Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00425 GATTCAAACTCACCATGCCATTTCCTCATAACCAAAAATTTTTCAAGAGGTTCTGTGTGGATGAACTCCACATGGCAGGTCTTCCATATAGCAGCTTTTTGTCCAATGATCTCTTGCCATCCCTTGGAGCCAGAATCAACCAAGAAACAAGACTTAGAAGATACATAATTTCCCCTTTCAATTCCCTTGTTTACTATGCATGGATTTGCCCCTTTGAGTTTGCCTTTCTGACTTACAAGCAAGACACACTATTCATCATAGACAACATTGTCAATACCTTCTTTGCCATAGACATCATTCTCACATTCTTTGTTGCATATCTTGATAACCATTCCTACCTCCTTGTTGATGATCCCAAGAAAATTGCAATAAGGTACATATCTACCTGGTTTATCTTTGATGTCTGCTCAACTGCACCATTTCAATCCTTCACCCTTCTCTTCACTAATCACAGCAGTGAGATAGGGTTCAAAGTTCTCAACATGCTCAGGTTGTGGCGCCTGAGACGTGTCAGTTCTCTGTTTGCAAGGTCCAACATTATACTATATACTCAACCTTATGGTTTTCCAACACTTGAAACTGAAACTCCTCTGGTTTCCTTTAGACTTGAGAAGGATATTCGCTTCAATTACTTCTGGACTAGGTGCTCCAAGCTCATTGCTGTGACCTTGTTTGCTGTGCACTGTGCTGGATGCTTCAACTATCTGATTGCAGATAGGTACCCTGATGCCAAATCAACATGGATTGGTTCTGTGTACCCAAACTTCAAAGAAATGAGTCTTTGGGATAGATATGTCACTGCCATGTATTGGTCCATTGTGACACTTACTACCACTGGCTATGGAGACTTGCATGCTGAAAACACAAGAGAGATGTTGTTTGACATATTCTACATGTTGTTCAACTTGGGATTAACCTCATACATCATTGGAAACATGACAAACCTTGTGGTCCACTGGACTAGCCGCACCAGAAATTTTACAGAAGGACTGAAGCAACAAGAAACACTAAATGGCATGCCAAAGGCAATTCGTGCAAGCATTGCATACCATCTTTTTTTCCCACTTGTGCAGAAGGTTTACATCTTTCAAGGAGTCTCACATGACTTTCTTTTCCAACTGGTTACAGAGATGGAAGCAGAGTATTTCCCACCAAAGGAAGATGTTATACTGCAAAATGAGTCTCCCACAGACCTATACATGCTGGATCTCATTCGCTTTGTTGATGGTCATGATCAAGTTATTTCAGGAGAGACATTTGGGGAGATTGGAGTGTTATACTATAGACCGCAACCTTTCACTGTCAGGACTACTGAGCTTTCTCAAATTTTAAGACTCAGCAGAACTTCCTTGATGAATTCCTTACATGCATATCCAGATGCAGCACAAATTATAATGAAAAATATCTTCATGAAGTTAAAGGGACATGAAGGATTGGATTCTGAATATCCACCTACTATGGACCCTGGATTGGCCCTTTACCAAATGTATGATTGGGATAACATAGGAGCAAGTTTCTCTGATGCATCCTCAAACAACTCACATGGGGAAGCCAGATTGCATAGCTTGATTCCTGAGGATGGCCAAAGAGATTCTCTTGCTACTTTGCACCAACGTCACCCTGACATGGAAGCAAATGAAAAGAACCAAAACCCTATAAGATGGAAACAAAAGCCTGTAGTGGAGCAGCAACAGAACAAGAGCATTATTTCTAGCCTTGCAATGAACCATGACAATAGGAAGACATTAGATGAACATATTATAGAGTTTTTGGAACCAGAAATCCCTATTAACTACCCTTTAGGAAAAGTATACACAAACTCTTATACAGGAGAAAAGTTTGGAGGCTCAAAACCTACAAAAGTAATTAGTACAGAGAACGCAGAGATAGATGATATTAGTGTGATTCGAGATGGAGATCATCTTTTCTTCAGTTGTATTGACACTTAAAATTTTGGTTCATAATCTTATCAAGAGTTGGTCACATCATGGAAGATATGAAGCTAATTTGTAACCTTCATGAAGATAAAATAATAGTAATAAGTAATATACAAAAGCACACACAGATTATAGAAAAAGTCAAATTGTCAATGGAGATGGAGATGGTGATCATCTTACCAACTTTTTTTTGGAAATACTAAAAATTTGTGTCAATGATTTTACCAGATTCAATAAAGTTGTGAC 2183 0.3894 MPFPHNQKFFKRFCVDELHMAGLPYSSFLSNDLLPSLGARINQETRLRRYIISPFNSLVYYAWICPFEFAFLTYKQDTLFIIDNIVNTFFAIDIILTFFVAYLDNHSYLLVDDPKKIAIRYISTWFIFDVCSTAPFQSFTLLFTNHSSEIGFKVLNMLRLWRLRRVSSLFARSNIILYTQPYGFPTLETETPLVSFRLEKDIRFNYFWTRCSKLIAVTLFAVHCAGCFNYLIADRYPDAKSTWIGSVYPNFKEMSLWDRYVTAMYWSIVTLTTTGYGDLHAENTREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFTEGLKQQETLNGMPKAIRASIAYHLFFPLVQKVYIFQGVSHDFLFQLVTEMEAEYFPPKEDVILQNESPTDLYMLDLIRFVDGHDQVISGETFGEIGVLYYRPQPFTVRTTELSQILRLSRTSLMNSLHAYPDAAQIIMKNIFMKLKGHEGLDSEYPPTMDPGLALYQMYDWDNIGASFSDASSNNSHGEARLHSLIPEDGQRDSLATLHQRHPDMEANEKNQNPIRWKQKPVVEQQQNKSIISSLAMNHDNRKTLDEHIIEFLEPEIPINYPLGKVYTNSYTGEKFGGSKPTKVISTENAEIDDISVIRDGDHLFFSCIDT 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00425 644 Gene3D - 50 313 - -
Pste1g00425 644 PRINTS EAG/ELK/ERG potassium channel family signature 260 277 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste1g00425 644 PRINTS EAG/ELK/ERG potassium channel family signature 83 93 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste1g00425 644 PRINTS EAG/ELK/ERG potassium channel family signature 286 297 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste1g00425 644 PRINTS EAG/ELK/ERG potassium channel family signature 94 103 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste1g00425 644 PRINTS EAG/ELK/ERG potassium channel family signature 304 313 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste1g00425 644 SMART cnmp_10 357 465 IPR000595 -
Pste1g00425 644 SUPERFAMILY Voltage-gated potassium channels 59 313 - -
Pste1g00425 644 PANTHER POTASSIUM CHANNEL AKT1 26 322 IPR045319 GO:0005249|GO:0006813
Pste1g00425 644 Pfam Ion transport protein 199 319 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste1g00425 644 Pfam Ion transport protein 58 174 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste1g00425 644 FunFam Potassium channel KAT2 345 472 - -
Pste1g00425 644 ProSiteProfiles KHA domain profile. 565 644 IPR021789 -
Pste1g00425 644 SUPERFAMILY cAMP-binding domain-like 312 464 IPR018490 -
Pste1g00425 644 Pfam KHA, dimerisation domain of potassium ion channel 606 639 IPR021789 -
Pste1g00425 644 ProSiteProfiles cAMP/cGMP binding motif profile. 357 467 IPR000595 -
Pste1g00425 644 CDD CAP_ED 357 461 IPR000595 -
Pste1g00425 644 Gene3D Jelly Rolls 325 474 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00425 Pste-Chr1 1421279 1430211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00425 1 640 Ion Channels AT5G46240 53.638 0.0 719