSSQDRSPASSGHSSPSSSSSAAAFQAMSAGKFGGGGDSIISVA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00432 307 ProSiteProfiles Myb-like domain profile. 87 139 IPR001005 -
Pste1g00432 307 NCBIfam myb-like DNA-binding domain, SHAQKYF class 90 141 IPR006447 GO:0003677
Pste1g00432 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 143 IPR017930 -
Pste1g00432 307 MobiDBLite consensus disorder prediction 1 29 - -
Pste1g00432 307 SUPERFAMILY Homeodomain-like 89 142 IPR009057 -
Pste1g00432 307 CDD SANT 94 139 IPR001005 -
Pste1g00432 307 ProSiteProfiles SANT domain profile. 90 143 IPR017884 -
Pste1g00432 307 MobiDBLite consensus disorder prediction 244 287 - -
Pste1g00432 307 MobiDBLite consensus disorder prediction 1 24 - -
Pste1g00432 307 PANTHER TRANSCRIPTION FACTOR KUA1 1 263 - -
Pste1g00432 307 FunFam transcription factor MYB1R1 93 144 - -
Pste1g00432 307 MobiDBLite consensus disorder prediction 268 287 - -
Pste1g00432 307 Pfam Myb-like DNA-binding domain 94 139 IPR001005 -
Pste1g00432 307 Gene3D - 93 144 - -
Pste1g00432 307 ProSiteProfiles Zinc finger CCHC-type profile. 5 18 IPR001878 GO:0003676|GO:0008270
Pste1g00432 307 SMART sant 91 141 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00432 Pste-Chr1 1434644 1436746 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste1g00432 Myb_DNA-binding 3.7e-11 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00432 1 1434644 1436746 Pste1g00432 1 1434644 1436746 ECH
Pste1g00432 1 1434644 1436746 Pste7g00795 7 7349202 7349832 PCT