Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00391 ATGACTCCAAACGTAAACTGCCACATGTCCCTCACTCACCCTCATTGGTTCGCACCAAAAACCGGTATTTACCATAGCAAACACGCCCCTGTGGACCTTCCCAACGACCCTTTTCTTGACCTTGTTTCCTTCATTTTTTCTCACCGCCATAATGGGGTTTCTGCCCTTGTTGATTCTTCATCTGGGTCTTCCATTTCCTACTCAAAGTTGCTACCTTTCGTCAAATCCTTGGCCTCTGGTCTTCACAAAATGGGTGTTTCACAAGGTGACGTGGTTATGCTTCTTCTCCCAAATTCCATTTACTACCCCGTTGTGTTATTGGGAGTTCTCTATCTCGGTGCTGTTGTTACACCAATGAATCCTCTTAGTAGTGTCTATGAAATACGCAGGCAGGTTTATGAGTGTGGTGTGAGTCTGGCCTTTACTGTGCCTGAAAATGAGAAGAAACTAGAGCCATTGGGTATTTCTGTTATTGCTGTGCCGGAAAATGAGAATGGTTTGAGGAATGGTTGTTTCTCATGCTTTTGTGACTTGATTTCTGGTGAGTTTGATTTGCCTCAGAGGCCACTCATTAAACAGGATGACATTGCGGGGATATTGTATTCTTCAGGGACTACTGGGATGAGCCAAGGTGTTGTTCTGTCCCATAATAATCTTGTTGCCATGGTTGAGCTTTTTGTGAGGTTTGAAGCCTCTCAATATAAAGGCTCTTGCTCCAGGAACGTCTATCTGGCTGTTTTGCCTATGTTTCATGTGTACGGCTTATCCTTATTTGCATTGGGATTGCTGTCTTTGGGTTCTACAATGGTTGTGATGACGAAATTTGACATAGATGAGGTCATCAGGGTGATTGATGAATATAAAGTTACACACTTTCCTGTTGTTCCACCCCTGTTGTCAGCATTGATAACGAGGGTAAAGCGTCTTGATAACAGTAAGTTGCAGAGTTTGATACAGGTATCCTGTGGTGCAGCACCTTTGAGCGTCGGAGTTATTGATGACTTTCTTCAAACTTTCCCTCATGTTGATTTTATACAGAGATACACGCAAGAAGCCATTTTGGGTATAAATCTCCGCTCCCCTTCTTTCTGCTTAAGTGCTTTTGAATTTTATGCAATGGCAAATAATAAAGACTTTAATTGTGCTGTTAATATTCACATCAAAAGTACTGCTGGACAAGGTTATGGAATGACTGAGTCAACTGCAGTAGGAACACGTGGCTTCAATACTGAAAAGTTTCGCAATTATTCTTCAATAGGGTTATTGGCTCCAAACATGGAGGCAAAAGTGGTAGACTGGAATACTGGTGCATTTTTGCCCCCAGGCAGCAGTGGTGAGCTTTGGTTGAGAGGACCTTCAATTATGACAGGATACTTGAATAACAAGGAAGCTACAATGTCAACAATTGATAAAGATGGTTGGCTACATACTGGAGATGTGGTCTATTTTGATTATGATGGATACTTACACATATCTGATCGCTTGAAAGATATAATCAAATATAAGGCCTTTCAGATTGCTCCTGCCGATTTGGAAGCTGTGTTAATTTTGCATCCTGAAATAGTTGATGTTGCTGTTACAGGTGCAATGGATGAAGAAACTGGGGAGATGCCAGTGGCATTTGTAGTAAGGAAGATTGGAAGTGTGCTGTCTCAGAAGCATGTTATGGATTATGTTGCTGAACAGGTTGCTCCATATAAGAAGGTTAGGAAAGTGTTCTTCACTGACAAGATACCAAGATCTGCAACTGGGAAGATCCTACGAAAACAGCTGAAGAATTTCTTGACTTCAAAACTATAATACATTTTTTCAGGACTCACATTGAAAAATTACAGCGGGCAATTTTAGAAAGTGGGTTATCATAGTTTTTTTATGGAATCAAGATGAGATCCTTTCATATATATGGG 1907 0.4111 MTPNVNCHMSLTHPHWFAPKTGIYHSKHAPVDLPNDPFLDLVSFIFSHRHNGVSALVDSSSGSSISYSKLLPFVKSLASGLHKMGVSQGDVVMLLLPNSIYYPVVLLGVLYLGAVVTPMNPLSSVYEIRRQVYECGVSLAFTVPENEKKLEPLGISVIAVPENENGLRNGCFSCFCDLISGEFDLPQRPLIKQDDIAGILYSSGTTGMSQGVVLSHNNLVAMVELFVRFEASQYKGSCSRNVYLAVLPMFHVYGLSLFALGLLSLGSTMVVMTKFDIDEVIRVIDEYKVTHFPVVPPLLSALITRVKRLDNSKLQSLIQVSCGAAPLSVGVIDDFLQTFPHVDFIQRYTQEAILGINLRSPSFCLSAFEFYAMANNKDFNCAVNIHIKSTAGQGYGMTESTAVGTRGFNTEKFRNYSSIGLLAPNMEAKVVDWNTGAFLPPGSSGELWLRGPSIMTGYLNNKEATMSTIDKDGWLHTGDVVYFDYDGYLHISDRLKDIIKYKAFQIAPADLEAVLILHPEIVDVAVTGAMDEETGEMPVAFVVRKIGSVLSQKHVMDYVAEQVAPYKKVRKVFFTDKIPRSATGKILRKQLKNFLTSKL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00391 599 Gene3D - 64 348 - -
Pste1g00391 599 Gene3D - 371 496 IPR042099 -
Pste1g00391 599 Pfam AMP-binding enzyme 390 501 IPR000873 -
Pste1g00391 599 Pfam AMP-binding enzyme 49 348 IPR000873 -
Pste1g00391 599 CDD 4CL 33 591 - -
Pste1g00391 599 Pfam AMP-binding enzyme C-terminal domain 511 585 IPR025110 -
Pste1g00391 599 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 593 - -
Pste1g00391 599 SUPERFAMILY Acetyl-CoA synthetase-like 48 595 - -
Pste1g00391 599 Gene3D - 67 215 - -
Pste1g00391 599 Gene3D - 497 597 IPR045851 -
Pste1g00391 599 FunFam 4-coumarate--CoA ligase 2 497 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00391 Pste-Chr1 1338581 1343081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00391 14 599 Monolignol Biosynthesis Gene Families AT4G19010 55.330 0.0 643