Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00424 ATGGAAGAAGTTCAAGAGTCTCAAACCCAACTGTCTTTCGGTCAAGAAGATGAAAATGAAGTGATTGCTGAAAGTTCGGCATTTGTTAAGGGGGAAGCTGCAGAAGAATTCAGTAGTAGCCCCCCAAAAGTTGATTCCGAAGCTGAGGTCCTTCACGAGAAGGTCACCAAACAAATCATTAAGGAAGGCCATGGCCTGAAACCTTCCAAATATTCAACTTGTTTCTTCCATTACAGGGCGTGGTCTGAGAAAACACAGCACAAGTTTGAAGACACATGGCAGGAGCAAAGGCCAATTGAGATGGTCTTAGGAAAAGAGAAGAAAGAGATGACTGGTTTGGGCATTGGTGTGGCAAGCATGAAAGCTGGGGAGCGTGCATTGGTGCGTGTAGGCTGGGAGTTAGGATATGGAGAGGAAGGAAGCTTCTCTTTTCCAAATGTTCCACCTATGGCTGATTTAGTTTATGAAGTTGAGCTCATTGGCTTTGATGAAACAAAAGAAGGGAAAGCACGCAGCGATATGACTGTGGAGGAAAGGATTGGTGCAGCAGACCGGAGAAAGATGGATGGAAATGCTTTGTATCAGGAAGAAAAACTAGAGGAGGCTATGCAACAGTATGAAATGGCCATAGCATATATGGGAGATGACTTCATGTTTCAGTTGTTTGGGAAGTATAGAGATATGGCTCTGGCTGTAAAGAATCCATGCCATCTTAACATGGCAGCCTGTTTGATTAAGCTAAACCGCAATGAAGAAGCTATAGGACAATGCAGCATTGTACTGGGTGAGGATGAGAACAATGTGAAGGCATTATTTAGGCGAGGTAAGGCTAGAGCAGCACTTGGGCAGACAGATGCTGCCAGGGAAGATTTTCTGAAGGCACGCAAATATGCCCCTGAAGATAAAGCAATTGCAAGAGAATTGAGATTGCTTGCTGAACATGACAAGGCTGTTTACCAAAAGCAGAAAGAAATATATAAAGGAATATTTGGACCAAGGCCTCAGCCAGTACCTAAGCGAAGAAATTGGCTCCTAGTTATTTGGCAGTGGTTGCTTTCAGTTTTCTATGGCCTTGTCACGCTCTTCAAGCGCGGAAGACATAAATCTGACTGA 1113 0.4412 MEEVQESQTQLSFGQEDENEVIAESSAFVKGEAAEEFSSSPPKVDSEAEVLHEKVTKQIIKEGHGLKPSKYSTCFFHYRAWSEKTQHKFEDTWQEQRPIEMVLGKEKKEMTGLGIGVASMKAGERALVRVGWELGYGEEGSFSFPNVPPMADLVYEVELIGFDETKEGKARSDMTVEERIGAADRRKMDGNALYQEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRNEEAIGQCSIVLGEDENNVKALFRRGKARAALGQTDAAREDFLKARKYAPEDKAIARELRLLAEHDKAVYQKQKEIYKGIFGPRPQPVPKRRNWLLVIWQWLLSVFYGLVTLFKRGRHKSD 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00424 370 FunFam Peptidylprolyl isomerase 168 296 - -
Pste1g00424 370 SUPERFAMILY TPR-like 175 325 IPR011990 GO:0005515
Pste1g00424 370 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 68 160 IPR001179 GO:0003755
Pste1g00424 370 Gene3D Tetratricopeptide repeat domain 165 296 IPR011990 GO:0005515
Pste1g00424 370 Gene3D - 39 164 IPR046357 GO:0003755
Pste1g00424 370 SMART tpr_5 268 301 IPR019734 GO:0005515
Pste1g00424 370 SMART tpr_5 183 216 IPR019734 GO:0005515
Pste1g00424 370 SMART tpr_5 234 267 IPR019734 GO:0005515
Pste1g00424 370 ProSiteProfiles TPR repeat profile. 268 301 IPR019734 GO:0005515
Pste1g00424 370 SUPERFAMILY FKBP-like 37 162 - -
Pste1g00424 370 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 71 163 IPR001179 GO:0003755
Pste1g00424 370 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 98 339 IPR039663 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00424 54 330 Calmodulin-binding Proteins AT3G25230 31.786 4.83e-28 113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00424 1 1419179 1422365 Pste1g00424 1 1419179 1422365 ECH