Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00413 TGCTTTTGTCCTTGTATATACTTTCTTAAGAGAAAAAAAATACGGAAAAGACAACTATACCCTTTTTTCTGTTGACAAAACACTGCTCTTCTATCATTAGGATTACCTCCAAAACAAGGGGTAGTCACAGAAACTCATAAACAAGACGACACCATTTCTTTTCCTGCTTAACTGCCTTTTGTTTTGGTTTTACTTCCACCTCATATTTTATATGTGTTCCAAACTTGTTCTTGGAATGTATTCACCATAATAACCCTCAAACAAAAAGCCACCTTAACATCTCTGCTCTGAAAATTCTCTTTCTGGGGATAGAGAGAATGGCAGCTTGCACTGTCTACTCAACACAATCTTTGAGCACAATCCCAACCCCATCAAAAACACAATTGAGTTTCCACCAAAAGCAGGTAGTTTTCTACACCACAAGCAGAAGGAACAGCAAGAGGGGCAACCACAGTGGCAGAAGCTATGTGATAACATGTGCAGCAGGTGACTCACAGACAGTGGTGATTGGTCTTGCTGCAGACTCAGGGTGTGGGAAGAGTACCTTCATGAGGAGGCTGACCAGTGTGTTTGGAGGAGCAGCAGAACCACCAAAGGGTGGGAACCCTGATTCCAACACTCTCATCAGTGACACCACCACAGTCATATGCTTGGATGATTACCATTCATTGGATAGAACTGGCAGAAAGGAGAAGGGTGTCACTGCTCTTGACCCGAGAGCCAACGATTTTGATCTCATGTACGACCAAGTTAAAGCTCTAAAGGACGGAATTTCTGTCCAAAAACCAATTTATAACCATGTCACTGGTCTCTTGGATCCCCCTGAGCTAATTAAACCTCCCAAAATCTTGGTCATTGAAGGTTTGCATCCAATGTTTGATTCCCGTGTCAGAGAACTCTTGGACTTTAGCATCTACCTAGACATTAGCAATGAGGTTAAATTCGCCTGGAAAATTCAGAGAGATATGGCAGAACGTGGACACAGTCTTGAAAGCATCAAGGCTAGTATCGAAGCAAGGAAGCCTGATTTTGAAGCATATATTGGTAATCAACTTGGTGTTGACAGATCCACAAAAGCAATACGCAGATGCAGTGATAGAAGTGTTGCCAACCCAACTCATTCAAATGACAACGAGGGTAAGATTTTAAGAGTGAGGTTGATACAGAAAGAGGGAGTTAAGTACTTTAGTCCAGTTTACTTGTTTGATGAGGGATCTACCATTTCCTGGATACCATGTGGAAGGAAGCTTACATGCTCCTACCCTGGCATCAAATTCTTCTATGGACCAGAGACTTACTACGGAAATGAGGTGTCAGTTGTAGAAATGGATGGACAATTTGACAGACTAGATGAACTAATATACGTTGAGAGCCACCTAAGCAACCTCTCAACCAAGTTCTATGGAGAGGTTACTCAACAGATGTTGAAGCATGCTGATTTCCCAGGAAGCAACAATGGGACAGGTCTCTTCCAAACCATAATTGGTTTAAAAATAAGAGATCTATATGAACAGCTTATAGCCAGCAAGGCTGAGACTCCAGTAGCTGCAAAAGCTTAGGAACCTGCCATATATATATAATACATATTGAGCAAGGCAGAGGCAGCCATTGAATTCTCAAAATCATTTTCTTCTTTCAATGTTTTCCACTGTATTTCATGTTATTTTGTCTATTATTAGGCTGCTCTGCATGATCATAATCAAAAACACTATATGTATGTATGTATGTACTTATCCGAGAAGAAAAAGCGAGGCTGAGATTCAATTATGTTGATACAAGAGTGAGACAATTGGCTTCTCTTTCTCTAGCGTTATCCATATAATCTGGCATCACACATATACTAACCATAAATATTTTGTATCATCTTTGTGTGTGTGTGTTTTAAATCAAAGGAACAATCTTTATACTGTAATAACAACAAAATTTATC 1929 0.4012 MAACTVYSTQSLSTIPTPSKTQLSFHQKQVVFYTTSRRNSKRGNHSGRSYVITCAAGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYDQVKALKDGISVQKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDSRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAYIGNQLGVDRSTKAIRRCSDRSVANPTHSNDNEGKILRVRLIQKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPETYYGNEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIIGLKIRDLYEQLIASKAETPVAAKA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00413 413 CDD PRK 63 359 - -
Pste1g00413 413 FunFam Phosphoribulokinase 58 295 - -
Pste1g00413 413 Pfam Phosphoribulokinase / Uridine kinase family 63 246 IPR006083 GO:0005524|GO:0016301
Pste1g00413 413 PANTHER URIDINE KINASE 56 251 - -
Pste1g00413 413 Gene3D - 58 291 IPR027417 -
Pste1g00413 413 ProSitePatterns Phosphoribulokinase signature. 212 225 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pste1g00413 413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 339 IPR027417 -
Pste1g00413 413 PRINTS Phosphoribulokinase family signature 230 253 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pste1g00413 413 PRINTS Phosphoribulokinase family signature 177 195 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pste1g00413 413 PRINTS Phosphoribulokinase family signature 212 229 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pste1g00413 413 PRINTS Phosphoribulokinase family signature 68 85 IPR006082 GO:0005524|GO:0005975|GO:0008974
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00413 115 296 PRT Gene Family AT3G27440 25.405 4.89e-11 62.4