Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00371 GGTTGGAGGTTGGAGGTTGGAGGTTGGAGGTTGAGTTGAGTTGACGATAAGGATAAAGTTGAAAGTTAAAGGGTTTAGGGTTTAGATGGAAGCAGCGGTGGTGGACGTTGGGTCTAAGCTCGTAAAAGCGGGCTTTGCTATTCCTGACCAGACTCCCGCCATGATCATTCCCACTCAGATGAAACAAATGCTCGATGATGGACCAGTCAACGATAATTCACTGCCTGACAGTGTCACCGTTCATCCCGTCCTGCGAGGATTTATTAGAGATTGGGATGCCATTGAGGATTTGTTGCACTATGTTTTATATACTGGTCTTGGATGGGAAATTGGCAATGAAGGACAGATACTATTTACAGATCCACTTTCTACTCCTAAGGCCAACAAAGAACAGTTGGTGCAATTAATGTTTGAAACATTCAACATATCAGGCTTTTATGCCTCAGAACAAGCAGTGTTGTCACTATATGCCGTGGGACGCATCTCGGGCTGCACTGTTGATATTGGACATGGAAAAATAGATATTGCACCAGTAATTGAAGGTGCTGTTCACCACATTGCCTCAAGAAGATTTGAGTTTGGAGGTATTGATCTAACTAATTTCCTGGCTCAAGAACTTGGAAAGTCCAATCAACAAGTAAATATAAGCTTGTCTGATGTGGAGAAAATAAAAGAGCAATACTCGTGCTGTGCTGAAGATGAATTAGCTTATCAGAAGATCCAATATTCTTGTCCTGTGGAGAAGCACATCCTTCCTGATGGACAGGTCTGCTCTCTGAATTGCTGA 787 0.4295 MEAAVVDVGSKLVKAGFAIPDQTPAMIIPTQMKQMLDDGPVNDNSLPDSVTVHPVLRGFIRDWDAIEDLLHYVLYTGLGWEIGNEGQILFTDPLSTPKANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVHHIASRRFEFGGIDLTNFLAQELGKSNQQVNISLSDVEKIKEQYSCCAEDELAYQKIQYSCPVEKHILPDGQVCSLNC 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00371 233 SMART actin_3 1 233 IPR004000 -
Pste1g00371 233 Gene3D - 5 122 - -
Pste1g00371 233 CDD NBD_sugar-kinase_HSP70_actin 4 168 - -
Pste1g00371 233 SUPERFAMILY Actin-like ATPase domain 2 138 IPR043129 -
Pste1g00371 233 FunFam Actin-related protein 7 4 127 - -
Pste1g00371 233 PANTHER ACTIN 4 231 IPR004000 -
Pste1g00371 233 Gene3D Actin; Chain A, domain 4 173 206 - -
Pste1g00371 233 Gene3D - 123 172 - -
Pste1g00371 233 Pfam Actin 2 230 IPR004000 -
Pste1g00371 233 SUPERFAMILY Actin-like ATPase domain 131 231 IPR043129 -
Pste1g00371 233 PRINTS Actin signature 100 113 IPR004000 -
Pste1g00371 233 PRINTS Actin signature 217 233 IPR004000 -
Pste1g00371 233 PRINTS Actin signature 125 144 IPR004000 -
Pste1g00371 233 PRINTS Actin signature 45 67 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00371 Pste-Chr1 1294305 1296518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00371 5 233 Cytoskeleton Gene Families AT1G49240 32.520 3.90e-30 113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00371 1 1294305 1296518 Pste1g00371 1 1294305 1296518 ECH